Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq37 140 1e-27 seq1 131 7e-25 seq7 123 1e-22 seq9 113 2e-19 seq76 111 6e-19 seq425 105 3e-17 seq17 95.1 5e-14 >seq37 Length=1171872 Score = 140 bits (154), Expect = 1e-27 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || |||||||| ||||| ||||| || || ||||| |||| Sbjct 188891 AATGCAAATATTCGTAAAGACTCTGACTGGCAAAACCATTACACTGGAGGTTGAGGCATC 188950 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | ||| ||| | ||||| || ||||||||||| ||||| || || || ||||| Sbjct 188951 TGACACCATCGAAAATGTTAAAGCTAAGATTCAAGATAAAGAAGGTATCCCACCAGATCA 189010 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| ||||| || || | || |||||| | || |||||||||||| | | ||||| || Sbjct 189011 ACAGCGTTTGATCTTTGCCGGTAAACAATTGGAGGATGGAAGAACTCTTTCCGATTACAA 189070 Query 391229 TATTGATAAGGATGCAACACTTCAC 391253 |||| | || || | || || ||| Sbjct 189071 TATTCAAAAAGAATCCACCCTCCAC 189095 Score = 127 bits (140), Expect = 8e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || |||||||| ||||| || || || || || || | || Sbjct 188663 AATGCAAATATTCGTAAAGACTCTGACTGGCAAAACCATCACCCTGGAGGTCGAGGCTTC 188722 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | ||||||| | | || || || || || || || ||||||||||| || || Sbjct 188723 TGACACCATTGAAAATGTCAAGGCCAAGATCCAGGACAAAGAGGGAATTCCTCCAGACCA 188782 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||| | || ||| | || |||||| | || |||||||||||| | | ||||| || Sbjct 188783 GCAACGTCTTATCTTCGCTGGTAAACAATTGGAGGATGGAAGAACTCTTTCAGATTACAA 188842 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 |||| | ||||| | || |||||||| || Sbjct 188843 TATTCAAAAGGAATCTACTCTTCACTTGGT 188872 Score = 127 bits (140), Expect = 8e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| || || || |||||||| || || || || ||||| || || | || Sbjct 189347 AATGCAGATTTTTGTCAAGACTCTGACTGGAAAGACCATCACACTTGAAGTAGAGGCCTC 189406 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| |||||| | | || || || || |||||||| || || ||||||||||| Sbjct 189407 TGATACTATTGAAAATGTCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCTGATCA 189466 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||||| || ||| | || |||||||| || ||||| |||||| | | || || || Sbjct 189467 GCAACGTTTGATCTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTCTCAGACTACAA 189526 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | || || | || |||||||| || Sbjct 189527 CATTCAAAAAGAATCGACCCTTCACTTGGT 189556 Score = 104 bits (114), Expect = 9e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || ||||| || || || || || || || || |||||| | ||| Sbjct 189120 ATGCAGATATTCGTAAAGACACTTACAGGAAAGACGATCACCCTCGAAGTTGAAGCCTCT 189179 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | | ||| || || || || || ||||| ||||| || || || Sbjct 189180 GACACAATTGAAAATGTCAAAGCCAAGATACAGGACAAAGAAGGCATTCCACCAGACCAG 189239 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||||| || ||| | || |||||| | || |||||||||||| | |||| || ||| Sbjct 189240 CAGCGTTTGATCTTCGCTGGTAAACAATTGGAGGATGGAAGAACTCTTTCGGACTACAAT 189299 Query 391230 AT 391231 || Sbjct 189300 AT 189301 Score = 89.7 bits (98), Expect = 2e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 ||||||| ||||||| | | || || || || || || || ||||||||||| || Sbjct 188493 TCTGATACCATTGAAAATGTCAAGGCCAAGATCCAGGACAAAGAGGGAATTCCTCCAGAC 188552 Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226 || |||||| | || ||| | || || || ||||| ||||| |||||| | | ||||| Sbjct 188553 CAGCAACGTCTTATCTTCGCTGGTAAGCAGCTTGAGGATGGCAGAACTCTTTCAGATTAC 188612 Query 391227 AATATTGATAAGGATGCAACACTTCACTTAGT 391258 || ||| | ||||| | || |||||||| || Sbjct 188613 AACATTCAAAAGGAATCGACTCTTCACTTGGT 188644 >seq1 Length=5503185 Score = 131 bits (144), Expect = 7e-25 Identities = 446/690 (65%), Gaps = 10/690 (1%) Strand=Plus/Minus Query 450918 TTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAG 450977 |||| || || || || || || | || ||||| || || | || ||||||| || | Sbjct 3791177 TTGGGATAGACCTGGGTACGACGTACTCGTGTGTGGGAGTGTGGCAGCATGGAAAAGTCG 3791118 Query 450978 AAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGATT 451037 | || || || || || |||||| | || || || || | || || ||||| Sbjct 3791117 AGATAATCGCTAACGATCAAGGAAATAGGACGACACCATCTTACGTGGCCTTCACGGACA 3791058 Query 451038 CAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAAAACAC 451095 |||| ||||| | || | ||||| || ||||| || ||| ||| ||||| Sbjct 3791057 CAGAGAGACTGATCGGTGATGCTGCCAAGAATCAAGTTGCCATG--AATCCCACTAACAC 3791000 Query 451096 AGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAGA 451155 ||||| ||||| ||||| | ||||| ||| || ||||| | || ||| | || Sbjct 3790999 AGTATTCGATGCCAAACGACTGATTGGGCGTCGTTACGATGACTCAAAGGTGCAACAGGA 3790940 Query 451156 GAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAAA 451215 || || | | | | || ||||| || |||||||| | ||||| || | Sbjct 3790939 TCTCAAGCACTGGCCATTTAAAGTTATAAATGAAGGTGGAAAGCCGAAAATTCAGGTGGA 3790880 Query 451216 TTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAA 451275 | ||||| || ||| ||||| || || |||||| || ||| | || || Sbjct 3790879 CTTCAAAGGGGAGCGCAAAGTGTTTGCCCCGGAGGAAATTAGCTCCATGATCCTCGTGAA 3790820 Query 451276 AATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGT 451335 ||| ||| ||| | || | | | || | | || || || || || || || Sbjct 3790819 GATGCGAGAGACATCTGAGGCCTTTCTCGGGTTTAATGTCCGAGACGCTGTGATAACGGT 3790760 Query 451336 TCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGG 451395 ||| ||||||||||||||| | ||||| || ||||| || || ||||| ||||| || Sbjct 3790759 TCCAGCTTATTTCAATGATTCTCAACGTCAGGCAACCAAGGACGCAGGTGCAATTGCAGG 3790700 Query 451396 TTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGG 451455 | |||||||| ||||| || || ||||| |||||||| ||||| || || ||| | || Sbjct 3790699 ACTCAATGTTCTGCGAATAATAAACGAACCGACAGCAGCGGCTCTGGCTTACGGA-TTGG 3790641 Query 451456 AAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCA 451515 | || || | || || || |||||||| |||| || | || ||||| || Sbjct 3790640 ATAA--GAATCTCAAAGGCGAGAAGAATATTTTGATATTCGACCTGGGGGGAGGTACCTT 3790583 Query 451516 TGATACTTCTGTACTTTCAATTGAAGATGG---GGTATTTGAAGTAAAGGCAACCAATGG 451572 || || | || || || || || || | |||| || ||||| ||||| ||| Sbjct 3790582 CGACGTGTCGATTCTCTCTATCGACGAGGGATCGCTATTCGAGGTAAAAGCAACTGCTGG 3790523 Query 451573 TGATACTCATCTAGGAGGTGAAGATATTGA 451602 || |||||||| || || || || |||| Sbjct 3790522 AGACACTCATCTCGGGGGAGAGGACTTTGA 3790493 Score = 109 bits (120), Expect = 2e-18 Identities = 253/382 (66%), Gaps = 6/382 (2%) Strand=Plus/Minus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050 ||||| ||||| ||||| || |||||||| || || || || || |||||||| || | Sbjct 3790104 AATCCCGATGAGGCTGTCGCCTATGGTGCAGCTGTACAGGCTGCAATTCTAACTGGAGCT 3790045 Query 452051 GATGATGAAAAATTAGGA------GATATTCTGTTAGTAGATGTAACACCTCTATCTCTT 452104 | || | | | | ||| |||| | || ||||| ||||| | ||||| Sbjct 3790044 GGAAATACGAGTTCTGCACTTCAGGATGTTCTACTCGTGGATGTGACACCGTTGTCTCTG 3789985 Query 452105 GGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCT 452164 || |||| ||||||||||| ||||||| | ||| || ||||| | ||||| Sbjct 3789984 GGGATTGAGACAGCTGGTGGCGTGATGACGACTTTGATCGAACGAAACGCGAGAATTCCA 3789925 Query 452165 TGTAAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAA 452224 || || ||| || | ||||| || ||||| ||||| || || | |||| Sbjct 3789924 TGCAAGCAGATGCAGATATTTACGACTTATTCGGATAATCAACCGGGGGTGGCGGTTCAG 3789865 Query 452225 GTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTT 452284 ||||| || ||||| | || ||||| ||||||||| || ||| | ||| ||| Sbjct 3789864 GTGTTCGAGGGAGAGAGGGCTATGACGAAGGATAATAATCTGCTTGGAAATTTTGATCTC 3789805 Query 452285 TCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGAT 452344 || || | || ||||||||| || |||| ||| | || | |||| | ||| Sbjct 3789804 TCTGGAATAGCACCCGCTCCAAGGGGAGTGCCAAAAATCGAAGTGACTTTTGATCTGGAT 3789745 Query 452345 GCAAATGGTATTCTTAATGTGA 452366 || ||||| |||||| |||||| Sbjct 3789744 GCCAATGGAATTCTTCATGTGA 3789723 >seq7 Length=2059422 Score = 123 bits (136), Expect = 1e-22 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || || |||| || || ||||| || ||||| ||||| | || Sbjct 739942 AATGCAGATTTTCGTCAAGACTTTGACGGGAAAGACTATCACCCTTGAGGTTGAGCCTTC 739883 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| ||| ||| | | ||| || ||||| ||||| || ||||||||||| || || Sbjct 739882 TGATACCATCGAAAATGTCAAAGCCAAGATTCAGGATAAAGAGGGAATTCCTCCAGACCA 739823 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| || || |||||| | ||||||||||| || ||||| | ||| | | ||||| || Sbjct 739822 ACAGCGATTGATTTTCGCTGGGAAACAACTCGAGGATGGGCGTACTCTCTCTGATTACAA 739763 Query 391229 TATTGATAAGG 391239 || | |||| Sbjct 739762 CATCCAAAAGG 739752 >seq9 Length=1896649 Score = 113 bits (124), Expect = 2e-19 Identities = 181/255 (71%), Gaps = 5/255 (2%) Strand=Plus/Plus Query 451259 TCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTAC- 451317 || ||||| | || || ||||| || ||||| || |||| | || || ||| Sbjct 530083 TCCATGGTCTTGACCAAGATGAAGGAGACAGCTGAGGCATATCTCGGGGAGA-AGGTACG 530141 Query 451318 TGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGA 451377 ||| || || || || ||||| || |||||||| ||| ||||||| |||||||||||||| Sbjct 530142 TGACGCTGTCATCACAGTTCCAGCATATTTCAACGATTCACAACGTCAAGCAACTAAAGA 530201 Query 451378 TGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGC 451437 ||| || ||| ||||| | ||||| || ||||||| || ||||| ||||| || || Sbjct 530202 TGCTGGTGTTATCGCTGGAATTAATGTACTCAGAATTATCAACGAACCAACAGCTGCGGC 530261 Query 451438 TCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGA 451497 || || |||||| | ||| || | ||| || || | ||| || | ||||||| Sbjct 530262 ACTCGCCTATGGA-TTGGATAAGAACTTGAA--AGGTGAGAGGAATGTTCTCATATTTGA 530318 Query 451498 TTTTGGTGGAGGAAC 451512 | | ||||| || || Sbjct 530319 TCTCGGTGGTGGTAC 530333 >seq76 Length=671789 Score = 111 bits (122), Expect = 6e-19 Identities = 195/281 (69%), Gaps = 10/281 (4%) Strand=Plus/Plus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTT-- 452048 ||||| ||||| || ||||| ||||| || || ||||| ||||||||||| || ||| Sbjct 8500 AATCCGGATGAGGCCGTTGCTTATGGAGCAGCTGTTCAGGCAGCTATTCTCACTGGTGAA 8559 Query 452049 ---CAGATGATGAAAAATTAGGAG-ATATTCTGTTAGTAGATGTAACACCTCTATCTCTT 452104 |||| || | | || || |||| | || ||||| | || | || | Sbjct 8560 GGGCAGAAGAGCCAGTCTCTTCAGGATGTTCTACTCGTGGATGTGGCTCCATTGTCCTTG 8619 Query 452105 GGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTC--TATTC 452162 ||| |||| || ||||||||||||||||| ||| | ||| | ||| || | | |||| Sbjct 8620 GGAATTGAGACCGCTGGTGGAATGATGACGAATATCATTGA--GAGAAATTCCAGAATTC 8677 Query 452163 CTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTC 452222 | || ||| ||||||| || || | || ||| || || |||| ||| ||||||| Sbjct 8678 CATGCAAACAGAGTCAGACCTTCACGACTTATGCTGACAATCAGCCAGCTGTGACTATTC 8737 Query 452223 AAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAAT 452263 | |||| || || |||||||| ||||| ||||||||| Sbjct 8738 AGGTGTACGAGGGTGAACGTGCCATGACGAAGGATAATAAT 8778 >seq425 Length=33725 Score = 105 bits (116), Expect = 3e-17 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || |||||||| || || || ||||| || || || || || || | || Sbjct 29921 ATGCAGATCTTTGTTAAAACCCTAACGGGGAAAACCATCACCCTCGAGGTAGAGGCTTCC 29862 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || ||| | | ||| ||||| || || ||||| |||||||| || || ||| Sbjct 29861 GACACAATCGAAAATGTCAAAGCCAAAATCCAGGACAAGGAGGGAATTCCCCCAGACCAA 29802 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || ||| | || || || || ||||||||| | ||| | | ||||| || Sbjct 29801 CAGAGGCTGATCTTCGCTGGTAAGCAGCTCGAAGATGGACGCACTCTCTCTGATTACAAC 29742 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGA 391265 ||| | ||||| ||||||||||||| ||| | ||| Sbjct 29741 ATTCAGAAGGAATCAACACTTCACTTGGTACTGAGA 29706 >seq17 Length=1605837 Score = 95.1 bits (104), Expect = 5e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| ||||||||||| || || || || || || || ||||| | || Sbjct 84448 AATGCAGATATTCGTGAAAACACTGACGGGCAAGACCATCACCCTAGAGGTTGAGGCTTC 84389 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| ||||| | || ||||| || || ||||| |||||||| || || || Sbjct 84388 GGATACTATTGAGAACGTCAAGGCTAAAATCCAGGACAAGGAGGGAATTCCCCCAGACCA 84329 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || | || || ||| | || ||||| || || || ||| | ||| | | |||||||| Sbjct 84328 GCAGAGATTGATCTTCGCTGGAAAACAGCTGGAGGACGGACGCACTCTTTCTGATTATAA 84269 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| | || ||||| || || Sbjct 84268 TATCCAGAAGGAGTCTACCCTTCATTTGGT 84239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975692022924536