Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq112 132 3e-26 >seq112 Length=360945 Score = 132 bits (146), Expect = 3e-26 Identities = 337/510 (66%), Gaps = 2/510 (0%) Strand=Plus/Plus Query 3629 TATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATGTTATGGAGAAAG 3688 ||||||||||||||||| || || || || || ||||| || || || | ||||| ||| Sbjct 248736 TATTTTGCTGACGTATGTGCAGGACCTGGAGGATTCAGCGAGTACATACTCTGGAGGAAG 248795 Query 3689 AAATGGAATATCAAAGGTTATGGTATGACGTTACGCGaaaaaaaTGATTTTCAACTGAAC 3748 || ||| || |||||| | |||| | || | ||||| | ||| || || ||||| || Sbjct 248796 AAGTGGCATGCCAAAGGCTTTGGTTTTACCCTGCGCGACACAAACGACTTCAAACTGGAC 248855 Query 3749 AGATTT-TACGATAACTTTTCGGAAACTTTACACCCGTATTATGGTCCGCTTAACGATGG 3807 ||||| |||| | | | || || || ||||||| || ||||| |||| || Sbjct 248856 -GATTTCTACGCCGGCAATCCCGAGACATTTCACCCGTTCTACGGTCCAAAGGACGACGG 248914 Query 3808 TAATATCTACAATTCACAAAATCAGAAAGGTTTTTGTGAAATGATTATGAAAGATACCGA 3867 ||| ||||| || | | || ||| | | || | | || ||| | | ||| | Sbjct 248915 CAATGTCTACGATCCTGACAACCAGCAGGCCTTCCAGCAGCTAATAATGGAGCACACCAA 248974 Query 3868 AGGAAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAA 3927 || |||||| || || |||||| | |||||||| ||||| || ||||| || | Sbjct 248975 GGGCCTAGGTGTGCACTTCATGATGTCAGACGGTGGTTTCTCAGTGGAGGGCAAACAGGC 249034 Query 3928 TATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGAT 3987 || || || || | || || || |||| |||| || ||| | |||| |||| ||| Sbjct 249035 CATCCAGGAGATTCTCTCAAAGCAGCTGTACCTGTGCCAGTGTCTGGTTGCCTTGAAGAT 249094 Query 3988 CATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGC 4047 | | || ||||| | | || | ||||| ||||| | || ||||| || |||| Sbjct 249095 TGTCCAAAGGGGTGGCAACTTCGTCACAAAATTATTCGACCTCTTCACACCCTTCAGTGT 249154 Query 4048 TGGTTTAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTC 4107 || | ||||| | |||| || | || | | || | || ||||| || | | Sbjct 249155 CGGCCTCGTGTACCTCTTGTACAGGTGCTTCGAGAGGATCTCGATATTCAAGCCGAACAC 249214 Query 4108 ATCGCGACCGGCCAATTCTGAAAGATATTT 4137 ||| | || ||||| || || || ||||| Sbjct 249215 CTCGAGGCCAGCCAACTCCGAGAGGTATTT 249244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276550087942126