Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq425 147 2e-30 seq17 141 9e-29 seq37 131 2e-25 seq7 102 8e-17 >seq425 Length=33725 Score = 147 bits (162), Expect = 2e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || || || ||||| || ||||| |||||||||||| |||| || ||||| Sbjct 29924 AACATGCAGATCTTTGTTAAAACCCTAACGGGGAAAACCATCACCCTCGAGGTAGAGGCT 29865 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||||| | ||| | |||| ||||||| ||||| |||||||||||| | ||| Sbjct 29864 TCCGACACAATCGAAAATGTCAAAGCCAAAATCCAGGACAAGGAGGGAATTCCCCCAGAC 29805 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 |||||| |||| || | ||| || || ||||| || || | ||||| ||| || ||| Sbjct 29804 CAACAGAGGCTGATCTTCGCTGGTAAGCAGCTCGAAGATGGACGCACTCTCTCTGATTAC 29745 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 ||||| || |||||| | || || || ||||| ||| Sbjct 29744 AACATTCAGAAGGAATCAACACTTCACTTGGTACTG 29709 >seq17 Length=1605837 Score = 141 bits (156), Expect = 9e-29 Identities = 171/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || |||||||||||| | || |||||||| | Sbjct 83178 ATGCAGATCTTCGTCAAGACTCTCACAGGGAAAACCATCACCCTTGAGGTCGAGGCTTCA 83119 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | ||||| | || | ||||||| ||||| ||||| |||||| | ||||| Sbjct 83118 GACACCATCGAAAACG-TCAAGGCTAAAATCCAGGACAAGGAGGGGATTCCCCCAGACCA 83060 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | | || | ||| || ||||||||||| |||| ||||| ||| || ||||| Sbjct 83059 GCAGAGATTGATCTTCGCTGGAAAACAGCTGGAGGACGGACGCACACTCTCTGATTACAA 83000 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| |||||| | || || || || || || ||| | | || |||| Sbjct 82999 CATCCAGAAGGAATCCACTCTTCACTTAGTCCTCCGTCTCCGTGGGGGCC 82950 Score = 141 bits (156), Expect = 9e-29 Identities = 163/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || |||||||||||| | || |||||||| | Sbjct 83535 ATGCAGATCTTCGTCAAGACTCTCACAGGGAAAACCATCACCCTTGAGGTCGAGGCTTCA 83476 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | ||||| | || | ||||||| ||||| ||||| |||||| | ||||| Sbjct 83475 GACACCATCGAAAACG-TCAAGGCTAAAATCCAGGACAAGGAGGGGATTCCCCCAGACCA 83417 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | | || | ||| || ||||||||||| |||| ||||| ||| || ||||| Sbjct 83416 GCAGAGATTGATCTTCGCTGGAAAACAGCTGGAGGACGGACGCACACTCTCTGATTACAA 83357 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| |||||| | || || || || || || ||| Sbjct 83356 CATCCAGAAGGAATCCACTCTTCACTTAGTCCTCCGT 83320 Score = 140 bits (154), Expect = 3e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || |||||||||||| | || |||||||| | Sbjct 83763 ATGCAGATCTTCGTCAAGACCCTCACAGGGAAAACCATCACCCTTGAGGTCGAGGCGTCA 83704 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | ||| | || | ||||||| |||||||||||||||||| | ||||| Sbjct 83703 GACACCATCGAAAATGTCAAGGCTAAAATCCAGGACAAAGAGGGAATTCCCCCAGACCAG 83644 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | | || | ||| || ||||||||||| |||| ||||| || || |||||| Sbjct 83643 CAGAGATTGATCTTCGCTGGAAAACAGCTGGAGGACGGACGCACTCTTTCTGATTACAAC 83584 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| | || || || ||||| || || Sbjct 83583 ATCCAGAAGGAGTCTACCCTCCACTTGGTCCTTCG 83549 Score = 132 bits (146), Expect = 5e-26 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||||||||| |||||||| ||||| || |||||||| ||||||||| | || || ||||| Sbjct 84451 AAAAATGCAGATATTCGTGAAAACACTGACGGGCAAGACCATCACCCTAGAGGTTGAGGC 84392 Query 38300 CACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358 | || | | | |||| | || | ||||||| ||||| |||||||||||| | | Sbjct 84391 TTCGGATACTATTGAGAACG-TCAAGGCTAAAATCCAGGACAAGGAGGGAATTCCCCCAG 84333 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||| | | || | ||| || ||||||||||| |||| ||||| || || | Sbjct 84332 ACCAGCAGAGATTGATCTTCGCTGGAAAACAGCTGGAGGACGGACGCACTCTTTCTGATT 84273 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 | || ||||| ||||| | || || |||||||| || || Sbjct 84272 ATAATATCCAGAAGGAGTCTACCCTTCATTTGGTCCTTCG 84233 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || |||||||| ||| | || |||||||| | Sbjct 83991 ATGCAGATCTTCGTCAAGACTCTCACAGGGAAAACCATTACCCTTGAGGTCGAGGCGTCA 83932 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | ||||||| ||||| |||||||||||| | ||||| Sbjct 83931 GACACTATTGAGAACG-TCAAGGCTAAAATCCAGGACAAGGAGGGAATTCCCCCAGACCA 83873 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | | |||| ||| || ||||||||||| |||| ||||| || || ||||| Sbjct 83872 GCAGAGATTGATTTTCGCTGGAAAACAGCTGGAGGACGGACGCACTCTTTCTGATTACAA 83813 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| | || || |||||||| || || Sbjct 83812 TATCCAGAAGGAGTCTACCCTTCATTTGGTCCTTCG 83777 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || |||||||| ||| | || |||||||| | Sbjct 84219 ATGCAGATCTTCGTCAAGACCCTCACAGGGAAAACCATTACCCTTGAGGTCGAGGCGTCA 84160 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | ||| | || | ||||||| ||||| |||||||||||| | ||||| Sbjct 84159 GACACCATCGAAAATGTCAAGGCTAAAATCCAGGACAAGGAGGGAATTCCCCCAGACCAG 84100 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | | || | ||| || || || |||| || | ||||| ||| || |||||| Sbjct 84099 CAGAGATTGATCTTCGCTGGAAAGCAATTGGAAGATGGTCGCACACTCTCTGATTACAAC 84040 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| |||| || |||||||| || || Sbjct 84039 ATCCAGAAGGAGTCGACTCTTCATTTGGTCCTTCG 84005 >seq37 Length=1171872 Score = 131 bits (144), Expect = 2e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||||||||||||||| || || || ||||||||||||||| | || |||||||| | Sbjct 188663 AATGCAAATATTCGTAAAGACTCTGACTGGCAAAACCATCACCCTGGAGGTCGAGGCTTC 188722 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | ||| | || | || |||| ||||||||||||||||| | ||||| Sbjct 188723 TGACACCATTGAAAATGTCAAGGCCAAGATCCAGGACAAAGAGGGAATTCCTCCAGACCA 188782 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || || || | ||| || ||||| |||| || | | || || || ||||| Sbjct 188783 GCAACGTCTTATCTTCGCTGGTAAACAATTGGAGGATGGAAGAACTCTTTCAGATTACAA 188842 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || ||||||||| | || || || ||||| || ||| Sbjct 188843 TATTCAAAAGGAATCTACTCTTCACTTGGTCCTACGT 188879 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||||||||| || || || || || || |||||| |||| || || ||| | Sbjct 189120 ATGCAGATATTCGTAAAGACACTTACAGGAAAGACGATCACCCTCGAAGTTGAAGCCTCT 189179 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | |||| || || | |||||||| || ||||| | ||||| Sbjct 189180 GACACAATTGAAAATGTCAAAGCCAAGATACAGGACAAAGAAGGCATTCCACCAGACCAG 189239 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| || ||||| |||| || | | || || |||||||| Sbjct 189240 CAGCGTTTGATCTTCGCTGGTAAACAATTGGAGGATGGAAGAACTCTTTCGGACTACAAT 189299 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || || | || || |||||||| || ||| | || || || Sbjct 189300 ATCCAGAAAGAGTCCACTCTCCATTTGGTTCTTCGTCTCAGGGGTGG 189346 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||||||||||||||| || || || ||||||||||| || | || || ||||| | Sbjct 188891 AATGCAAATATTCGTAAAGACTCTGACTGGCAAAACCATTACACTGGAGGTTGAGGCATC 188950 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | ||| |||||| || || | || ||||| || || || | || || Sbjct 188951 TGACACCATCGAAAATGTTAAAGCTAAGATTCAAGATAAAGAAGGTATCCCACCAGATCA 189010 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | || || ||||| |||| || | | || || ||| ||||| Sbjct 189011 ACAGCGTTTGATCTTTGCCGGTAAACAATTGGAGGATGGAAGAACTCTTTCCGATTACAA 189070 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 || ||||| ||| | || || || | || || ||| | |||| ||| Sbjct 189071 TATTCAAAAAGAATCCACCCTCCACCTCGTTCTCCGTCTTCGAGGAGGC 189119 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || || || || || || || |||||||| | || || |||||| | Sbjct 189347 AATGCAGATTTTTGTCAAGACTCTGACTGGAAAGACCATCACACTTGAAGTAGAGGCCTC 189406 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | ||| | || | || |||| || || ||||| || || | || || Sbjct 189407 TGATACTATTGAAAATGTCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCTGATCA 189466 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || | || | ||| || ||||| ||||| || | | || ||| |||||||| Sbjct 189467 GCAACGTTTGATCTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTCTCAGACTACAA 189526 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| ||||| ||| |||| || || ||||| || ||| | ||||| || Sbjct 189527 CATTCAAAAAGAATCGACCCTTCACTTGGTTCTTCGTCTCAGAGGTGG 189574 >seq7 Length=2059422 Score = 102 bits (112), Expect = 8e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || | ||||| || || |||||| | || || ||| | | Sbjct 739942 AATGCAGATTTTCGTCAAGACTTTGACGGGAAAGACTATCACCCTTGAGGTTGAGCCTTC 739883 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | ||| | |||| || || | || |||||||||||||| | ||||| Sbjct 739882 TGATACCATCGAAAATGTCAAAGCCAAGATTCAGGATAAAGAGGGAATTCCTCCAGACCA 739823 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | |||| ||| || ||||| || || || | ||| || ||| || ||||| Sbjct 739822 ACAGCGATTGATTTTCGCTGGGAAACAACTCGAGGATGGGCGTACTCTCTCTGATTACAA 739763 Query 38423 CATCCAAAAGG 38433 ||||||||||| Sbjct 739762 CATCCAAAAGG 739752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500166285249280