Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq109 228 8e-55 seq113 161 1e-34 seq37 118 1e-21 seq425 98.7 1e-15 seq7 89.7 5e-13 >seq109 Length=386716 Score = 228 bits (252), Expect = 8e-55 Identities = 730/1119 (65%), Gaps = 29/1119 (3%) Strand=Plus/Minus Query 153030 TTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAGGT 153089 |||||||| || || || || | ||| || |||||| | || | |||||| ||| | || Sbjct 266192 TTGACCACCTGGAATTCACCAGACAATACACGTCTCGAGTAGATATTGCTGGTGTAGGGC 266133 Query 153090 TCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACC 153149 || | || ||||| || || || ||||| || || | || || ||||| |||| Sbjct 266132 TCGATGGCCTCGTTGTTCCCAAGAATTTGGGCTGTTGAGGCTGTTGGCATTGGTGCCAGT 266073 Query 153150 AACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCCAC 153209 | | ||| |||| | ||||| ||| | ||||| | ||| ||||| Sbjct 266072 AGGAGAGAGTTCCTGATACCGTGTTTGGAAATTTTATCCTTGAGTTTAGCCCAGTCCCAG 266013 Query 153210 AGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGACTG 153269 || | ||||| | ||||||||||||||| | | || | ||| | || | Sbjct 266012 AGATTTGTTGGTGTTACACCCCACATGTCGTACTGGAGGATGCCCTGGCTGACTGGTGAG 265953 Query 153270 CCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGCGCG 153329 || |||| |||| |||| | ||||| || ||||| |||||||| || Sbjct 265952 CCTTTGTACGTCTCGTAGGTGCCCTTCTCCTGGGCGAGCTCGCATGAGGCCTCGAGTGCA 265893 Query 153330 CCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTCGTAC 153389 || || || | ||| ||| ||| || ||||||| || || ||||| ||| | Sbjct 265892 CCGTAATACAGGGTCTCGAAGATCTGGATATTGAGTTTCTGGGCGTCATCGCTGTCGAAT 265833 Query 153390 GGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGA 153449 || |||| ||| | ||| || || ||||||||||| | || | || ||||| || Sbjct 265832 GGATAACGCATCAGTAGAAATGCATCTGCCAGACCCTGAACTCCAATTCCCATGGGACGG 265773 Query 153450 TGCTTCTCGTTGCTGCGCCTCGCGCTCGCT--ATGGGATAGTGATTGCGATCGATAATTT 153507 || || ||||| | | || || ||| | || || |||||| ||||| | | Sbjct 265772 TGTCTCACGTTG--GAGACTTTTGCCTGCTCAAGTGGGTAATGATTGACGTCGATCACTC 265715 Query 153508 TGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGTCA 153567 ||| |||||| | || ||||| | | ||| || |||| || || || || Sbjct 265714 TGTCGAGGTTTCTGGTAACAACTTTGACGACTGTCTTCAGCTTCTTAAAGTCGTAAGTTT 265655 Query 153568 TTTCGTC--GACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGACGGCCGT 153625 ||| | || | ||| | || || ||||| || |||| ||| || || || | Sbjct 265654 TTTTCACTGGATCC--ACGAACATGTTAACTGCAATCGAGGCCAAATTGCAAACAGCAAT 265597 Query 153626 CTCTTCGGCG-TCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGC 153684 || |||| | ||| ||||| ||||||||| | ||| | ||||||||||||||| | Sbjct 265596 TTCATCGGGGCTCGA-GTACTCCACGATCTCAGTGCACAAGTTGCTGCATTTTATCGTTC 265538 Query 153685 CCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGC 153744 |||| || | ||||||| ||| || ||||| ||||||||| | |||||||| || | Sbjct 265537 CCAAGTTCTTCTGATTGGATTTCCGGTTGCATGCGTCTTTGTACAGCATGTAGGGGGTCC 265478 Query 153745 CGGTCTCGACTTGCGTTTCGACGATAAACCTATGCAGGTCCTGCGCTCGC-ACCCG---- 153799 | ||||||||||| | || |||| | ||||| ||| | | || | | || Sbjct 265477 CAGTCTCGACTTGTG-----AC-ATAAGAAT-TGCAG-TCCAGAGATCACGAGCCTTCAC 265426 Query 153800 CTGCCGATAG---CGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCC 153856 ||| || | | || ||||| |||||||| |||| || ||||||||| || || Sbjct 265425 CTGACGCTTGAAACGAGCCTCGTTCTCGTATTTTACGTAGAGATTCTCAAACTCTTCACC 265366 Query 153857 GTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGC 153916 | |||| ||||| ||||||| || || |||||||| ||||||| | || || Sbjct 265365 CCAAGAGTCACAAAGGCCTGGACACTCGTGGGGGCACATCAGACTCCACATACCATCCGC 265306 Query 153917 GTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTT 153976 ||| ||| |||||| ||||| || | |||||| ||||| | || || ||||| | Sbjct 265305 CAGGACTCGTTTCATGAATAGATCAGGAATCCAGAGTGCGTAGAACAGCTCACGCGCTCT 265246 Query 153977 GCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCACGCTATAGATGTCGGCGTGCCA 154036 | |||||| || |||| || |||| ||| || | ||||||| |||||||| Sbjct 265245 ATATTCCTCCTTTCCTGTGTTCTTCTTGAGATCGAGAACATCAAAGATGTCAGCGTGCCA 265186 Query 154037 GGGTTCAATGTAGACGGCCAGGGCACCTTTACG---CTTTCCGCCCTGATCGACGTGGCG 154093 ||| || | || | ||| | || || ||| ||||| |||||||| |||| || Sbjct 265185 GGGCTCGAGATAAATGGCAAATGCGCCAGGACGTTTGTTTCCACCCTGATCAACGTAACG 265126 Query 154094 CACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCC 154132 | | || ||| | || || | ||||||| | || || Sbjct 265125 TGCTGTGTTATTGTAAACACGAAGCATGGGTACAAGCCC 265087 >seq113 Length=346302 Score = 161 bits (178), Expect = 1e-34 Identities = 713/1118 (64%), Gaps = 27/1118 (2%) Strand=Plus/Plus Query 153030 TTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAGGT 153089 ||||| ||||| || || || | || || || ||| || | ||||| ||| |||| Sbjct 256629 TTGACTACTTGGAATTCACCAGACAGTACACGCCTCGCGTAGATGTTGCTGGTGTAAGGC 256688 Query 153090 TCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACC 153149 |||| || ||||| || || || ||||| || || | || || ||||| |||| Sbjct 256689 TCAATGGCCTCGTTGTTACCCAGAATTTGGGCTGTTGAGGCTGTTGGCATTGGTGCCAGT 256748 Query 153150 AACAAAGAATTCCGCAAGCCGTGCGCTCGA-ATGTCGTCCTTCAACGCCTGCCAATCCCA 153208 | | ||| |||| | ||||| | || || | ||||| | | ||| ||||| Sbjct 256749 AGGAGAGAGTTCCTAATACCGTGTT-TAGATATTTTATCCTTGAGTTCAGCCCAGTCCCA 256807 Query 153209 CAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGACT 153268 || | ||||| | ||||||||| ||||| | | || | ||| | || Sbjct 256808 GAGATTTGTTGGTGTTACACCCCACATGTCATACTGGAGGATGCCCTGGCTGACTGGTGA 256867 Query 153269 GCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGCGC 153328 ||| |||| |||| |||| | ||||| || ||||| |||||||| || Sbjct 256868 GCCTTTGTACGTCTCGTAGGTGCCCTTCTCCTGGGCGAGCTCGCATGAGGCCTCGAGGGC 256927 Query 153329 GCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTCGTA 153388 ||||| || | ||| ||| ||| || ||||||| || || | ||| ||| | Sbjct 256928 ACCATAATACAGGGTCTCGAAGATCTGGATATTGAGTTTCTGGGCCTCATTGCTGTCGAA 256987 Query 153389 CGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGTCG 153448 || |||| ||| | ||| || || ||||||||||| | || | || ||||| || Sbjct 256988 TGGATAACGCATCAGTAGAAATGCATCTGCCAGACCCTGAACTCCAATTCCCATGGGACG 257047 Query 153449 ATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAATTTT 153508 ||| || |||| | || || | | || || || | |||| |||||||| | | Sbjct 257048 ATGTCTCATGTTGGAGACTCTTGCCTCCTCGATTGGGTAATAATTGACATCGATAACTCT 257107 Query 153509 GTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGTCAT 153568 || ||| || | | || | ||| | | ||| || || | || | || ||| | Sbjct 257108 GTCGAGATTTCTTGCGACGATTTTGACGACTGTCTTCAGCTTGTTAAAGTTGTAAGTCTT 257167 Query 153569 TTCGTCGACGCGT--ACGCATCGATTCACGGCAATAGACGCCAGATTACAGACGGCCGTC 153626 || || | || ||| | || || ||||| || |||| ||| || || || Sbjct 257168 TT--TCACTGGGTCCACGAACATGTTGACTGCAATCGAGGCCAAATTGCAAACAGCAACT 257225 Query 153627 TCTTCGGCG-TCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCC 153685 || |||| | ||| ||||| |||||||| | || | ||||||||||||||| || Sbjct 257226 TCATCGGGGCTCGA-GTACTCGACGATCTCAGTACACAAGTTGCTGCATTTTATCGTTCC 257284 Query 153686 CAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCC 153745 ||| || | ||||||| ||| | |||||| ||||| ||| | |||||||| || || Sbjct 257285 CAAGTTCTTCTGATTGGATTTTCTATTGCATGCGTCCTTGTACAGCATGTAGGGAGTTCC 257344 Query 153746 GGTCTCGACTTGCGTTTCGACGATAAACCTATGCAGGTCCTGCGCTC--------GCACC 153797 ||||||||||| ||| |||| | |||| |||| | |||| |||| Sbjct 257345 AGTCTCGACTTG-----TGAC-ATAAGAAT-TGCA-GTCCAGAGCTCACGAGCTTTCACC 257396 Query 153798 CGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCG 153857 | || | ||| |||| | |||||| | ||| || ||| || || || || Sbjct 257397 TGACGCTTGAAACGGGCCTCTCCCTCGTACTGTGTGTAGAGCTTCTCGAATTCCTCACCC 257456 Query 153858 TAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCG 153917 || ||| ||||| ||||| | || || |||||||| ||||| |||||| || Sbjct 257457 CAGGTGTCACATAGGCCTGGACATTCGTGGGGGCACATCAGACTCCACACATCGTCCGCC 257516 Query 153918 TTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTG 153977 || ||| |||||| | |||||| | |||||| ||||| | || || || || Sbjct 257517 AGAACACGTTTCATGAATAAATCCGGGATCCAGAGTGCGTAAAAAAGTTCACGTGCTCGA 257576 Query 153978 CAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCACGCTATAGATGTCGGCGTGCCAG 154037 | ||||| || |||| || |||| ||| || | ||||| ||||||||| Sbjct 257577 TATTCCTCTTTTCCTGTGTTTTTCTTGAGATCGAGAACATCGAATATGTCAGCGTGCCAG 257636 Query 154038 GGTTCAATGTAGACGGCCAGGGCACCTTTACG---CTTTCCGCCCTGATCGACGTGGCGC 154094 || || | || | ||| | || || ||| ||||| |||||||| || | || Sbjct 257637 GGCTCGAGATAAATGGCAAATGCTCCAGGACGTTTGTTTCCACCCTGATCAACATAACGT 257696 Query 154095 ACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCC 154132 | | || ||| | || || | ||||||| | || || Sbjct 257697 GCTGTGTTATTGTAAACACGAAGCATGGGTACAAGCCC 257734 >seq37 Length=1171872 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| ||||| | ||| | ||| | || | | | || || |||||||| ||||| ||| Sbjct 189119 GCCTCCTCGAAGACGGAGAACGAGGTGGAGGGTGGATTCTTTTTGAATATTGTAATCGGA 189060 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | ||||| | ||||||||||| | |||| | ||||||||| || || || Sbjct 189059 AAGAGTTCTTCCATCCTCCAATTGTTTACCGGCAAAGATCAAACGCTGTTGATCTGGTGG 189000 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCA 138565 ||||||||||| || ||| | || | ||||| | ||| | |||||| | | ||| | Sbjct 188999 GATACCTTCTTTATCT-TGAATCTTAGCTTTAACATTTTCGATGGTGTCAGATGCCTCAA 188941 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | ||||| ||||||||||| ||||| || || ||||| Sbjct 188940 CCTCCAGTGTAATGGTTTTGCCAGTCAGAGTCTTTACGAATATTTGCAT 188892 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||||||||| ||||| || | ||| | ||||| | ||||||||| | Sbjct 188857 GATTCCTTTTGAATATTGTAATCTGAAAGAGTTCTTCCATCCTCCAATTGTTTACCAGCG 188798 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| ||||| || ||||| ||||| || || |||||||| ||| || || | Sbjct 188797 AAGATAAGACGTTGCTGGTCTGGAGGAATTCCCTCTTTGTCCTGGATCTTGGCCTTGACA 188738 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | ||| | |||||| | | ||| ||||| | || | ||||| ||||||||||| ||| Sbjct 188737 TTTTCAATGGTGTCAGAAGCCTCGACCTCCAGGGTGATGGTTTTGCCAGTCAGAGTCTTT 188678 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 188677 ACGAATATTTGCAT 188664 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| | ||| | ||| || || | | | || || ||||||||||||||||| Sbjct 189574 CCACCTCTGAGACGAAGAACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGAG 189515 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | ||||| ||||||||||| | |||| | ||| || || || ||||| Sbjct 189514 AGAGTTCTGCCA-TCCTCCAGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGAGG 189456 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || || || ||| || || | | ||| | || || | | ||| || Sbjct 189455 GATGCCCTCCTTATCCTGGATCTTGGCCTTGACATTTTCAATAGTATCAGAGGCCTCTAC 189396 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||||||||| || |||||||||||||| Sbjct 189395 TTCAAGTGTGATGGTCTTTCCAGTCAGAGTCTTGACAAAAATCTGCAT 189348 >seq425 Length=33725 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||| ||||| ||||||||||| || | ||| || || ||||| || ||||| | Sbjct 29726 TTGATTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGTCCATCTTCGAGCTGCTTACCAG 29785 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 |||| || | ||||||||| || || || || || ||||| |||||| ||| | Sbjct 29786 CGAAGATCAGCCTCTGTTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATTTTGGCTTTGA 29845 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | ||| | ||||||| | ||| ||||||| || | ||||| || || || |||| Sbjct 29846 CATTTTCGATTGTGTCGGAAGCCTCTACCTCGAGGGTGATGGTTTTCCCCGTTAGGGTTT 29905 Query 138599 TTACAAAAATCTGCATG 138615 | ||||| ||||||||| Sbjct 29906 TAACAAAGATCTGCATG 29922 >seq7 Length=2059422 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 ||||||| |||||||| || | ||||||| |||||||||||||| || | | | Sbjct 739752 CCTTTTGGATGTTGTAATCAGAGAGAGTACGCCCATCCTCGAGTTGTTTCCCAGCGAAAA 739811 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGT 138543 | | ||||||||||| ||||| || || ||||| || ||| | || | ||| | | | Sbjct 739812 TCAATCGCTGTTGGTCTGGAGGAATTCCCTCTTTATC-CTGAATCTTGGCTTTGACATTT 739870 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | ||| || | | ||| ||||| | || | || || || |||| ||| || || Sbjct 739871 TCGATGGTATCAGAAGGCTCAACCTCAAGGGTGATAGTCTTTCCCGTCAAAGTCTTGACG 739930 Query 138604 AAAATCTGCAT 138614 ||||||||||| Sbjct 739931 AAAATCTGCAT 739941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496255936182240