Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq109 147 2e-30 seq37 125 6e-24 seq425 123 2e-23 seq7 100 2e-16 seq17 98.7 8e-16 seq113 87.8 2e-12 >seq109 Length=386716 Score = 147 bits (162), Expect = 2e-30 Identities = 354/531 (67%), Gaps = 15/531 (3%) Strand=Plus/Minus Query 129696 AATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGC 129755 |||||||||||||||||| || ||| |||| | | |||||| || || || | Sbjct 265623 AATCGAGGCCAAATTGCAAACAGCAATTTCATCGGGGCTCGAGTACTCCACGATCTCAGT 265564 Query 129756 GCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGC 129815 |||||| || || ||| || || ||||| | ||| ||||| |||| |||||| || Sbjct 265563 GCACAAGTTGCTGCATTTTATCGTTCCCAAGTTCTTCTGATTGGATTTCCGGTTGCATGC 265504 Query 129816 ATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTCGACAATGGTCCTGAA 129875 |||||||||| |||||| || || || || |||||||| | | ||| | | | Sbjct 265503 GTCTTTGTACAGCATGTAGGGGGTCCCAGTCTCGACTTGTGACATAAGAATTGCAGTCCA 265444 Query 129876 CAAGTCTCGAGCCTTGATCTGTCT-TACAAATTTGCCACATTTCTCGTATGCCACATACA 129934 | || |||||||| | ||| | | ||| ||| | || ||||||| || || | Sbjct 265443 GAGATCACGAGCCTTCACCTGACGCTTGAAACGAGCCTCGTT-CTCGTATTTTACGTAGA 265385 Query 129935 GTTGTTCAAATTCTGAGCCGTGTACGGTGTCGAGCAACGGCG-----ATTCACGCGGACA 129989 | | ||||| ||| || | ||| ||| ||| | || | || || Sbjct 265384 GATTCTCAAACTCTTCACCCCAA---GAGTCA--CAAAGGCCTGGACACTCGTGGGGGCA 265330 Query 129990 CATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTACCCACAG 130049 ||||| ||||||||| |||||||| |||||||||||| || | ||| || | ||| || Sbjct 265329 CATCAGACTCCACATACCATCCGCCAGGACTCGTTTCATGAATAGATCAGGAATCCAGAG 265270 Query 130050 GGCGTACAACAAATCTCGCGCTTTTCTATCCTCGGCACCCATGTTACGTTTCAGTTCAAG 130109 ||||| |||| || |||||| | ||||| || |||| || || || || Sbjct 265269 TGCGTAGAACAGCTCACGCGCTCTATATTCCTCCTTTCCTGTGTTCTTCTTGAGATCGAG 265210 Query 130110 GAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTTT 130169 | ||| | ||||| |||||||| || || | |||||| || | |||||| ||||| Sbjct 265209 AACATCAAAGATGTCAGCGTGCCAGGGCTCGAGATAAATGGCAAATGCGCCAGGACGTTT 265150 Query 130170 G---CCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACAT 130217 | || || || ||||||| || | | || ||||| || || | ||| Sbjct 265149 GTTTCCACCCTGATCAACGTAACGTGCTGTGTTATTGTAAACACGAAGCAT 265099 >seq37 Length=1171872 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | || || ||||| | || || || || || | | Sbjct 188892 ATGCAAATATTCGTAAAGACTCTGACTGGCAAAACCATTACACTGGAGGTTGAGGCATCT 188951 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | ||| || |||||||| || || ||||| ||||| |||||| Sbjct 188952 GACACCATCGAAAATGTTAAAGCTAAGATTCAAGATAAAGAAGGTATCCCACCAGATCAA 189011 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || |||||||| ||||| || |||||| | || | ||||||||||| Sbjct 189012 CAGCGTTTGATCTTTGCCGGTAAACAATTGGAGGATGGAAGAACTCTTTCCGATTACAAT 189071 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||||||||||||| | || | ||| | || | || ||||| Sbjct 189072 ATTCAAAAAGAATCCACCCTCCACCTCGTTCTCCGTCTTCGAGGAGG 189118 Score = 122 bits (134), Expect = 7e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || ||| | || || || || |||| |||||||| || || | Sbjct 189348 ATGCAGATTTTTGTCAAGACTCTGACTGGAAAGACCATCACACTTGAAGTAGAGGCCTCT 189407 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || |||| || || || || |||||||| || || || ||||| Sbjct 189408 GATACTATTGAAAATGTCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCTGATCAG 189467 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || || || ||||| | |||||| | | || |||| || |||||| Sbjct 189468 CAACGTTTGATCTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTCTCAGACTACAAC 189527 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 |||||||||||||| ||| | || || ||| Sbjct 189528 ATTCAAAAAGAATCGACCCTTCACTTGGTT 189557 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | || || ||||| |||| || || || || | | Sbjct 188664 ATGCAAATATTCGTAAAGACTCTGACTGGCAAAACCATCACCCTGGAGGTCGAGGCTTCT 188723 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || || ||||| ||||| ||||| || || || Sbjct 188724 GACACCATTGAAAATGTCAAGGCCAAGATCCAGGACAAAGAGGGAATTCCTCCAGACCAG 188783 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| || || || ||||| || |||||| | || | || |||||||| Sbjct 188784 CAACGTCTTATCTTCGCTGGTAAACAATTGGAGGATGGAAGAACTCTTTCAGATTACAAT 188843 Query 22399 ATTCAAAAAGAATCCAC 22415 |||||||| ||||| || Sbjct 188844 ATTCAAAAGGAATCTAC 188860 Score = 91.5 bits (100), Expect = 1e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || |||| || || || ||||| ||||| ||||| || || || Sbjct 188496 GATACCATTGAAAATGTCAAGGCCAAGATCCAGGACAAAGAGGGAATTCCTCCAGACCAG 188555 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| || || || || ||| | |||||| | | || | || ||||||||| Sbjct 188556 CAACGTCTTATCTTCGCTGGTAAGCAGCTTGAGGATGGCAGAACTCTTTCAGATTACAAC 188615 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 |||||||| ||||| || | || || ||| Sbjct 188616 ATTCAAAAGGAATCGACTCTTCACTTGGTT 188645 >seq425 Length=33725 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || ||||||||||| |||| || ||||| |||| || || || || | Sbjct 29924 AACATGCAGATCTTTGTTAAAACCCTAACGGGGAAAACCATCACCCTCGAGGTAGAGGCT 29865 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| || | || || ||||| ||||| || ||||||||||| ||||| || || Sbjct 29864 TCCGACACAATCGAAAATGTCAAAGCCAAAATCCAGGACAAGGAGGGAATTCCCCCAGAC 29805 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 ||||| | || || || || || || ||| | || ||| ||||| |||| |||||| Sbjct 29804 CAACAGAGGCTGATCTTCGCTGGTAAGCAGCTCGAAGATGGACGCACTCTCTCTGATTAC 29745 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| || ||||| || | || || || || |||| || || ||| Sbjct 29744 AACATTCAGAAGGAATCAACACTTCACTTGGTACTGAGATTACGTGGTGGT 29694 >seq7 Length=2059422 Score = 100 bits (110), Expect = 2e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||||| || || || || |||| ||||| || || | | Sbjct 739941 ATGCAGATTTTCGTCAAGACTTTGACGGGAAAGACTATCACCCTTGAGGTTGAGCCTTCT 739882 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || ||||| || ||||| || || ||||| ||||| || || ||| Sbjct 739881 GATACCATCGAAAATGTCAAAGCCAAGATTCAGGATAAAGAGGGAATTCCTCCAGACCAA 739822 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || || ||||| | |||||| || || |||| ||||||||| Sbjct 739821 CAGCGATTGATTTTCGCTGGGAAACAACTCGAGGATGGGCGTACTCTCTCTGATTACAAC 739762 Query 22399 ATTCAAAA 22406 || ||||| Sbjct 739761 ATCCAAAA 739754 >seq17 Length=1605837 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || ||||| |||| ||||| || || | | Sbjct 83178 ATGCAGATCTTCGTCAAGACTCTCACAGGGAAAACCATCACCCTTGAGGTCGAGGCTTCA 83119 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| ||||| || ||||||||||| ||||| || || || Sbjct 83118 GACACCATCGAAAACGTCAAGGCTAAAATCCAGGACAAGGAGGGGATTCCCCCAGACCAG 83059 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || || || || |||||| | ||||| ||||| |||| ||||||||| Sbjct 83058 CAGAGATTGATCTTCGCTGGAAAACAGCTGGAGGACGGACGCACACTCTCTGATTACAAC 82999 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || || || |||||||| | || ||||| Sbjct 82998 ATCCAGAAGGAATCCACTCTTCACTTAGT 82970 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || ||||| |||| ||||| || || | | Sbjct 83535 ATGCAGATCTTCGTCAAGACTCTCACAGGGAAAACCATCACCCTTGAGGTCGAGGCTTCA 83476 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| ||||| || ||||||||||| ||||| || || || Sbjct 83475 GACACCATCGAAAACGTCAAGGCTAAAATCCAGGACAAGGAGGGGATTCCCCCAGACCAG 83416 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || || || || |||||| | ||||| ||||| |||| ||||||||| Sbjct 83415 CAGAGATTGATCTTCGCTGGAAAACAGCTGGAGGACGGACGCACACTCTCTGATTACAAC 83356 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || || || |||||||| | || ||||| Sbjct 83355 ATCCAGAAGGAATCCACTCTTCACTTAGT 83327 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || ||||| |||| ||||| || || | | Sbjct 83763 ATGCAGATCTTCGTCAAGACCCTCACAGGGAAAACCATCACCCTTGAGGTCGAGGCGTCA 83704 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| ||||| || ||||| ||||| ||||| || || || Sbjct 83703 GACACCATCGAAAATGTCAAGGCTAAAATCCAGGACAAAGAGGGAATTCCCCCAGACCAG 83644 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || || || || |||||| | ||||| ||||| | || ||||||||| Sbjct 83643 CAGAGATTGATCTTCGCTGGAAAACAGCTGGAGGACGGACGCACTCTTTCTGATTACAAC 83584 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || || ||| | || || || | ||| | || ||||| Sbjct 83583 ATCCAGAAGGAGTCTACCCTCCACTTGGTCCTTCGACTTCGTGGAGG 83537 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || ||||| | || ||||| || || | | Sbjct 84219 ATGCAGATCTTCGTCAAGACCCTCACAGGGAAAACCATTACCCTTGAGGTCGAGGCGTCA 84160 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| ||||| || ||||||||||| ||||| || || || Sbjct 84159 GACACCATCGAAAATGTCAAGGCTAAAATCCAGGACAAGGAGGGAATTCCCCCAGACCAG 84100 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || || || || || || || || ||| ||||| |||| ||||||||| Sbjct 84099 CAGAGATTGATCTTCGCTGGAAAGCAATTGGAAGATGGTCGCACACTCTCTGATTACAAC 84040 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || || || | ||||| || | ||| | || ||||| Sbjct 84039 ATCCAGAAGGAGTCGACTCTTCATTTGGTCCTTCGACTTCGTGGAGG 83993 >seq113 Length=346302 Score = 87.8 bits (96), Expect = 2e-12 Identities = 348/541 (64%), Gaps = 19/541 (4%) Strand=Plus/Plus Query 129688 TTGACACAAATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACA 129747 ||||| |||||||||||||||||| || ||| ||| | | ||||||||| Sbjct 257190 TTGACTGCAATCGAGGCCAAATTGCAAACAGCAACTTCATCGGGGCTCGAGTACTCGACG 257249 Query 129748 ATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATG 129807 || || | ||||| || || ||| || || ||||| | ||| ||||| ||| | Sbjct 257250 ATCTCAGTACACAAGTTGCTGCATTTTATCGTTCCCAAGTTCTTCTGATTGGATTTTCTA 257309 Query 129808 TTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTCGACAAT- 129866 ||||| || || ||||||| |||||| || || || || |||||||| | | ||| Sbjct 257310 TTGCATGCGTCCTTGTACAGCATGTAGGGAGTTCCAGTCTCGACTTGTGACATAAGAATT 257369 Query 129867 --GGTCCTGAACAAGTCTCGAGCCTTGATCTGTC-TTACAAATTTGCCACATTTCTCGTA 129923 |||| || | || ||||| || | ||| | | ||| ||| | | |||||| Sbjct 257370 GCAGTCCAGAGC---TCACGAGCTTTCACCTGACGCTTGAAACGGGCCTC-TCCCTCGTA 257425 Query 129924 TGCCACATACAGTTGTTCAAATT-CTGAGCCGTGTACGGTGTC---GAGCAACGGCGATT 129979 || || | || |||| || | || |||||| || || ||| Sbjct 257426 CTGTGTGTAGAGCTTCTCGAATTCCTCACCC----CAGGTGTCACATAGGCCTGGACATT 257481 Query 129980 CACGCGGACACATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGG 130039 | | || ||||||| |||||||| | ||||| || |||||||| || ||||| | Sbjct 257482 CGTGGGGGCACATCAGACTCCACACATCGTCCGCCAGAACACGTTTCATGAATAAATCCG 257541 Query 130040 GTACCCACAGGGCGTACAACAAATCTCGCGCTTTTCTATCCTCGGCACCCATGTTACGTT 130099 | | ||| || ||||| || | || || ||| ||||| || |||| | Sbjct 257542 GGATCCAGAGTGCGTAAAAAAGTTCACGTGCTCGATATTCCTCTTTTCCTGTGTTTTTCT 257601 Query 130100 TCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGC 130159 | || || || | |||| | ||||| |||||||| || || | |||||| || | ||| | Sbjct 257602 TGAGATCGAGAACATCGAATATGTCAGCGTGCCAGGGCTCGAGATAAATGGCAAATGCTC 257661 Query 130160 CCTTCCGTTTG---CCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACA 130216 | |||||| || || || ||||| | || | | || ||||| || || | || Sbjct 257662 CAGGACGTTTGTTTCCACCCTGATCAACATAACGTGCTGTGTTATTGTAAACACGAAGCA 257721 Query 130217 T 130217 | Sbjct 257722 T 257722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419722669716730