Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq37 96.9 2e-15 >seq37 Length=1171872 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| ||||| | ||| || || | || | ||| ||||||||| ||||| ||||||| Sbjct 189119 GCCTCCTCGAAGACGGAGAACGAGGTGGAGGGTGGATTCTTTTTGAATATTGTAATCGGA 189060 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 | | | | |||| ||||||||||| ||| |||| || |||||||| ||||| | || Sbjct 189059 AAGAGTTCTTCCATCCTCCAATTGTTTACCGGCAAAGATCAAACGCTGTTGATCTGGTGG 189000 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCAC 39671 | |||||||| || || || ||||| | | | ||||| | || || Sbjct 188999 GATACCTTCTTTATCTTGAATCTTAGCTTTAACATTTTCGATGGTGTCAGATGCCTCAAC 188940 Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||| ||||| ||||| || || | ||| |||||||| || ||||| Sbjct 188939 CTCCAGTGTAATGGTTTTGCCAGTCAGAGTCTTTACGAATATTTGCAT 188892 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 39504 ACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTC 39563 ||| || |||||||| | |||| ||||| || ||||| || || | | | | | | Sbjct 189335 ACGAAGAACCAAATGGAGAGTGGACTCTTTCTGGATATTGTAGTCCGAAAGAGTTCTTCC 189276 Query 39564 ATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTT 39623 ||| ||||||||||| || | || || ||||||||||| || | || | ||||||||| Sbjct 189275 ATCCTCCAATTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGTGGAATGCCTTCTTT 189216 Query 39624 GTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAAT 39683 ||| ||| || ||| | | | | |||||| | | ||| || || | || || Sbjct 189215 GTCCTGTATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCTTCAACTTCGAGGGTGAT 189156 Query 39684 TGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 || || || || | || |||||||| ||||||||| Sbjct 189155 CGTCTTTCCTGTAAGTGTCTTTACGAATATCTGCATG 189119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347365188623186