Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 4e-12 >seq1 Length=5503185 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 25756 CCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCG 25815 |||| ||||||||| ||| | |||||| | || || | | |||||||||||| || Sbjct 1252009 CCCGTGTAGTCTGCGTGCATATGCGTGTATTTGGCACCTGAGTGCCTCCACTGGAAGCCA 1251950 Query 25816 TACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCT 25875 || | ||| || || || || || || | | || |||||| ||| | | | Sbjct 1251949 TAGATCGGCCCCAGATCCCCCTCCTCACGATCCTTAAAGCCATATGCATCGAGATATATA 1251890 Query 25876 CTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTG 25935 | |||| |||||| |||||||| || || ||| ||| || || |||| || || ||| Sbjct 1251889 CGAGAACTATTGGCATCCCAGATTTTAACTCCCCTCTTCGACAGGTCTTGGGCATTCGTG 1251830 Query 25936 GACCCTCTGACGAACCACAGCAGCTCC 25962 || || |||| |||||| || || ||| Sbjct 1251829 GATCCACTGATGAACCAGAGAAGTTCC 1251803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340133280465066