Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_006653.1 Length=26062 Score E Sequences producing significant alignments: (Bits) Value seq45 253 3e-63 seq122 199 7e-47 seq165 170 3e-38 seq54 143 4e-30 seq300 136 7e-28 seq71 132 8e-27 seq6 132 8e-27 seq7 107 3e-19 seq133 105 1e-18 seq8 102 1e-17 seq433 95.1 2e-15 seq150 91.5 2e-14 seq22 86.0 1e-12 seq76 84.2 4e-12 >seq45 Length=1006432 Score = 253 bits (280), Expect = 3e-63 Identities = 216/259 (83%), Gaps = 13/259 (5%) Strand=Plus/Plus Query 20585 TTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGGC 20644 |||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||| | Sbjct 985383 TTGACGCCTGCCCCC--GACCAGCAGCACTCGCTTCGCTCGTGCAGCAAATGTCGGGG-C 985439 Query 20645 AGGCATCAAT-TAT-TTTCAACGCA-ATTTTTAA------CGTACTTTCGACCGCATAGC 20695 |||| |||| || |||| | || | || |||||||||||||| || Sbjct 985440 AGGCGTCAAGATACCTTTCGATACATACGAACAAACAGTCCGTACTTTCGACCGGCTATG 985499 Query 20696 AAGAAAAATAGTATACACTACATGGGCAGAAATTTGAGAGCCCTGAACTGCGTGCCATGA 20755 |||||||||||||||||||||||||||||| | |||| | |||||||| ||| | |||| Sbjct 985500 AAGAAAAATAGTATACACTACATGGGCAGATAGTTGAAATCCCTGAACAGCGCGTTATGA 985559 Query 20756 TGCCCTCGGCTTCGCCTCGGGCA-CATGGCGCGCAGTGCAGGAATCTCAACTTTCTGCCC 20814 ||||||||||||||||||||||| ||| ||||| ||||||||| |||||||||||||| Sbjct 985560 TGCCCTCGGCTTCGCCTCGGGCATCATCACGCGCTGTGCAGGAAATTCAACTTTCTGCCC 985619 Query 20815 TTGTAGTGTAATATACTAT 20833 ||||||||||||||||||| Sbjct 985620 TTGTAGTGTAATATACTAT 985638 Score = 244 bits (270), Expect = 2e-60 Identities = 216/263 (82%), Gaps = 15/263 (6%) Strand=Plus/Plus Query 5220 TTGATGCCTGccccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGG 5279 |||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct 985383 TTGACGCCTGCCCCC---GACCAGCAGCACTCGCTTCGCTCGTGCAGCAAATGTCGGGG- 985438 Query 5280 CAGGCATCAAtttt--tttCAACGCA-ATTTTTAA------CGTACTTTCGACCGCATAG 5330 ||||| |||| | |||| | || | || |||||||||||||| || Sbjct 985439 CAGGCGTCAAGATACCTTTCGATACATACGAACAAACAGTCCGTACTTTCGACCGGCTAT 985498 Query 5331 TAAGAAAACTAGTATACACTACATGGGCAGAAATTTGAGAGCCCTGAACTGCGTGCCATG 5390 ||||||| |||||||||||||||||||||| | |||| | |||||||| ||| | ||| Sbjct 985499 GAAGAAAAATAGTATACACTACATGGGCAGATAGTTGAAATCCCTGAACAGCGCGTTATG 985558 Query 5391 ATGCCCTCGGCTTCGCCTCGGGCAT-ATGGCGCGCAGTGCAGGAATCTCAGACTTTCTGC 5449 ||||||||||||||||||||||||| || ||||| ||||||||| ||| ||||||||| Sbjct 985559 ATGCCCTCGGCTTCGCCTCGGGCATCATCACGCGCTGTGCAGGAAATTCA-ACTTTCTGC 985617 Query 5450 CCTTGTAGTGTAATATACTATTT 5472 ||||||||||||||||||||||| Sbjct 985618 CCTTGTAGTGTAATATACTATTT 985640 Score = 120 bits (132), Expect = 5e-23 Identities = 180/262 (69%), Gaps = 58/262 (22%) Strand=Plus/Minus Query 18651 AAATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGCGCCAT-AT 18709 ||||||||||||||||||||||||||||||| |||| ||||||||| ||||| || || Sbjct 985640 AAATAGTATATTACACTACAAGGGCAGAAAG-TTGAATTTCCTGCACAGCGCGTGATGAT 985582 Query 18710 GCCCGAGGCGAAGCCGA------------------------------------------- 18726 ||||||||||||||||| Sbjct 985581 GCCCGAGGCGAAGCCGAGGGCATCATAACGCGCTGTTCAGGGATTTCAACTATCTGCCCA 985522 Query 18727 -GTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACG------TTAAAAAT-TGC 18778 ||||||||||||| ||||||| || |||||||||||||| || | || Sbjct 985521 TGTAGTGTATACTATTTTTCTTCATAGCCGGTCGAAAGTACGGACTGTTTGTTCGTATGT 985462 Query 18779 GTTGaaa--aaaaTTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGC 18836 | |||| | |||| ||||| ||||||||||||| |||||||||||||||||||||| Sbjct 985461 ATCGAAAGGTATCTTGACGCCTG-CCCCGACATTTGCTGCACGAGCGAAGCGAGTGCTGC 985403 Query 18837 TGGTCgggggggCAGGCATCAA 18858 ||||| |||||||||| |||| Sbjct 985402 TGGTC--GGGGGCAGGCGTCAA 985383 >seq122 Length=326076 Score = 199 bits (220), Expect = 7e-47 Identities = 204/259 (79%), Gaps = 17/259 (7%) Strand=Plus/Minus Query 20585 TTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGGC 20644 ||||||||||||||| | |||||| ||| |||| ||||||| |||||||| |||| Sbjct 259087 TTGATGCCTGCCCCCGGG--CAGCAGTACTGGCTTTGCTCGTGTCGCAAATG----GGGC 259034 Query 20645 AGGCATCAAT-TAT-TTTCAACGCA-ATTTTTAA------CGTACTTTCGACCGCATAGC 20695 | |||||||| ||| |||||| ||| | || || | |||||||| | | || Sbjct 259033 AAGCATCAATATATCTTTCAATGCACACTTGCAAGCAGTCCATACTTTCGTCTGGGTATG 258974 Query 20696 AAGAAAAATAGTATACACTACATGGGCAGAAATTTGAGAGCCCTGAACTGCGTGCCATGA 20755 ||||| |||||||||||||||| | |||| | |||| | ||||||| ||| ||||| Sbjct 258973 AAGAACAATAGTATACACTACAAGAACAGATAGTTGAAAATCCTGAACAGCGCATCATGA 258914 Query 20756 TGCCCTCGGCTTCGCCTCGGGCA-CATGGCGCGCAGTGCAGGAATCTCAACTTTCTGCCC 20814 ||| ||||||||||||||||| |||| ||||||||||||||| ||||| |||||||| Sbjct 258913 CGCC-TCGGCTTCGCCTCGGGCTGCATGACGCGCAGTGCAGGAAATTCAACGTTCTGCCC 258855 Query 20815 TTGTAGTGTAATATACTAT 20833 ||||||||| ||||||||| Sbjct 258854 TTGTAGTGTGATATACTAT 258836 Score = 179 bits (198), Expect = 6e-41 Identities = 201/262 (77%), Gaps = 19/262 (7%) Strand=Plus/Minus Query 5220 TTGATGCCTGccccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGG 5279 ||||||||||||||| | |||||| ||| |||| ||||||| |||||||| ||| Sbjct 259087 TTGATGCCTGCCCCC---GGGCAGCAGTACTGGCTTTGCTCGTGTCGCAAATG----GGG 259035 Query 5280 CAGGCATCAAttttt--ttCAACGCA-ATTTTTAA------CGTACTTTCGACCGCATAG 5330 || |||||||| | | ||||| ||| | || || | |||||||| | | || Sbjct 259034 CAAGCATCAATATATCTTTCAATGCACACTTGCAAGCAGTCCATACTTTCGTCTGGGTAT 258975 Query 5331 TAAGAAAACTAGTATACACTACATGGGCAGAAATTTGAGAGCCCTGAACTGCGTGCCATG 5390 ||||| | |||||||||||||| | |||| | |||| | ||||||| ||| |||| Sbjct 258974 GAAGAACAATAGTATACACTACAAGAACAGATAGTTGAAAATCCTGAACAGCGCATCATG 258915 Query 5391 ATGCCCTCGGCTTCGCCTCGGGC-ATATGGCGCGCAGTGCAGGAATCTCAGACTTTCTGC 5449 | | ||||||||||||||||||| ||| ||||||||||||||| ||| || |||||| Sbjct 258914 ACG-CCTCGGCTTCGCCTCGGGCTGCATGACGCGCAGTGCAGGAAATTCA-ACGTTCTGC 258857 Query 5450 CCTTGTAGTGTAATATACTATT 5471 ||||||||||| |||||||||| Sbjct 258856 CCTTGTAGTGTGATATACTATT 258835 Score = 91.5 bits (100), Expect = 2e-14 Identities = 68/77 (88%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 18652 AATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGCGCCAT-ATG 18710 |||||||||| ||||||||||||||||| | |||| ||||||||||||||| ||| | Sbjct 258835 AATAGTATATCACACTACAAGGGCAGAACG-TTGAATTTCCTGCACTGCGCGTCATGCAG 258893 Query 18711 CCCGAGGCGAAGCCGAG 18727 ||||||||||||||||| Sbjct 258894 CCCGAGGCGAAGCCGAG 258910 >seq165 Length=192090 Score = 170 bits (188), Expect = 3e-38 Identities = 199/262 (76%), Gaps = 19/262 (7%) Strand=Plus/Minus Query 20585 TTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGGC 20644 |||| |||||||||| ||||||||||| | ||| || |||||| ||||||||||| | Sbjct 169706 TTGACGCCTGCCCCC--GACCAGCAGCAATTGCTCCGTTCGTGCAGCAAATGTCGGCA-C 169650 Query 20645 AGGCATCAAT-TAT-TTTCAA--CGCAATTTTTAAC-----GTACTTTCGACCGCATAGC 20695 |||| |||| || |||| | | || | ||| ||||||||||||| || Sbjct 169649 AGGCGTCAAGGTACCTTTCGATACACACGAATCAACAGTCTGTACTTTCGACCGGCTATG 169590 Query 20696 AAGAAAAATAGTATACACTACATGGGCAGAAATTTGAGAGCCCTGAACTGCGTGCCATGA 20755 ||||||||| |||||||||||||||| ||| | |||| | |||||| | ||| | |||| Sbjct 169589 AAGAAAAATGGTATACACTACATGGGTAGATAGTTGAAATCCCTGACCAGCGCGTTATGA 169530 Query 20756 TGCCCTCGGCTTCGCCTCGGGCA-CATGGCGCGCAGTGCAGGAATCTCAACTTTCTGCCC 20814 | | ||||||||||||| |||| |||| |||||||| |||||||||||||| Sbjct 169529 T------TGTTTCGCCTCGGGCATCATGACGCGGTGTGCAGGAGATTCAACTTTCTGCCC 169476 Query 20815 TTGTAGTGTAATATACTATATC 20836 |||||||||||| ||||| || Sbjct 169475 GTGTAGTGTAATACACTATTTC 169454 Score = 161 bits (178), Expect = 2e-35 Identities = 198/264 (75%), Gaps = 21/264 (8%) Strand=Plus/Minus Query 5220 TTGATGCCTGccccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGG 5279 |||| |||||||||| ||||||||||| | ||| || |||||| ||||||||||| Sbjct 169706 TTGACGCCTGCCCCC---GACCAGCAGCAATTGCTCCGTTCGTGCAGCAAATGTCGGCA- 169651 Query 5280 CAGGCATCAAtttt--tttCAA--CGCAATTTTTAAC-----GTACTTTCGACCGCATAG 5330 ||||| |||| | |||| | | || | ||| ||||||||||||| || Sbjct 169650 CAGGCGTCAAGGTACCTTTCGATACACACGAATCAACAGTCTGTACTTTCGACCGGCTAT 169591 Query 5331 TAAGAAAACTAGTATACACTACATGGGCAGAAATTTGAGAGCCCTGAACTGCGTGCCATG 5390 ||||||| | |||||||||||||||| ||| | |||| | |||||| | ||| | ||| Sbjct 169590 GAAGAAAAATGGTATACACTACATGGGTAGATAGTTGAAATCCCTGACCAGCGCGTTATG 169531 Query 5391 ATGCCCTCGGCTTCGCCTCGGGCAT-ATGGCGCGCAGTGCAGGAATCTCAGACTTTCTGC 5449 || | |||||||||||||| ||| |||| |||||||| ||| ||||||||| Sbjct 169530 AT------TGTTTCGCCTCGGGCATCATGACGCGGTGTGCAGGAGATTCA-ACTTTCTGC 169478 Query 5450 CCTTGTAGTGTAATATACTATTTC 5473 || |||||||||||| |||||||| Sbjct 169477 CCGTGTAGTGTAATACACTATTTC 169454 Score = 80.6 bits (88), Expect = 4e-11 Identities = 63/73 (86%), Gaps = 2/73 (3%) Strand=Plus/Plus Query 18650 GAAATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGCGCCAT-A 18708 |||||||| |||||||||||| |||||||||| |||| |||||||| |||| ||| | Sbjct 169454 GAAATAGTGTATTACACTACACGGGCAGAAAG-TTGAATCTCCTGCACACCGCGTCATGA 169512 Query 18709 TGCCCGAGGCGAA 18721 ||||||||||||| Sbjct 169513 TGCCCGAGGCGAA 169525 >seq54 Length=895341 Score = 143 bits (158), Expect = 4e-30 Identities = 143/181 (79%), Gaps = 11/181 (6%) Strand=Plus/Minus Query 20601 cGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGGCAGGCATCAAT-TAT-T 20658 |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| || | Sbjct 223412 CGACCAGCAGCACTCGCTTCGCTCATGCAGCAAATGTCGGGG-CAGGCATCAATATACCT 223354 Query 20659 TTCAACGCAATTTTTAA-------CGTACTTTCGACCGCATAGCAAGAAAAATAGTATAC 20711 ||| | || || |||||||||| ||| || || ||||||||||||| Sbjct 223353 TTCGATACACGCGGAAAAACCGTCCGTACTTTCGGCCGACTATGAA-AAAAATAGTATAC 223295 Query 20712 ACTACATGGGCAGAAATTTGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCC 20771 ||||||||||| || |||||| | ||| |||| ||| | ||||||||||||| |||| || Sbjct 223294 ACTACATGGGCTGATATTTGAAATCCCGGAACAGCGCGTCATGATGCCCTCGACTTCACC 223235 Query 20772 T 20772 | Sbjct 223234 T 223234 Score = 138 bits (152), Expect = 2e-28 Identities = 141/181 (78%), Gaps = 11/181 (6%) Strand=Plus/Minus Query 5237 cGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGGCAGGCATCAAtttt--t 5294 |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| | | Sbjct 223412 CGACCAGCAGCACTCGCTTCGCTCATGCAGCAAATGTCGGGG-CAGGCATCAATATACCT 223354 Query 5295 ttCAACGCAATTTTTAA-------CGTACTTTCGACCGCATAGTAAGAAAACTAGTATAC 5347 ||| | || || |||||||||| ||| || || |||| |||||||| Sbjct 223353 TTCGATACACGCGGAAAAACCGTCCGTACTTTCGGCCGACTATGAAAAAAA-TAGTATAC 223295 Query 5348 ACTACATGGGCAGAAATTTGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCC 5407 ||||||||||| || |||||| | ||| |||| ||| | ||||||||||||| |||| || Sbjct 223294 ACTACATGGGCTGATATTTGAAATCCCGGAACAGCGCGTCATGATGCCCTCGACTTCACC 223235 Query 5408 T 5408 | Sbjct 223234 T 223234 Score = 82.4 bits (90), Expect = 1e-11 Identities = 96/125 (77%), Gaps = 11/125 (9%) Strand=Plus/Plus Query 18727 GTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTTAAAAATT---GCGTTGa 18783 ||||||||||||| |||| | | || ||| |||||||||| || |||| | Sbjct 223290 GTAGTGTATACTATTTTTTTCA-TAGTCGGCCGAAAGTACGGACGGTTTTTCCGCGTGTA 223348 Query 18784 ---aaa---aaaTTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCT 18837 ||| | ||||||||||||||| ||||||||| ||| ||||||||||||||||||| Sbjct 223349 TCGAAAGGTATATTGATGCCTGCCCC-GACATTTGCTGCATGAGCGAAGCGAGTGCTGCT 223407 Query 18838 GGTCg 18842 ||||| Sbjct 223408 GGTCG 223412 >seq300 Length=70609 Score = 136 bits (150), Expect = 7e-28 Identities = 128/162 (79%), Gaps = 7/162 (4%) Strand=Plus/Plus Query 20676 CGTACTTTCGACCGCATAGCAAGAAAAATAGTATACACTACATGGGCAGAAATTTGAGAG 20735 |||||||||||||| || ||| ||||||| |||||||| |||||| | | |||| | Sbjct 5485 CGTACTTTCGACCGGCTATGAAGGGAAATAGTGTACACTACGTGGGCAAATAGTTGAAAT 5544 Query 20736 CCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCA-CATGGCGCGCAGTGCA 20794 | |||||| ||| | ||||| | ||| ||||||||| |||| ||||| |||| Sbjct 5545 CTCTGAACAGCGCGTTATGATTAC------TTCACCTCGGGCATCATGACGCGCTATGCA 5598 Query 20795 GGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTATATC 20836 |||| ||||||||||||||||||||||||||||||||| || Sbjct 5599 GGAAATTCAACTTTCTGCCCTTGTAGTGTAATATACTATTTC 5640 Score = 132 bits (146), Expect = 8e-27 Identities = 129/164 (79%), Gaps = 8/164 (5%) Strand=Plus/Plus Query 5312 CGTACTTTCGACCGCATAGTAAGAAAACTAGTATACACTACATGGGCAGAAATTTGAGAG 5371 |||||||||||||| || ||| || |||| |||||||| |||||| | | |||| | Sbjct 5485 CGTACTTTCGACCGGCTATGAAGGGAAATAGTGTACACTACGTGGGCAAATAGTTGAAAT 5544 Query 5372 CCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCAT-ATGGCGCGCAGTGCA 5430 | |||||| ||| | ||||| | ||| |||||||||| ||| ||||| |||| Sbjct 5545 CTCTGAACAGCGCGTTATGATTAC------TTCACCTCGGGCATCATGACGCGCTATGCA 5598 Query 5431 GGAATCTCAGACTTTCTGCCCTTGTAGTGTAATATACTATTTCT 5474 |||| ||| |||||||||||||||||||||||||||||||||| Sbjct 5599 GGAAATTCA-ACTTTCTGCCCTTGTAGTGTAATATACTATTTCT 5641 Score = 93.3 bits (102), Expect = 7e-15 Identities = 67/75 (89%), Gaps = 2/75 (3%) Strand=Plus/Minus Query 18649 AGAAATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGCGCCAT- 18707 ||||||||||||||||||||||||||||||||| |||| |||||||| ||||| ||| Sbjct 5641 AGAAATAGTATATTACACTACAAGGGCAGAAAG-TTGAATTTCCTGCATAGCGCGTCATG 5583 Query 18708 ATGCCCGAGGCGAAG 18722 |||||||||| |||| Sbjct 5582 ATGCCCGAGGTGAAG 5568 >seq71 Length=708426 Score = 132 bits (146), Expect = 8e-27 Identities = 195/274 (71%), Gaps = 29/274 (11%) Strand=Plus/Plus Query 20586 TGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGGCA 20645 ||| |||||||||| | ||||||||||||||||||||||||| ||||||||| |||||| Sbjct 681452 TGACGCCTGCCCCC--GGCCAGCAGCACTCGCTTCGCTCGTGCAGCAAATGTC-GGGGCA 681508 Query 20646 GGCATCA--ATTATTTTCAACGCA-ATTTTTAA------CGTACTTTCGACCGCATAGCA 20696 ||| ||| || |||| | || | || |||||||||||||| || | Sbjct 681509 GGCGTCAAGATAGCTTTCGATACACACGAACAAACAGTCCGTACTTTCGACCGGCTATGA 681568 Query 20697 AGAAAAATAGTATACACTACATGGGCAGAAATTTGAGAGCCCTGAACTGCGTGCCATGAT 20756 ||||||||||||||||||||||||||||| | || | | | |||||| | | | ||||| Sbjct 681569 AGAAAAATAGTATACACTACATGGGCAGATAGTTAAAACCGCTGAACAGTGCGTTATGAT 681628 Query 20757 GC----------------CCTCGGCTTCGCCTCGGGC-ACATGGCGCGCAGTGCAGGAAT 20799 || | | | | || || ||| ||||| |||| |||| Sbjct 681629 GCGATATTAATTAACAATAGTATATTACACTACGCGCGTCATCACGCGCTGTGCGGGAAA 681688 Query 20800 CTCAACTTTCTGCCCTTGTAGTGTAATATACTAT 20833 || ||||||||||||| |||||||||||||||| Sbjct 681689 TTCGACTTTCTGCCCTTCTAGTGTAATATACTAT 681722 Score = 127 bits (140), Expect = 3e-25 Identities = 196/277 (71%), Gaps = 31/277 (11%) Strand=Plus/Plus Query 5221 TGATGCCTGccccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGGC 5280 ||| |||||||||| | ||||||||||||||||||||||||| ||||||||| ||||| Sbjct 681452 TGACGCCTGCCCCC---GGCCAGCAGCACTCGCTTCGCTCGTGCAGCAAATGTC-GGGGC 681507 Query 5281 AGGCATCA--AtttttttCAACGCA-ATTTTTAA------CGTACTTTCGACCGCATAGT 5331 |||| ||| || |||| | || | || |||||||||||||| || Sbjct 681508 AGGCGTCAAGATAGCTTTCGATACACACGAACAAACAGTCCGTACTTTCGACCGGCTATG 681567 Query 5332 AAGAAAACTAGTATACACTACATGGGCAGAAATTTGAGAGCCCTGAACTGCGTGCCATGA 5391 ||||||| |||||||||||||||||||||| | || | | | |||||| | | | |||| Sbjct 681568 AAGAAAAATAGTATACACTACATGGGCAGATAGTTAAAACCGCTGAACAGTGCGTTATGA 681627 Query 5392 TGC----------------CCTCGGCTTCGCCTCGGGCAT-ATGGCGCGCAGTGCAGGAA 5434 ||| | | | | || || | || ||||| |||| |||| Sbjct 681628 TGCGATATTAATTAACAATAGTATATTACACTACGCGCGTCATCACGCGCTGTGCGGGAA 681687 Query 5435 TCTCAGACTTTCTGCCCTTGTAGTGTAATATACTATT 5471 || |||||||||||||| ||||||||||||||||| Sbjct 681688 ATTC-GACTTTCTGCCCTTCTAGTGTAATATACTATT 681723 Score = 96.9 bits (106), Expect = 6e-16 Identities = 108/140 (77%), Gaps = 12/140 (9%) Strand=Plus/Minus Query 18727 GTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACG------TTAAAAAT-TGCG 18779 ||||||||||||| ||||||| || |||||||||||||| || | || Sbjct 681588 GTAGTGTATACTATTTTTCTTCATAGCCGGTCGAAAGTACGGACTGTTTGTTCGTGTGTA 681529 Query 18780 TTGaaaaaaaT--TGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCT 18837 | |||| || ||| ||||||||| ||||||||| ||||||||||||||||||||||| Sbjct 681528 TCGAAAGCTATCTTGACGCCTGCCCC-GACATTTGCTGCACGAGCGAAGCGAGTGCTGCT 681470 Query 18838 GGTCgggggggCAGGCATCA 18857 || | |||||||||| ||| Sbjct 681469 GGCC--GGGGGCAGGCGTCA 681452 >seq6 Length=2247010 Score = 132 bits (146), Expect = 8e-27 Identities = 123/157 (78%), Gaps = 7/157 (4%) Strand=Plus/Minus Query 20677 GTACTTTCGACCGCATAGCAAGAAAAATAGTATACACTACATGGGCAGAAATTTGAGAGC 20736 |||||| |||||| || |||| ||||||||||||| | | || |||| | |||| | | Sbjct 2068048 GTACTTCCGACCGGGTATAAAGAGAAATAGTATACACCATACGGACAGATAGTTGAAATC 2067989 Query 20737 CCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCACATGGCGCGCAGTGCAGG 20796 ||||||| ||| || ||||||||||||||||| | |||||| |||| ||||| Sbjct 2067988 CCTGAACAGCGCGCAATGATGCCCTCGGCTTC-------GAGCATGGCATGCAGGGCAGG 2067936 Query 20797 AATCTCAACTTTCTGCCCTTGTAGTGTAATATACTAT 20833 | |||||||||||| ||||||||| |||||||||| Sbjct 2067935 AGATTCAACTTTCTGCTCTTGTAGTGAAATATACTAT 2067899 Score = 123 bits (136), Expect = 4e-24 Identities = 126/162 (78%), Gaps = 8/162 (5%) Strand=Plus/Minus Query 5313 GTACTTTCGACCGCATAGTAAGAAAACTAGTATACACTACATGGGCAGAAATTTGAGAGC 5372 |||||| |||||| || |||| || |||||||||| | | || |||| | |||| | | Sbjct 2068048 GTACTTCCGACCGGGTATAAAGAGAAATAGTATACACCATACGGACAGATAGTTGAAATC 2067989 Query 5373 CCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCATATGGCGCGCAGTGCAGG 5432 ||||||| ||| || ||||||||||||||| ||| || ||||| |||| ||||| Sbjct 2067988 CCTGAACAGCGCGCAATGATGCCCTCGGCT-----TCGAGC--ATGGCATGCAGGGCAGG 2067936 Query 5433 AATCTCAGACTTTCTGCCCTTGTAGTGTAATATACTATTTCT 5474 | ||| ||||||||| ||||||||| ||||||||||| || Sbjct 2067935 AGATTCA-ACTTTCTGCTCTTGTAGTGAAATATACTATTCCT 2067895 >seq7 Length=2059422 Score = 107 bits (118), Expect = 3e-19 Identities = 159/219 (73%), Gaps = 21/219 (10%) Strand=Plus/Minus Query 18649 AGAAATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGCGCCATA 18708 |||||||||||||||||||||||||||||||||| || ||||||| | | | Sbjct 1663581 AGAAATAGTATATTACACTACAAGGGCAGAAAGTA-GAATTTCCTGCTCGAC------TT 1663529 Query 18709 TGCCCGAGGCG--AAGCCGAGTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTAC 18766 |||| ||| | | || || | |||||| ||||||| | |||| | |||||| Sbjct 1663528 TGCCTCGGGCAGCATGACGCGTTGATCATACTATTTTTCTTCAAAGCCGGTTGCAAGTAC 1663469 Query 18767 G------TTAAAAAT-TGCGTTGaaaaaaaT--TGATGCCTGCCCCCGACATTTGCGGCA 18817 | || | | ||| | |||| | || |||| |||||| | ||||||||||||| Sbjct 1663468 GGACTGATTGCATGTGTGCATCGAAAGATATATTGATACCTGCCTC-GACATTTGCGGCA 1663410 Query 18818 CGAGCGAAGCGAGTGCTGCTGGTCgggggggCAGGCATC 18856 ||||||||| |||||||||||| | |||||||||| || Sbjct 1663409 CGAGCGAAGTGAGTGCTGCTGGCC--GGGGGCAGGCGTC 1663373 Score = 87.8 bits (96), Expect = 3e-13 Identities = 119/158 (75%), Gaps = 16/158 (10%) Strand=Plus/Plus Query 20561 TAATATCTTTATTGACAGGTGTATTTGATGCCTGcccccccGACCAGCAGCACTCGCTTC 20620 |||||||||| || | | ||| || |||||||||| | |||||||||||| |||| Sbjct 1663351 TAATATCTTTTTT---ATTTTTATC-GACGCCTGCCCCC--GGCCAGCAGCACTCACTTC 1663404 Query 20621 GCTCGTGCCGCAAATGTCGGGGGCAGGCATCAAT-TAT-TTTCAACGCA-ATTTTTAA-- 20675 |||||||||||||||||| | |||||| |||||| ||| |||| | ||| | | || Sbjct 1663405 GCTCGTGCCGCAAATGTC-GAGGCAGGTATCAATATATCTTTCGATGCACACATGCAATC 1663463 Query 20676 ----CGTACTTTCGACCGCATAGCAAGAAAAATAGTAT 20709 ||||||| | |||| | |||||||||||||| Sbjct 1663464 AGTCCGTACTTGCAACCGGCTTTGAAGAAAAATAGTAT 1663501 Score = 84.2 bits (92), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 20761 TCGGCTTCGCCTCGGGCA-CATGGCGCGCAGTGCAGGAATCTCAACTTTCTGCCCTTGTA 20819 || ||||||||||||||| |||| || |||||||||||| ||||||||| | |||||| Sbjct 1103398 TCCGCTTCGCCTCGGGCAGCATGACGTGCAGTGCAGGAAATGCAACTTTCTACGCTTGTA 1103457 Query 20820 GTGTAATATACTA 20832 || |||||||||| Sbjct 1103458 GTATAATATACTA 1103470 >seq133 Length=284610 Score = 105 bits (116), Expect = 1e-18 Identities = 161/227 (71%), Gaps = 32/227 (14%) Strand=Plus/Plus Query 18649 AGAAATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGCGCCATA 18708 || |||||||||||| || |||| ||||||||||| || ||||||||||| ||| Sbjct 61870 AGCAATAGTATATTATACGACAATGGCAGAAAGTT-GAATTTCCTGCACTGTGCG----- 61923 Query 18709 TGCCCGAGGCGAAGCCGAGT--------AGTGTATACTAGTTTTCTTACTATGCGGTCGA 18760 |||||||||||||| ||| |||||| ||| ||| || ||||| Sbjct 61924 ------AGGCGAAGCCGAGTGCCCTTACAGTCTATACTGTTTTGCTTCATACCTCGTCGA 61977 Query 18761 AAGTACG------TTAAAAAT-TGCGTTGaaaaaaaT--TGATGCCTGCCCCCGACATTT 18811 | |||| || | | ||| |||| ||| || | ||| |||||| || |||| Sbjct 61978 ACATACGAACTGATTGCATGTGTGCATTGAGAAATATATTAATGTCTGCCCG-GAAATTT 62036 Query 18812 GCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggCAGGCATCAA 18858 ||||||||||||| |||||| ||||| | | ||||||||||||||| Sbjct 62037 GCGGCACGAGCGATGCGAGTCCTGCT--TAGCGGGGGCAGGCATCAA 62081 >seq8 Length=1915603 Score = 102 bits (112), Expect = 1e-17 Identities = 66/71 (93%), Gaps = 1/71 (1%) Strand=Plus/Plus Query 20763 GGCTTCGCCTCGGGCA-CATGGCGCGCAGTGCAGGAATCTCAACTTTCTGCCCTTGTAGT 20821 |||||| ||||| ||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 182354 GGCTTCTCCTCGCGCAGCATGGCGCGCAGTGCAGGAAATTCAACTTTCTGCCCTTGTAGT 182413 Query 20822 GTAATATACTA 20832 ||||||||||| Sbjct 182414 GTAATATACTA 182424 Score = 91.5 bits (100), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 2/72 (3%) Strand=Plus/Plus Query 5399 GGCTTCGCCTCGGGCAT-ATGGCGCGCAGTGCAGGAATCTCAGACTTTCTGCCCTTGTAG 5457 |||||| ||||| ||| ||||||||||||||||||| ||| ||||||||||||||||| Sbjct 182354 GGCTTCTCCTCGCGCAGCATGGCGCGCAGTGCAGGAAATTCA-ACTTTCTGCCCTTGTAG 182412 Query 5458 TGTAATATACTA 5469 |||||||||||| Sbjct 182413 TGTAATATACTA 182424 Score = 91.5 bits (100), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 2/72 (3%) Strand=Plus/Minus Query 18654 TAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGCGCCAT-ATGCC 18712 |||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||| Sbjct 182424 TAGTATATTACACTACAAGGGCAGAAAG-TTGAATTTCCTGCACTGCGCGCCATGCTGCG 182366 Query 18713 CGAGGCGAAGCC 18724 ||||| |||||| Sbjct 182365 CGAGGAGAAGCC 182354 >seq433 Length=20622 Score = 95.1 bits (104), Expect = 2e-15 Identities = 68/77 (88%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 20757 GCCCTCGGCTTCGCCTCGGGCA-CATGGCGCGCAGTGCAGGAATCTCAACTTTCTGCCCT 20815 |||||||||||||||||| ||| ||| ||||| |||| |||| ||||||||||||||| Sbjct 5408 GCCCTCGGCTTCGCCTCGAGCATCATCACGCGCTGTGCCGGAAATTCAACTTTCTGCCCT 5467 Query 20816 TGTAGTGTAATATACTA 20832 ||| ||||||||||||| Sbjct 5468 TGTTGTGTAATATACTA 5484 Score = 89.7 bits (98), Expect = 9e-14 Identities = 70/81 (86%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 5393 GCCCTCGGCTTCGCCTCGGGCAT-ATGGCGCGCAGTGCAGGAATCTCAGACTTTCTGCCC 5451 |||||||||||||||||| |||| || ||||| |||| |||| ||| ||||||||||| Sbjct 5408 GCCCTCGGCTTCGCCTCGAGCATCATCACGCGCTGTGCCGGAAATTCA-ACTTTCTGCCC 5466 Query 5452 TTGTAGTGTAATATACTATTT 5472 |||| ||||||||||||| || Sbjct 5467 TTGTTGTGTAATATACTAATT 5487 Score = 84.2 bits (92), Expect = 4e-12 Identities = 67/78 (86%), Gaps = 2/78 (3%) Strand=Plus/Minus Query 18651 AAATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGCGCCAT-AT 18709 || ||||||||||||| |||||||||||||| |||| |||| |||| ||||| || || Sbjct 5487 AATTAGTATATTACACAACAAGGGCAGAAAG-TTGAATTTCCGGCACAGCGCGTGATGAT 5429 Query 18710 GCCCGAGGCGAAGCCGAG 18727 || ||||||||||||||| Sbjct 5428 GCTCGAGGCGAAGCCGAG 5411 >seq150 Length=228345 Score = 91.5 bits (100), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 20766 TTCGCCTCGGGCA-CATGGCGCGCAGTGCAGGAATCTCAACTTTCTGCCCTTGTAGTGTA 20824 ||||||||||||| |||| ||||| |||||||| |||||||||||||| ||||||||| Sbjct 221489 TTCGCCTCGGGCATCATGACGCGCTGTGCAGGAGATTCAACTTTCTGCCCGTGTAGTGTA 221430 Query 20825 ATATACTATATC 20836 ||||||||| || Sbjct 221429 ATATACTATTTC 221418 Score = 89.7 bits (98), Expect = 9e-14 Identities = 65/73 (89%), Gaps = 2/73 (3%) Strand=Plus/Plus Query 18650 GAAATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGCGCCAT-A 18708 ||||||||||||||||||||| |||||||||| |||| |||||||| ||||| ||| | Sbjct 221418 GAAATAGTATATTACACTACACGGGCAGAAAG-TTGAATCTCCTGCACAGCGCGTCATGA 221476 Query 18709 TGCCCGAGGCGAA 18721 ||||||||||||| Sbjct 221477 TGCCCGAGGCGAA 221489 Score = 89.7 bits (98), Expect = 9e-14 Identities = 65/73 (89%), Gaps = 2/73 (3%) Strand=Plus/Minus Query 5402 TTCGCCTCGGGCAT-ATGGCGCGCAGTGCAGGAATCTCAGACTTTCTGCCCTTGTAGTGT 5460 |||||||||||||| ||| ||||| |||||||| ||| ||||||||||| |||||||| Sbjct 221489 TTCGCCTCGGGCATCATGACGCGCTGTGCAGGAGATTCA-ACTTTCTGCCCGTGTAGTGT 221431 Query 5461 AATATACTATTTC 5473 ||||||||||||| Sbjct 221430 AATATACTATTTC 221418 >seq22 Length=1453673 Score = 86.0 bits (94), Expect = 1e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 20678 TACTTTCGACCGCATAGCAAGAAAAATAGTATACACTACATGGGCAGAAATTTGAGAGCC 20737 |||||||||||| || |||||||||| ||||||||| | ||||||| |||| | || Sbjct 604901 TACTTTCGACCGGGTATAAAGAAAAATAATATACACTATACGGGCAGATCGTTGAAATCC 604960 Query 20738 CTGAACTGCGTGCCATGATGCCCTC 20762 |||||| ||| ||||||||||| || Sbjct 604961 CTGAACCGCGCGCCATGATGCCGTC 604985 Score = 82.4 bits (90), Expect = 1e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 5314 TACTTTCGACCGCATAGTAAGAAAACTAGTATACACTACATGGGCAGAAATTTGAGAGCC 5373 |||||||||||| || ||||||| || ||||||||| | ||||||| |||| | || Sbjct 604901 TACTTTCGACCGGGTATAAAGAAAAATAATATACACTATACGGGCAGATCGTTGAAATCC 604960 Query 5374 CTGAACTGCGTGCCATGATGCCCTC 5398 |||||| ||| ||||||||||| || Sbjct 604961 CTGAACCGCGCGCCATGATGCCGTC 604985 >seq76 Length=671789 Score = 84.2 bits (92), Expect = 4e-12 Identities = 62/70 (89%), Gaps = 3/70 (4%) Strand=Plus/Minus Query 18789 aTTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCggggggg 18848 ||||||||||||||| ||||||||||||||||||||||| |||| |||||||| || | Sbjct 545527 ATTGATGCCTGCCCC-GACATTTGCGGCACGAGCGAAGCTAGTGTTGCTGGTC--AGGAG 545471 Query 18849 CAGGCATCAA 18858 ||||| |||| Sbjct 545470 CAGGCCTCAA 545461 Score = 84.2 bits (92), Expect = 4e-12 Identities = 62/70 (89%), Gaps = 3/70 (4%) Strand=Plus/Plus Query 20585 TTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGGC 20644 |||| |||||| || |||||||| |||| ||||||||||||||||||||||| ||||| Sbjct 545461 TTGAGGCCTGCTCCT--GACCAGCAACACTAGCTTCGCTCGTGCCGCAAATGTC-GGGGC 545517 Query 20645 AGGCATCAAT 20654 |||||||||| Sbjct 545518 AGGCATCAAT 545527 Score = 82.4 bits (90), Expect = 1e-11 Identities = 62/71 (87%), Gaps = 4/71 (6%) Strand=Plus/Plus Query 5220 TTGATGCCTGccccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGG 5279 |||| |||||| || |||||||| |||| ||||||||||||||||||||||| |||| Sbjct 545461 TTGAGGCCTGCTCCT---GACCAGCAACACTAGCTTCGCTCGTGCCGCAAATGTC-GGGG 545516 Query 5280 CAGGCATCAAt 5290 ||||||||||| Sbjct 545517 CAGGCATCAAT 545527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 83278996632150