Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq113 100 3e-16 >seq113 Length=346302 Score = 100 bits (110), Expect = 3e-16 Identities = 235/351 (67%), Gaps = 3/351 (1%) Strand=Plus/Minus Query 95070 TATC-AAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGG 95128 |||| ||||||||| | | ||| | || || |||| || ||||| || ||||| || | Sbjct 256779 TATCTAAACACGGTATTAGGAACTCTCTCCTACTGGCACCAATGCCAACAGCCTCAACAG 256720 Query 95129 CGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGC 95188 | || || || || ||||||||| | | || || | |||| |||| | ||| |||| Sbjct 256719 CCCAAATTCTGGGTAACAACGAGGCCATTGAGCCTTACACCAGCAACATCTACGCGAGGC 256660 Query 95189 GGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTC 95248 | || || | || ||||||| || |||| || || || |||||| || | Sbjct 256659 GTGTACTGTCTGGTGAATTCCAAGTAGTCAATCCCCATCTGCTGAAGGACCTCACCGAGC 256600 Query 95249 TGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGC-CAACGGCTCCGTCCAG 95307 | | | |||| ||| | | |||||||| | || ||| ||| ||||| ||||| Sbjct 256599 GTGATCTCTGGGACGACGACATGAAGAACCAGATAATA-GCGAGCAATGGCTCGATCCAG 256541 Query 95308 AACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCG 95367 |||||| | || || | ||| ||||||| || |||| || || ||||| || || Sbjct 256540 AACATCGACAACATCCCAGCAGACCTCAAGGCACTGTACAGAACAGTCTGGGAAATTCCC 256481 Query 95368 CAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAG 95418 ||| | |||| ||| | || || | || ||| |||||||| |||| Sbjct 256480 CAGAGGATGATCCTCAAGATGGCTGCTGATCGTGGGGCCTTCATCGACCAG 256430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494716756230320