Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq109 188 9e-43 >seq109 Length=386716 Score = 188 bits (208), Expect = 9e-43 Identities = 1100/1739 (63%), Gaps = 51/1739 (3%) Strand=Plus/Plus Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678 ||||| | ||| | || || | || || || | ||| ||||| | || | |||| Sbjct 264782 ACATGCTGATGAGAGTGGCTGTGGGAATACACGAGGAGGATATCGCCAGGGTCATTGAGA 264841 Query 111679 CATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCT 111737 ||||| || | ||||| | | || |||| |||||| |||||||||||||| || Sbjct 264842 CATACAACTATCTGTCCGAGAGATAC-TTCACTCACGCATCACCAACCCTCTTCTCAGCC 264900 Query 111738 GGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATC 111797 | || | || || |||||||| ||||||||| | ||| | ||||| ||| Sbjct 264901 TGCACTTGTATACAACAGATGTCCAGCTGTTTCCTTCTAACAATGACTGAGGACAGCATC 264960 Query 111798 AATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATC 111857 ||||||| |||| ||| |||| ||||| | || |||| ||||||||||| Sbjct 264961 GATGGCATCTACGACACCCTCAAGAGGTGTGCACTTGTCAGCAAGTCAGCTGGTGGTATT 265020 Query 111858 GGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAA 111917 || || | | || | |||||||||| | | || ||| ||||| |||||| | Sbjct 265021 GGAGTGAATGTTCACTGTATCAGAGCCAAGGGGACACGAATTGCTGGTACCAATGGTGTA 265080 Query 111918 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAA 111977 || |||| || | || |||||||| || | || |||||| || || || | || Sbjct 265081 TCCAATGGGCTTGTACCCATGCTTCGTGTTTACAATAACACAGCACGTTACGTTGATCAG 265140 Query 111978 GCTGGGCGTCGCAAGGGATCTATCGCAGTC------TATCTTGAGCCATGGCACGCGGAT 112031 | ||| ||| | || |||| | ||||| ||||| |||||||| || Sbjct 265141 GGTGGAAA---CAAACGTCCTGGCGCATTTGCCATTTATCTCGAGCCCTGGCACGCTGAC 265197 Query 112032 ATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAG----GCGCGGTGCCG 112087 ||| | || | || || | ||| ||| | ||||| | ||| || Sbjct 265198 ATCTTTGATGTTCTCGATCTCAAGAAGAACACAGGAAAGGAGGAATATAGAGCG----CG 265253 Query 112088 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 112147 || || |||| ||| ||||||||||| ||||| |||||||| |||| || | ||| Sbjct 265254 TGAGCTGTTCTACGCACTCTGGATTCCTGATCTATTCATGAAACGAGTCCTGGCGGATGG 265313 Query 112148 CAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGA 112207 | ||| ||| | || || || || || || || | || | |||||| || Sbjct 265314 TATGTGGAGTCTGATGTGCCCCCACGAGTGTCCAGGCCTTTGTGACTCTTGGGGTGAAGA 265373 Query 112208 GTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGAC-GGTGCCAG 112266 |||||| |||||| ||| |||||| | || ||| | ||| | |||| | Sbjct 265374 GTTTGAGAATCTCTACGTAAAATACGAGAACGAGGCTCGTTTCAA-GCGTCAGGTGAAGG 265432 Query 112267 CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGC 112326 || ||| | |||| || ||||| | ||| ||| ||||||||| || || || |||| Sbjct 265433 CTCGTGATCTCTGGACTGCAATTCTTATGTCACAAGTCGAGACTGGGACCCCCTACATGC 265492 Query 112327 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 112386 | ||||||||||| || |||| || ||||| ||||| ||||| ||| || | Sbjct 265493 TGTACAAAGACGCATGCAACCGGAAATCCAATCAGAAGAACTTGGGAACGATAAAATGCA 265552 Query 112387 CCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 112446 |||| | || || || ||| |||| | | | ||||| | ||||| || || Sbjct 265553 GCAACTTGTGCACTGAGATCGTGGAGTACTCGAGCCCCGATGAAATTGCTGTTTGCAATT 265612 Query 112447 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 112506 | || || || || | || || |||||||||| || ||| || | || | | | | Sbjct 265613 TGGCCTCGATTGCAGTTAACATGTTCGTGGATCCAGTGAAAAAAACTTACGACTTTAAGA 265672 Query 112507 AACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATT 112566 | || | ||| ||| ||| || | |||||| ||||||| || || ||| Sbjct 265673 AGCTGAAGACAGTCGTCAAAGTTGTTACCAGAAACCTCGACAGAGTGATCGACGTCAATC 265732 Query 112567 TTTACCCCGTTGAGACTGCTCGTAAATCT--AATATGAGACACCGTCCAATTGGTCTCGG 112624 |||||| ||||| | | | || ||| || ||||||||||||| || || | || Sbjct 265733 ATTACCCACTTGAG-CAG-GCAAAAGTCTCCAACGTGAGACACCGTCCCATGGGAATTGG 265790 Query 112625 TGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGC 112684 || || ||||| || |||| ||| | || || | |||| || ||| || || Sbjct 265791 AGTTCAGGGTCTGGCAGATGCATTTCTACTGATGCGTTATCCATTCGACAGCGATGACGC 265850 Query 112685 GAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTC 112744 || || ||||| | || || ||||| ||||| ||| || || ||||| | Sbjct 265851 CCAGAAACTCAATATCCAGATCTTCGAGACCCTGTATTACGGTGCACTCGAGGCCTCATG 265910 Query 112745 GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA--CAA 112802 ||| | || ||| | || | || || || | | || || |||| ||| || Sbjct 265911 CGAGCTCGCCCAGGAGAAGGGCACCTACGAGACGTACAAAGGCTCACCAG--TCAGCCAG 265968 Query 112803 GGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA-GCTTCACTACGACTGGGACGC 112861 || | || || | || ||||||| || | ||||| || || ||||||| Sbjct 265969 GGCATCCTCCAGTACGACATGTGGG-GTGTAACACCAACAAATCTCTGGGACTGGGCTAA 266027 Query 112862 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCC 112921 |||||||| || | | ||| | | ||| ||| | ||||||||||||| Sbjct 266028 ACTCAAGGATAAAATTTCCAAACACGGTATCAGGAACTCTCTCCTACTGGCACCAATGCC 266087 Query 112922 AACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGA 112980 ||||||||| || || |||| ||||||| || || || | | || |||||||| | | Sbjct 266088 AACAGCCTCAACAGCCCAAATTCTTGGG-AACAACGAGGCCATCGAGCCCTACACCAGCA 266146 Query 112981 ACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGG 113040 | ||||| |||| | | | || || || | | ||||| |||||| || Sbjct 266147 ATATCTACTCGAGACGTGTATTGTCTGGTGAATTCCAGGTGGTCAATCCCCATCTCCTGA 266206 Query 113041 ATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCG- 113099 | ||||||| ||| |||||| | | || ||| |||| | || | | |||| Sbjct 266207 AGGACCTCACCGAGCGCAACCTCTGGGACGACGAGATG-AGGA--ACCTGATAATAGCGA 266263 Query 113100 --GGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCA 113157 ||| || || || || || | || |||| || || ||| ||||| | | Sbjct 266264 ACAATGGCTCGATCCAGAACATCGACAGCATCCCAGCAGACATCAAGGCACTGTACAGAA 266323 Query 113158 CAGTTTGGGAAAT---CAAGATGAAGGATG-TCATTGACATGGCCGCAGATCGTGGTCGC 113213 |||| ||||| || | || |||||| || | | ||||| || |||||||| | Sbjct 266324 CAGTCTGGGAGATTCCCCAG----AGGATGATCCTCAAGATGGCAGCTGATCGTGGGGCC 266379 Query 113214 TTCATTGATCAAAGTCAAAG--TATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGC 113271 ||||| |||| |||| || | | ||| | ||| | || |||||| | || | Sbjct 266380 TTCATCGATC--AGTCCCAGTCTCTCAATGTTCACATAGCAAATCCAACAACTGAAAAAC 266437 Query 113272 TCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTC 113330 || | || ||||| | | | ||||| || || | || || || ||||| |||||| Sbjct 266438 TCACCTCCATGCATTTCTTCGGTTGGGAGGCTGGCTTGAAGACTGGAATGTACTACCTC 266496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620734314830240