Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_006646.1 Length=31972 Score E Sequences producing significant alignments: (Bits) Value seq183 86.0 1e-12 >seq183 Length=158600 Score = 86.0 bits (94), Expect = 1e-12 Identities = 121/164 (74%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 9951 AGAAAAAATTATTAGATAGCT-CGGACTGGGATTCGAACCCAGAACCTTCCGAAGACATG 10009 |||||||||| ||||| | | ||| || | |||||||| | ||||||||| || | Sbjct 126358 AGAAAAAATTG--AGATATTTTCAGACCGGAAATCGAACCCGGGACCTTCCGATTACCAG 126415 Query 10010 TCGGCTACTCTACC-ATTTGAGCTATCCGG-TCTATACTAAATTTCCTTTCACTTATTCT 10067 |||| | |||| || | ||||||||||| | |||||| | ||||| |||| | | | Sbjct 126416 TCGGGTGCTCTCCCCAACTGAGCTATCCGAATATATACTGA-TTTCCATTCAAATCATTT 126474 Query 10068 ATATACATTAAGCCACACCGTCCATCTTACGGCTAGCATTTTTA 10111 | | ||| | ||||||||||| || |||||| | |||||||| Sbjct 126475 GTCAATATTGAACCACACCGTCCTTCATACGGCAACCATTTTTA 126518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 102187535541336