Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq113 214 2e-50 seq109 214 2e-50 >seq113 Length=346302 Score = 214 bits (236), Expect = 2e-50 Identities = 1152/1820 (63%), Gaps = 51/1820 (3%) Strand=Plus/Plus Query 115552 TTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATT 115611 |||| || |||||||||||| || ||||| || || || ||| | | | |||||| Sbjct 256317 TTTGTTCTGAGGTAGTACATTCCAGTCTTCAGGCCAGACTCCCATCCGAAGAAATGCATG 256376 Query 115612 GAGGACAACTTGGAGAGTGTTGGACTTTCCAT--GAAGAGGTTCATACTTTGGGATTGAT 115669 || | | ||| | | |||||| || |||| ||| | || | ||||| || | Sbjct 256377 GATGTGAGCTTCTCGGGAGTTGGATTTGCCATATGAACA--TTGGTGGACTGGGACTGGT 256434 Query 115670 CGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA-CATCCTTCATCTTG---ATTTCC 115725 |||||||| || ||||| || ||||| | | | |||||| || | |||||| Sbjct 256435 CGATGAAGGCCCCACGATCAGCAGCCATCTTGAGGATCATCCT----CTGGGGAATTTCC 256490 Query 115726 CACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAG 115785 || || |||||||| || ||| | || ||||||| | |||| || ||||| ||| Sbjct 256491 CAGACTGTTCTGTACAGTGCCTTGAGGTCTGCTGGGATGTTGTCGATGTTCTGGATCGAG 256550 Query 115786 CCACCTGC-CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAG 115844 ||| ||| | | || | | |||||| || | ||||||| || || |||| Sbjct 256551 CCAT-TGCTCGCTATTATCTGGTTCTTCATGTCGTCGTCCCAGAGATCACGCTCGGTGAG 256609 Query 115845 ATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATA 115904 |||| || || || |||||| || || ||||| | || || ||| || Sbjct 256610 GTCCTTCAGCAGATGGGGATTGACTACTTGGAATTCACCAGACAGTACACGCCTCGCGTA 256669 Query 115905 GATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGC 115964 ||||||| | ||||| ||||||| | ||| |||||||||| ||||||||||| ||||| Sbjct 256670 GATGTTGCTGGTGTAAGGCTCAATGGCCTCGTTGTTACCCAGAATTTGGGCTGTTGAGGC 256729 Query 115965 TGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTT 116024 ||| ||||| ||||||| || || ||| | | ||| || ||||| Sbjct 256730 TGTTGGCATTGGTGCCAGTAGGAGAGAGTTCCTAATACCGTGTTTAGATATTTTATCCTT 256789 Query 116025 GAGGGCGTCCCAGTCGTAG----TTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGA 116080 ||| | ||||||| || ||| || || | | | ||||||| ||| |||||| Sbjct 256790 GAGTTCAGCCCAGTCCCAGAGATTTG---TTGGTGTTACAC-CCCACATGTCATACTGGA 256845 Query 116081 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 116140 |||| || ||| |||| || || | | ||||| || | ||||| ||| || | Sbjct 256846 GGATGCCCTGGCTGACTGGTGAGCCTTTGTACGTCTCGTAGGTGCCCTTCTCCTGGGCGA 256905 Query 116141 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTG 116200 ||| | ||||||||||| | | ||||| ||||| || || | ||| | | Sbjct 256906 GCTCGCATGAGGCCTCGAGGGCACCATAATACAGGGTCTCGAAGATCTGGATATTGAGTT 256965 Query 116201 CCTTGGCCTCGTCGGAATCAAACGCGAGACGGCA-CAAAATAAATACATCCGCGAGACCT 116259 || |||||| | | || || | || | ||| || | |||| |||| || ||||| Sbjct 256966 TCTGGGCCTCATTGCTGTCGAATG-GATAACGCATCAGTAGAAATGCATCTGCCAGACCC 257024 Query 116260 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGA 116319 || || || | || || || ||||||||||| || || || || ||| | || Sbjct 257025 TGAACTCCAATTCCCATGGGACGATGTCTCATGTTGGAGACTCTTGCCTCCTCGATTGGG 257084 Query 116320 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 116379 ||| |||| ||||||||| || | |||||| | | ||| | || || | | Sbjct 257085 TAATAATTGACATCGATAACTCTGTCGAGATTTCTTGCGACGATTTTGACGACTGTCTTC 257144 Query 116380 AGCTTTTCGTAATCAAAACTGCGAGTC-TCTTCATTG-----ACATACTTAGGAAGGGCG 116433 ||||| | ||| || |||| | |||| || || || | | || Sbjct 257145 AGCTT------GTTAAAGTTGTAAGTCTTTTTCACTGGGTCCACGAACATGTTGACTGCA 257198 Query 116434 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 116493 || || |||| ||| || |||| ||||| | |||||| | || || ||| Sbjct 257199 ATCGAGGCCAAATTGCAAACAGCAACTTCATCGGGGCTCGAGTACTCGACGATCTCAGTA 257258 Query 116494 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 116553 ||||| || | || || || ||||||||||| ||||| || ||| | || || || Sbjct 257259 CACAAGTTGCTGCATTTTATCGTTCCCAAGTTCTTCTGATTGGATTTTCTATTGCATGCG 257318 Query 116554 TCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAT 116613 |||||||| ||||| || || || || ||||| ||| ||| | ||||| || |||| Sbjct 257319 TCCTTGTACAGCATGTAGGGAGTTCCAGTCTCGACTTGTGACATAAGAATTGCAGTCCAG 257378 Query 116614 ACATCGGCGGCTGGCACAGTGGCG-TTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAG 116672 | || ||| ||| || || ||| || |||| ||||||||| ||||||||| Sbjct 257379 AGCTCACGAGCTTTCAC-CTGACGCTTGAAACGGGCCTCTCCCTCGTACTGTGTGTAGAG 257437 Query 116673 GGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAG 116732 ||| || || |||||| | || | || ||||| | | || || | || Sbjct 257438 CTTCTCGAATTCCTCACCCCAGGTGTCACATAGGCCTGGACATTCGTGGGGGCACATCAG 257497 Query 116733 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 116792 | ||| | | || || ||| || |||||||| | || ||||||||||| || | Sbjct 257498 ACTCCACACATCGTCCGCCAGAACACGTTTCATGAATAAATCCGGGATCCAGAGTGCGTA 257557 Query 116793 GAAGAGATCCCGACAGCGAGCTTCTTC-ATCCCCCTGATTGAGACGCAACTCCAAAAAGT 116851 || || || || ||| ||| || | || || || | | || | || | Sbjct 257558 AAAAAGTTCACGTGCTCGATATTCCTCTTTTCCTGTGTTTTTCTTG-AGATCGAGAACAT 257616 Query 116852 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG----- 116906 | | || || |||||||| || || || || | || | || || |||| Sbjct 257617 CGAATATGTCAGCGTGCCAGGGCTCGAGATAAATGGCAAATGCTCC---AGGACGTTTGT 257673 Query 116907 -ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATAC 116965 ||| |||| | ||||| | || || || | || |||||||| || | | | Sbjct 257674 TTCCACCCTGATCAACATAACGTGCTGTGTTATTGTAAACACGAAGCATGGGTACAAGCC 257733 Query 116966 CATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGT 117025 ||| ||| ||||| || || ||| || | | |||||||||| | ||| | | Sbjct 257734 CATTGGATATACCATTGGTACCAGCAATTCGTGTCCCCTTGGCTCTGATACAGTGTACAT 257793 Query 117026 GCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGA 117085 || ||||| || || || | || ||| |||| ||| | |||| || |||||| Sbjct 257794 TCACTCCAATTCCACCAGCTGATTTGCTGATGAGTGCACACCTCTTGAGGGTGTCGTAGA 257853 Query 117086 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTG 117145 | |||| || ||| | | ||| | ||| || ||||| ||||| ||| | || Sbjct 257854 TGCCATTAATGCTGTCGTCAGTCATTGTCAGGAGAAAACAGCTGGACATCTGTTGTCTAC 257913 Query 117146 GTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTA 117204 || | || ||| |||||||||| ||||| |||| || || | ||||| | Sbjct 257914 CAGTGCAGGCTGAGAAAAGGGTTGGTGATGCGTGAGTGAA-GTATCTCTCGGACAGATAG 257972 Query 117205 TCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATA 117264 | ||| ||||| | ||| | ||||| || |||| || || | | || | ||| Sbjct 257973 TTGTATGTCTCAATGACCCTGTCGATGTCCTCTTCGTGTATTCCCACAGCCACTCTCATC 258032 Query 117265 AACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCC 117324 | ||||| || | || | |||||| || | || | || ||||| |||| Sbjct 258033 AGCATGTGGGCAGGCCTCTCAGCTACTTTACCATTGATCTTCAGCAGATAACTTCTCTCG 258092 Query 117325 AAGGTCTTGAGACCAAAATA 117344 | |||||||| |||||||| Sbjct 258093 AGGGTCTTGAATCCAAAATA 258112 >seq109 Length=386716 Score = 214 bits (236), Expect = 2e-50 Identities = 1144/1811 (63%), Gaps = 49/1811 (3%) Strand=Plus/Minus Query 115560 GAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAA 115619 |||||||||||| || ||||| | || || ||| | | | |||||| |||| | Sbjct 266496 GAGGTAGTACATTCCAGTCTTCAAGCCAGCCTCCCAACCGAAGAAATGCATGGAGGTGAG 266437 Query 115620 CTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCG 115679 || ||||||| || | ||| | || | | ||||| |||||||||||| Sbjct 266436 TTTTTCAGTTGTTGGATTTGCTATGTGAACATTGAGAGACTGGGACTGATCGATGAAGGC 266377 Query 115680 TCCCCGATCCGCCGCCATATCAATCA-CATCCTTCATCTTG---ATTTCCCACACAGTTC 115735 || ||||| || ||||| | | | |||||| || | || ||||| || |||| Sbjct 266376 CCCACGATCAGCTGCCATCTTGAGGATCATCCT----CTGGGGAATCTCCCAGACTGTTC 266321 Query 115736 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCT 115795 |||| || ||| || || ||||||| |||| || ||||| |||||| | Sbjct 266320 TGTACAGTGCCTTGATGTCTGCTGGGATGCTGTCGATGTTCTGGATCGAGCCATTGTTCG 266261 Query 115796 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGA 115855 | || || | | |||| || | |||||| || |||| |||| || || Sbjct 266260 CTATTATCAGGTTCCTCATCTCGTCGTCCCAGAGGTTGCGCTCGGTGAGGTCCTTCAGGA 266201 Query 115856 GGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCG 115915 | || |||||| || || ||||| | | |||||| ||||| ||| | | Sbjct 266200 GATGGGGATTGACCACCTGGAATTCACCAGACAATACACGTCTCGAGTAGATATTGCTGG 266141 Query 115916 TGTATGGCTCAAAGCACTCATTGTTACCCAAGA-TTTGGGCTGTGGAGGCTGTGGGCATG 115974 |||| ||||| | | ||| ||||| ||||||| |||||||||| |||||||| ||||| Sbjct 266140 TGTAGGGCTCGATGGCCTCGTTGTT-CCCAAGAATTTGGGCTGTTGAGGCTGTTGGCATT 266082 Query 115975 GGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCC 116034 ||||||| || || ||| | || ||| ||| |||||||| || Sbjct 266081 GGTGCCAGTAGGAGAGAGTTCCTGATACCGTGTTTGGAAATTTTATCCTTGAGTTTAGCC 266022 Query 116035 CAGTCGTAGTTGAGCTTTGTC----TCCCCCTCCCACATATCAAACTGGAGGATACCTTG 116090 ||||| || || ||||| | | | ||||||| || |||||||||| || || Sbjct 266021 CAGTCCCAG---AGATTTGTTGGTGTTACAC-CCCACATGTCGTACTGGAGGATGCCCTG 265966 Query 116091 GGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCT 116150 | |||| || || | | ||||| || | ||||| ||| || | ||| | Sbjct 265965 GCTGACTGGTGAGCCTTTGTACGTCTCGTAGGTGCCCTTCTCCTGGGCGAGCTCGCATGA 265906 Query 116151 CGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTC 116210 |||||||| || ||| ||||| ||||| || || | ||| | | || ||| || Sbjct 265905 GGCCTCGAGTGCACCGTAATACAGGGTCTCGAAGATCTGGATATTGAGTTTCTGGGCGTC 265846 Query 116211 GTCGGAATCAAACGCGAGACGGCA-CAAAATAAATACATCCGCGAGACCTTGGACACCGA 116269 ||| || || | || | ||| || | |||| |||| || ||||| || || || | Sbjct 265845 ATCGCTGTCGAATG-GATAACGCATCAGTAGAAATGCATCTGCCAGACCCTGAACTCCAA 265787 Query 116270 GGCCAATTGGGCGATGTCTCATATT--AGACTTTCGAGCGGTCTCCACGGGATAAAAATT 116327 || || || || ||||||| || ||||||| | | ||| | || ||| ||| Sbjct 265786 TTCCCATGGGACGGTGTCTCACGTTGGAGACTTTTGCCTG--CTCAAGTGGGTAATGATT 265729 Query 116328 CCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 116387 ||||| || || | || ||| |||| ||||| || || | | ||||| | Sbjct 265728 GACGTCGATCACTCTGTCGAGGTTTCTGGTAACAACTTTGACGACTGTCTTCAGCTTCTT 265669 Query 116388 GTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATT 116447 | || || | || || || || || | || || || || |||| ||| Sbjct 265668 AAAGTCGTAAGTTTTTTTCACTGGATCCACGAACATGTTAACTGCAATCGAGGCCAAATT 265609 Query 116448 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACT 116507 || |||| | ||||| | |||||| | || || || ||||| || | Sbjct 265608 GCAAACAGCAATTTCATCGGGGCTCGAGTACTCCACGATCTCAGTGCACAAGTTGCTGCA 265549 Query 116508 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCAT 116567 || || || ||||||||||| ||||| || || ||| || || || ||||| ||||| Sbjct 265548 TTTTATCGTTCCCAAGTTCTTCTGATTGGATTTCCGGTTGCATGCGTCTTTGTACAGCAT 265489 Query 116568 ATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGCTGG 116627 || || ||||| ||||| ||| ||| | ||||| || |||| | ||| || Sbjct 265488 GTAGGGGGTCCCAGTCTCGACTTGTGACATAAGAATTGCAGTCCAGAGATCACGAGCCTT 265429 Query 116628 CACAGTGGCG-TTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTT 116686 ||| || || ||| || |||| | |||||| ||| |||||| ||||||||||| Sbjct 265428 CAC-CTGACGCTTGAAACGAGCCTCGTTCTCGTATTTTACGTAGAGATTCTCAAACTCTT 265370 Query 116687 CACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCAC 116746 ||||| || || | || ||||| || | || || | ||| ||| |||| Sbjct 265369 CACCCCAAGAGTCACAAAGGCCTGGACACTCGTGGGGGCACATCAGACTCCACATACCAT 265310 Query 116747 CCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGAC 116806 || || || || |||||||| || || || |||||||| || |||| || || || Sbjct 265309 CCGCCAGGACTCGTTTCATGAATAGATCAGGAATCCAGAGTGCGTAGAACAGCTCACGCG 265250 Query 116807 AGCGAGCTTCTTCATCCCC------CTGATTGAGACGCAACTCCAAAAAGTCCATGATAT 116860 | | ||| || | || || |||||| || | || || | ||| | Sbjct 265249 CTCTATATTCCTCCTTTCCTGTGTTCTTCTTGAGA------TCGAGAACATCAAAGATGT 265196 Query 116861 CCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG------ACCAGCCT 116914 | |||||||| || || || || | || | || || |||| ||| ||| Sbjct 265195 CAGCGTGCCAGGGCTCGAGATAAATGGCAAATGCGCC---AGGACGTTTGTTTCCACCCT 265139 Query 116915 GGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATT 116974 | | || || | || || || | || |||||||| || | | |||| ||| Sbjct 265138 GATCAACGTAACGTGCTGTGTTATTGTAAACACGAAGCATGGGTACAAGCCCATTGGATA 265079 Query 116975 GGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAA 117034 ||||| || || ||| || | | |||||||||| | ||| | | || |||| Sbjct 265078 CACCATTGGTACCAGCAATTCGTGTCCCCTTGGCTCTGATACAGTGAACATTCACTCCAA 265019 Query 117035 TACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGA 117094 |||| || || |||| || |||| ||| | |||| || ||||||| ||||||| Sbjct 265018 TACCACCAGCTGACTTGCTGACAAGTGCACACCTCTTGAGGGTGTCGTAGATGCCATCGA 264959 Query 117095 TCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAG 117154 | ||| | | ||| | ||||| ||||| ||||| ||| | | || | | Sbjct 264958 TGCTGTCCTCAGTCATTGTTAGAAGGAAACAGCTGGACATCTGTTGTATACAAGTGCAGG 264899 Query 117155 CGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTC 117213 | |||||||||||||| ||||| |||| || || | ||||| | | ||| ||| Sbjct 264898 CTGAGAAGAGGGTTGGTGATGCGTGAGTGAA-GTATCTCTCGGACAGATAGTTGTATGTC 264840 Query 117214 TCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTAT 117273 || | ||| || || || ||| |||| || || | | || | ||| | ||||| Sbjct 264839 TCAATGACCCTGGCGATATCCTCCTCGTGTATTCCCACAGCCACTCTCATCAGCATGTGG 264780 Query 117274 TGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTG 117333 || | || | | | |||| || |||| | ||||||||| |||| | ||||||| Sbjct 264779 GCAGGCCTCTCAACGACTTTGCCATTGATCCTCAGCAGGTAACTCCTCTCAAGGGTCTTG 264720 Query 117334 AGACCAAAATA 117344 | ||||| || Sbjct 264719 AAGCCAAAGTA 264709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613499209068720