Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq17 131 2e-25 seq425 129 6e-25 seq37 118 1e-21 seq7 91.5 1e-13 >seq17 Length=1605837 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || || | ||| | |||||||| | |||||||| || || ||||| ||||| Sbjct 84221 CCTCCACGAAGTCGAAGGACCAAATGAAGGGTAGACTCCTTCTGGATATTATAATCAGAA 84280 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||||||||||||| ||||||||| |||||| || || || Sbjct 84281 AGAGTGCGTCCGTCCTCCAGCTGTTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGA 84340 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| |||||| ||||| | || | || |||| | ||| || Sbjct 84341 ATTCCCTCCTTGTCCTGGATTTTAGCCTTGACGTTCTCAATAGTATCCGAAGCCTCAACC 84400 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || ||||| ||||| ||||| || || |||||||| Sbjct 84401 TCTAGGGTGATGGTCTTGCCCGTCAGTGTTTTCACGAATATCTGCAT 84447 Score = 129 bits (142), Expect = 6e-25 Identities = 149/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || || |||||||| | ||||| || || |||||||||||| Sbjct 82982 GTGGATTCCTTCTGGATGTTGTAATCAGAGAGTGTGCGTCCGTCCTCCAGCTGTTTTCCA 83041 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||||| |||||| || || || || |||||||||||| |||||| |||| Sbjct 83042 GCGAAGATCAATCTCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTGGATTTTAGCCTTG 83101 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | ||||| |||||| | | |||||| || | ||| | ||||| || || ||||| Sbjct 83102 ACGTTTTCGATGGTGTCTGAAGCCTCGACCTCAAGGGTGATGGTTTTCCCTGTGAGAGTC 83161 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || || || ||||||||| || Sbjct 83162 TTGACGAAGATCTGCATGCCT 83182 Score = 129 bits (142), Expect = 6e-25 Identities = 149/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || || |||||||| | ||||| || || |||||||||||| Sbjct 83339 GTGGATTCCTTCTGGATGTTGTAATCAGAGAGTGTGCGTCCGTCCTCCAGCTGTTTTCCA 83398 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||||| |||||| || || || || |||||||||||| |||||| |||| Sbjct 83399 GCGAAGATCAATCTCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTGGATTTTAGCCTTG 83458 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | ||||| |||||| | | |||||| || | ||| | ||||| || || ||||| Sbjct 83459 ACGTTTTCGATGGTGTCTGAAGCCTCGACCTCAAGGGTGATGGTTTTCCCTGTGAGAGTC 83518 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || || || ||||||||| || Sbjct 83519 TTGACGAAGATCTGCATGCCT 83539 Score = 129 bits (142), Expect = 6e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || || | ||| | ||||| || | |||||||| || || || |||||||| Sbjct 83537 CCTCCACGAAGTCGAAGGACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCAGAA 83596 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||||||||||||| ||||||||| |||||| || || || Sbjct 83597 AGAGTGCGTCCGTCCTCCAGCTGTTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGA 83656 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||| |||||| |||||| ||||| | ||||| |||||| | |||||| Sbjct 83657 ATTCCCTCTTTGTCCTGGATTTTAGCCTTGACATTTTCGATGGTGTCTGACGCCTCGACC 83716 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || | ||| | ||||| || || || || || || || ||||||||| || Sbjct 83717 TCAAGGGTGATGGTTTTCCCTGTGAGGGTCTTGACGAAGATCTGCATGCCT 83767 Score = 129 bits (142), Expect = 6e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || || | ||| | |||||||| | |||||||| || || ||||||||||| Sbjct 83765 CCTCCACGAAGTCGAAGGACCAAATGAAGGGTAGACTCCTTCTGGATATTGTAATCAGAA 83824 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||||||||||||| | ||||||| |||||| || || || Sbjct 83825 AGAGTGCGTCCGTCCTCCAGCTGTTTTCCAGCGAAAATCAATCTCTGCTGGTCTGGGGGA 83884 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| |||||| ||||| | || | ||||| | |||||| Sbjct 83885 ATTCCCTCCTTGTCCTGGATTTTAGCCTTGACGTTCTCAATAGTGTCTGACGCCTCGACC 83944 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || | ||| | ||||| || || ||||| || || || ||||||||| || Sbjct 83945 TCAAGGGTAATGGTTTTCCCTGTGAGAGTCTTGACGAAGATCTGCATGCCT 83995 Score = 129 bits (142), Expect = 6e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || || | ||| | |||||||| | || ||||| || || || |||||||| Sbjct 83993 CCTCCACGAAGTCGAAGGACCAAATGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGAG 84052 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || | || ||||||||| ||||||||| |||||| || || || Sbjct 84053 AGTGTGCGACCATCTTCCAATTGCTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGA 84112 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| |||||| ||||| | ||||| |||||| | |||||| Sbjct 84113 ATTCCCTCCTTGTCCTGGATTTTAGCCTTGACATTTTCGATGGTGTCTGACGCCTCGACC 84172 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || | ||| | ||||| || || || || || || || ||||||||| || Sbjct 84173 TCAAGGGTAATGGTTTTCCCTGTGAGGGTCTTGACGAAGATCTGCATGCCT 84223 >seq425 Length=33725 Score = 129 bits (142), Expect = 6e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| ||||||| || ||||| || | || || || || ||||| |||||||| Sbjct 29692 GCACCACCACGTAATCTCAGTACCAAGTGAAGTGTTGATTCCTTCTGAATGTTGTAATCA 29751 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | ||||| ||| || ||||| || |||||| |||||| | ||| || || || Sbjct 29752 GAGAGAGTGCGTCCATCTTCGAGCTGCTTACCAGCGAAGATCAGCCTCTGTTGGTCTGGG 29811 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || |||||||||||| |||||| |||| | ||||| ||||| | | ||| Sbjct 29812 GGAATTCCCTCCTTGTCCTGGATTTTGGCTTTGACATTTTCGATTGTGTCGGAAGCCTCT 29871 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || |||| ||| | ||||| || || || ||||| ||||| ||||||||| Sbjct 29872 ACCTCGAGGGTGATGGTTTTCCCCGTTAGGGTTTTAACAAAGATCTGCATG 29922 >seq37 Length=1171872 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | || | ||||| || | ||||| || ||||||||||||||||| Sbjct 188891 TCCACCACGAAGACGTAGGACCAAGTGAAGAGTAGATTCCTTTTGAATATTGTAATCTGA 188832 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || | ||| || | ||||| |||||| |||| | || ||||| || ||||| Sbjct 188831 AAGAGTTCTTCCATCCTCCAATTGTTTACCAGCGAAGATAAGACGTTGCTGGTCTGGAGG 188772 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||| |||||| ||| || ||||| | ||| | |||||| | | |||||| Sbjct 188771 AATTCCCTCTTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCAGAAGCCTCGAC 188712 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | |||||||| |||||||| ||||| || || ||||| Sbjct 188711 CTCCAGGGTGATGGTTTTGCCAGTCAGAGTCTTTACGAATATTTGCAT 188664 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || || ||||||||||| ||||| || | || | ||| || Sbjct 189556 ACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGAGAGAGTTCTGCCATCCTCC 189497 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || ||||| |||||| ||||||| || |||||||| ||||| ||||||||||| ||| | Sbjct 189496 AGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGAGGGATGCCCTCCTTATCCTGG 189437 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||||| | ||| | || || | ||| ||||| | || | || || Sbjct 189436 ATCTTGGCCTTGACATTTTCAATAGTATCAGAGGCCTCTACTTCAAGTGTGATGGTCTTT 189377 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||||||| || |||||||||||||| Sbjct 189376 CCAGTCAGAGTCTTGACAAAAATCTGCAT 189348 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || ||||||||||||||||||||| | || | ||| || | ||||| || Sbjct 189088 GTGGATTCTTTTTGAATATTGTAATCGGAAAGAGTTCTTCCATCCTCCAATTGTTTACCG 189029 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 || ||||||| ||||| ||||| || || || || || || | | ||| | | || || Sbjct 189028 GCAAAGATCAAACGCTGTTGATCTGGTGGGATACCTTCTTTAT-CTTGAATCTTAGCTTT 188970 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | ||||| |||||| | ||| || || | || | |||||||| |||||||| Sbjct 188969 AACATTTTCGATGGTGTCAGATGCCTCAACCTCCAGTGTAATGGTTTTGCCAGTCAGAGT 188910 Query 127096 TTTTACAAAAATCTGCAT 127113 ||||| || || ||||| Sbjct 188909 CTTTACGAATATTTGCAT 188892 >seq7 Length=2059422 Score = 91.5 bits (100), Expect = 1e-13 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 ||||| || |||||||| | || || ||| || || ||||| |||||| | ||| Sbjct 739754 TTTTGGATGTTGTAATCAGAGAGAGTACGCCCATCCTCGAGTTGTTTCCCAGCGAAAATC 739813 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTC 127044 |||||||| || || ||||| || ||||| || ||| ||| | | || |||| | ||| Sbjct 739814 AATCGCTGTTGGTCTGGAGGAATTCCCTCTTTATCC-TGAATCTTGGCTTTGACATTTTC 739872 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || ||| || | | ||| || || | ||| | || || || |||| ||| || || || Sbjct 739873 GATGGTATCAGAAGGCTCAACCTCAAGGGTGATAGTCTTTCCCGTCAAAGTCTTGACGAA 739932 Query 127105 AATCTGCAT 127113 ||||||||| Sbjct 739933 AATCTGCAT 739941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475494606602080