Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq109 176 7e-39 seq113 172 9e-38 >seq109 Length=386716 Score = 176 bits (194), Expect = 7e-39 Identities = 458/687 (67%), Gaps = 20/687 (3%) Strand=Plus/Minus Query 203837 GTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATG 203896 |||||||| || ||||| || ||||| || ||| || || | || || |||||||| Sbjct 266543 GTCTTGTCGACAGTGAATTGGATGGCATTGGTGGCTGGTTTGGTCCTGAGGTAGTACATT 266484 Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956 || ||||| | ||| || ||| ||| | | |||||||| | ||||| ||| |||| Sbjct 266483 CCAGTCTTCAAGCCAGCCTCCCAACCGAAGAAATGCATGGAGGTGAGTTTT-TCA-GTTG 266426 Query 203957 --GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTG 204014 || | || ||||||| || ||||||||| || |||||||| | | | ||||| | Sbjct 266425 TTGGATTTGCTATGTGAACATTGAGAGACTGGGACTGATCGATGAAGGCCCCACGATCAG 266366 Query 204015 CGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGG 204074 | ||||| |||| || || |||| | ||||||||| || || || ||| | || Sbjct 266365 CTGCCATCTTGAGGATCATCCTCTGGGGAATCTCCCAGACTGTTCTGTACAGTGCCTTGA 266306 Query 204075 TGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCA-- 204131 ||| | || | || | | || ||| |||||||| |||| || || | ||| Sbjct 266305 TGTCTGCTGGGATG-CTGTCGATGTTCTGGATCGAGCCATTGTTCGCTATTA---TCAGG 266250 Query 204132 -TCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTG 204190 ||||| |||| || |||| | | | | | || ||| || || ||||| ||| Sbjct 266249 TTCCTCATCTCGTCGTCCCAGAGGTTGCGCTCGGTGAGGTCCTTCAGGAGATGGGGATTG 266190 Query 204191 ATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCG 204250 | | ||| || || || |||| || | || | | | | ||| ||||| | || ||| Sbjct 266189 ACCACCTGGAATTCACCAGACAATACACGTCTCGAGTAGATATTGCTGGTGTAGGGCTCG 266130 Query 204251 AACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGC 204310 | ||||||||||| || | ||| || || || ||| || ||||| || ||||| || Sbjct 266129 ATGGCCTCGTTGTTCCCAAGAATTTGGGCTGTTGAGGCTGTTGGCATTGGTGCCAGTAGG 266070 Query 204311 AGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATC 204370 || ||||| | | ||||| ||| | | ||| || | |||||| || Sbjct 266069 AGAGAGTTCCTGATACCGTGTTTGGAAATTTTATCCTTGAGTTTAGCCCAGTC--CCAGA 266012 Query 204371 GCACTG--GGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGC 204428 | || ||| | || |||||||||||| |||| | |||||| || |||||||| || Sbjct 266011 GATTTGTTGGTGTTACACCCCACATGTCGTACTGGAGGATGCCCTGGCTGACTGGTGAGC 265952 Query 204429 CCTTGTACGTCGGATAAGGCTGATCCTCTTCT--GCCAGCTTGCACGAGGCGGCCATGGC 204486 | ||||||||| || | || | ||| || || |||| ||| ||||| | | || Sbjct 265951 CTTTGTACGTCTCGTA--GGTGCCCTTCTCCTGGGCGAGCTCGCATGAGGCCTCGAGTGC 265894 Query 204487 GTGATAGTACATGGTCTCAAAGATCTG 204513 || |||| |||||| |||||||| Sbjct 265893 ACCGTAATACAGGGTCTCGAAGATCTG 265867 Score = 109 bits (120), Expect = 9e-19 Identities = 298/451 (66%), Gaps = 8/451 (2%) Strand=Plus/Minus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 |||||||||||| ||||||||||| | ||| || | | |||| | || ||| || || Sbjct 265578 CTCCACGATCTCAGTGCACAAGTTGCTGCATTTTATCGTTCCCAAGTTCTTCTGATTGGA 265519 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATCG 205002 || ||||| || | ||| ||||||| |||| | || | || |||| | || || Sbjct 265518 TTTCCGGTTGCATGCGTCTTTGTACAGCATGTAGGGGGTCCCAGTCTCGACTTGTGACAT 265459 Query 205003 CAGAATGTGGGTCCACAATTCGCGAGCCTCCACTT---GCTTCACGTACATCCCTTGAGA 205059 ||||| ||||| | || ||||||| ||| | |||| | || ||| | Sbjct 265458 AAGAATTGCAGTCCAGAGATCACGAGCCTTCACCTGACGCTTGA--AACGAGCCTCG-TT 265402 Query 205060 CTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACA 205119 |||||||||| ||| || | |||| || ||| | ||| || |||||||| Sbjct 265401 CTCGTATTTTACGTAGAGATTCTCAAACTCTTCACCCCAAGAGTCACAAAGGCCTGGACA 265342 Query 205120 TTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAGGTC 205179 | | ||| ||||||||| |||||| ||| | || | | ||| || || || Sbjct 265341 CTCGTGGGGGCACATCAGACTCCACATACCATCCGCCAGGACTCGTTTCATGAATAGATC 265282 Query 205180 GCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTA-ATTCCGTCGTCTCCAAGGTTCT 205238 ||||| || |||| ||||| ||||| || ||| ||||| || | ||| ||||| Sbjct 265281 AGGAATCCAGAGTGCGTAGAACAGCTCACGCGCTCTATATTCC-TCCTTTCCTGTGTTCT 265223 Query 205239 TTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTG 205298 | || | || || | | ||||| |||||||| ||||| | | | ||| | || Sbjct 265222 TCTTGAGATCGAGAACATCAAAGATGTCAGCGTGCCAGGGCTCGAGATAAATGGCAAATG 265163 Query 205299 CGCCTGGCCTCTTGTTCCCACCCTGGTCCAC 205329 |||| || | ||||| |||||||| || || Sbjct 265162 CGCCAGGACGTTTGTTTCCACCCTGATCAAC 265132 >seq113 Length=346302 Score = 172 bits (190), Expect = 9e-38 Identities = 515/776 (66%), Gaps = 28/776 (4%) Strand=Plus/Plus Query 203838 TCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGC 203897 ||||||| || ||||| |||||||| || ||| || | |||| || |||||||| | Sbjct 256279 TCTTGTCAACGGTGAATTGAATGGCATTGGTGGCTGGTTTTGTTCTGAGGTAGTACATTC 256338 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGT-TG 203956 | ||||| ||||| || ||| ||| | | |||||||| | || || ||| | | Sbjct 256339 CAGTCTTCAGGCCAGACTCCCATCCGAAGAAATGCATGGATGTGAGCTT-CTCGGGAGTT 256397 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016 || | ||||| |||| || |||||| ||||||||||| | | | ||||| || Sbjct 256398 GGATTTGCCATATGAACATTGGTGGACTGGGACTGGTCGATGAAGGCCCCACGATCAGCA 256457 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCT---G 204073 ||||| |||| || || |||| | ||| ||||| || || || ||| || || | Sbjct 256458 GCCATCTTGAGGATCATCCTCTGGGGAATTTCCCAGACTGTTCTGTACA-GTGCCTTGAG 256516 Query 204074 GTGTGTTGAGGCACATCTT-CCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCT-C 204130 || || || | || || | | || || ||||||||| ||| || || | ||| Sbjct 256517 GTCTGCTGGG----ATGTTGTCGATGTTCTGGATCGAGCCATTGCTCGCTATTA-TCTGG 256571 Query 204131 ATCCTCGTCTCCTCCCCCCACATGCCCAACCT-GATCAGCTCCCGCACCAGGTGGGGGTT 204189 || || | || || |||| | | || || | | || ||| || ||| ||||| || Sbjct 256572 TTCTTCATGTCGTCGTCCCAGA-GATCACGCTCGGTGAGGTCCTTCAGCAGATGGGGATT 256630 Query 204190 GATGATCTGAAAGTCTCCGGACAG--CACCCCTCGGGTGAACAGGTTGTTGGTGAATGGT 204247 || | || || || || ||||| ||| ||||| || | | |||| ||||| | || Sbjct 256631 GACTACTTGGAATTCACCAGACAGTACACGCCTCGCGT--AGATGTTGCTGGTGTAAGGC 256688 Query 204248 TCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGG 204307 || | ||||||||||| || | ||| || || || ||| || ||||| || ||||| Sbjct 256689 TCAATGGCCTCGTTGTTACCCAGAATTTGGGCTGTTGAGGCTGTTGGCATTGGTGCCAGT 256748 Query 204308 AGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGC 204367 || || ||||| | | ||||| ||| | | ||| || | |||||| | Sbjct 256749 AGGAGAGAGTTCCTAATACCGTGTTTAGATATTTTATCCTTGAGTTCAGCCCAGTC--CC 256806 Query 204368 ATCGCACTG--GGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGC 204425 | | || ||| | || ||||||||||| |||| | |||||| || |||||||| Sbjct 256807 AGAGATTTGTTGGTGTTACACCCCACATGTCATACTGGAGGATGCCCTGGCTGACTGGTG 256866 Query 204426 TGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCT--GCCAGCTTGCACGAGGCGGCCAT 204483 ||| ||||||||| || | || | ||| || || |||| ||| ||||| | | Sbjct 256867 AGCCTTTGTACGTCTCGTA--GGTGCCCTTCTCCTGGGCGAGCTCGCATGAGGCCTCGAG 256924 Query 204484 GGCGTGATAGTACATGGTCTCAAAGATCTGAACGTTTAATCTGGCGGCCTCCGTTCCGTC 204543 ||| ||| |||| |||||| |||||||| | || | | | |||||| | | ||| Sbjct 256925 GGCACCATAATACAGGGTCTCGAAGATCTGGATATTGAGTTTCTGGGCCTCATTGCTGTC 256984 Query 204544 AAACGCCAGACCCAGCATGGCAAACACGTCCGCCAAGCCCTGCACTCCGATTCCCA 204599 || | || || || ||| | || |||| ||||| ||||| ||||||| Sbjct 256985 GAATGGATAACGCATCAGTAGAAATGCATCTGCCAGACCCTGAACTCCAATTCCCA 257040 Score = 86.0 bits (94), Expect = 1e-11 Identities = 298/457 (65%), Gaps = 20/457 (4%) Strand=Plus/Plus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 ||| |||||||| || |||||||| | ||| || | | |||| | || ||| || || Sbjct 257243 CTCGACGATCTCAGTACACAAGTTGCTGCATTTTATCGTTCCCAAGTTCTTCTGATTGGA 257302 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATCG 205002 || | || || | ||||||||||| |||| | || |||| |||| | || || Sbjct 257303 TTTTCTATTGCATGCGTCCTTGTACAGCATGTAGGGAGTTCCAGTCTCGACTTGTGACAT 257362 Query 205003 CAGAATGTGGGTCCACAATTCGCGAGCCTCCACTT---GCTT--CACGTACATCCCTTGA 205057 ||||| ||||| | || ||||| | ||| | |||| ||| | || | Sbjct 257363 AAGAATTGCAGTCCAGAGCTCACGAGCTTTCACCTGACGCTTGAAACGGGCCTCTC---- 257418 Query 205058 GACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTC-CATCAGCCCTGG 205116 |||||| | |||||| ||| | | || || ||| | ||| ||| || ||||| Sbjct 257419 -CCTCGTACTGTGTGTAGAGCTTCTCGAATTCCTCACCCCAGGTGTCACAT-AGGCCTGG 257476 Query 205117 ACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTC---ACCCTCTCCATAAA 205173 ||||| | ||| ||||||||| ||||| |||||| | || | | ||| || Sbjct 257477 ACATTCGTGGGGGCACATCAGACTCCACA---CATCGTCCGCCAGAACACGTTTCATGAA 257533 Query 205174 CAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTA-ATTCCGTCGTCTCCAA 205232 | || |||||| || ||||||| || ||||| || | | ||||| || | ||| Sbjct 257534 TAAATCCGGGATCCAGAGTGCGTAAAAAAGTTCACGTGCTCGATATTCC-TCTTTTCCTG 257592 Query 205233 GGTTCTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAACCACACGG 205292 ||| || || | || || | | ||||| |||||||| ||||| | | | || Sbjct 257593 TGTTTTTCTTGAGATCGAGAACATCGAATATGTCAGCGTGCCAGGGCTCGAGATAAATGG 257652 Query 205293 CCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCAC 205329 | | ||| || || | ||||| |||||||| || || Sbjct 257653 CAAATGCTCCAGGACGTTTGTTTCCACCCTGATCAAC 257689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795144843103520