Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq109 223 4e-53 seq113 190 2e-43 >seq109 Length=386716 Score = 223 bits (246), Expect = 4e-53 Identities = 939/1460 (64%), Gaps = 31/1460 (2%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGA 105993 ||||| || | |||||||| || | | || || || ||||||| |||| || || || Sbjct 266153 TAGATATTGCTGGTGTAGGGCTCGATGGCCTCGTTGTT-CCCAAGAATTTGGGCTGTTGA 266095 Query 105994 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTC 106053 |||||||||||||||||||| | ||| ||| | | ||| | || || || Sbjct 266094 GGCTGTTGGCATTGGTGCCAGTAGGAGAGAGTTCCTGATACCGTGTTTGGAAATTTTATC 266035 Query 106054 CTTGAGAACATCCCAGTCGTAG----TTGAGCTTGGTTTCACCTTCCCACATATCAAATT 106109 |||||| | ||||||| || ||| ||||| | || ||||||| || | | Sbjct 266034 CTTGAGTTTAGCCCAGTCCCAGAGATTTG---TTGGTGTTACAC-CCCACATGTCGTACT 265979 Query 106110 GAAGCACCCCTTGG--GACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC 106167 | || | || ||| ||| | ||| || | | ||||| |||| || | | | Sbjct 265978 GGAGGATGCCCTGGCTGACTGGTGAG--CCTTTGTACGTCTCGTAGGTGCCCTTCTCCTG 265921 Query 106168 AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 106227 || | || || ||||| || | ||| ||||| ||| || ||||| | ||| Sbjct 265920 GGCGAGCTCGCATGAGGCCTCGAGTGCACCGTAATACAGGGTCTCGAAGATCTGGATATT 265861 Query 106228 CATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAG 106287 | | || ||| ||||| || |||| || || || | |||| |||| || || Sbjct 265860 GAGTTTCTGGGCGTCATCGCTGTCGAATGGATAACGCATCAGTAGAAATGCATCTGCCAG 265801 Query 106288 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATT--AGACTTTCGCGCAGTCTCA 106345 ||| ||||| || | || || || | ||||| || || ||||||| || | | |||| Sbjct 265800 ACCCTGAACTCCAATTCCCATGGGACGGTGTCTCACGTTGGAGACTTTTGC-CTG-CTCA 265743 Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGT-GAT 106404 | || ||| ||| ||| || |||| || || ||| ||||||||| ||||| || Sbjct 265742 AGTGGGTAATGATTGACGTCGATCACTCTGTCGAGGTTTCTGGTAACAA-CTTTGACGAC 265684 Query 106405 TTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGC 106464 | | || || | | | || |||| || || || || || | || || Sbjct 265683 TGTCTTCAGCTTCTTAAAGTCGTAAGTTTTTTTCACTGGATCCACGAACATGTTAACTGC 265624 Query 106465 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 106524 || || ||||||||||||||||| | ||||| | |||||| | || || || Sbjct 265623 AATCGAGGCCAAATTGCAAACAGCAATTTCATCGGGGCTCGAGTACTCCACGATCTCAGT 265564 Query 106525 ACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGC 106584 ||||||||| | || ||||| ||||| ||||| || || || |||||| || Sbjct 265563 GCACAAGTTGCTGCATTTTATCGTTCCCAAGTTCTTCTGATTGGATTTCCGGTTGCATGC 265504 Query 106585 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644 || ||||| ||||||||||| ||||| ||||| |||||| | |||||||| |||| Sbjct 265503 GTCTTTGTACAGCATGTAGGGGGTCCCAGTCTCGACTTGTGACATAAGAATTGCAGTCCA 265444 Query 106645 CACATCGGCGGCTGGTACAATGGCG-TTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGA 106703 | ||| || || || || ||| || |||| |||||| ||| ||||| Sbjct 265443 GAGATCACGAGCCTTCACC-TGACGCTTGAAACGAGCCTCGTTCTCGTATTTTACGTAGA 265385 Query 106704 GGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAA 106763 | |||||||| |||||| | ||| | || ||||| || || || || | | Sbjct 265384 GATTCTCAAACTCTTCACCCCAAGAGTCACAAAGGCCTGGACACTCGTGGGGGCACATCA 265325 Query 106764 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATG 106823 || ||| |||| || || || || |||||||| || || |||||||| || | Sbjct 265324 GACTCCACATACCATCCGCCAGGACTCGTTTCATGAATAGATCAGGAATCCAGAGTGCGT 265265 Query 106824 AAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC-TCAAGGAAC 106882 | || || || | | | || || | ||| ||| || | | || || | Sbjct 265264 AGAACAGCTCACGCGCTCTATATTCCTCCTTTCCTGTGTTCT-TCTTGAGATCGAGAACA 265206 Query 106883 TCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACG 106938 || | ||| || |||||||| ||||| ||||| | || | | || | || | Sbjct 265205 TCAAAGATGTCAGCGTGCCAGGGCTCGAGATAAATGGCAAATGCGCCAGGACGTTTGTTT 265146 Query 106939 CCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACC 106998 || | | |||| || || || |||||| || | || |||||||| || | || || Sbjct 265145 CC-ACCCTGATCAACGTAACGTGCTGTGTTATTGTAAACACGAAGCATGGGTACAAGCCC 265087 Query 106999 ATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTG 107058 || ||| |||||| || || ||| || | |||||||| | | || | | Sbjct 265086 ATTGGATACACCATTGGTACCAGCAATTCGTGTCCCCTTGGCTCTGATACAGTGAACATT 265027 Query 107059 CATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGAT 107118 || |||||||| ||||| |||| || | |||||| | | || || | ||||| Sbjct 265026 CACTCCAATACCACCAGCTGACTTGCTGACAAGTGCACACCTCTTGAGGGTGTCGTAGAT 264967 Query 107119 ACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGG 107178 || | ||| |||||| | | | | |||||| || ||||||||||| || | Sbjct 264966 GCCATCGATGCTGTCCTCAGTCATTGTTAGAAGGAAACAGCTGGACATCTGTTGTATACA 264907 Query 107179 TGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGT 107237 || | || |||||||||||||| ||||||| |||| || || | ||||| | || Sbjct 264906 AGTGCAGGCTGAGAAGAGGGTTGGTGATGCGTGAGTGAA-GTATCTCTCGGACAGATAGT 264848 Query 107238 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAA 107297 ||||||||| | ||| | || || ||| |||| || || | ||||| | ||| | Sbjct 264847 TGTATGTCTCAATGACCCTGGCGATATCCTCCTCGTGTATTCCCACAGCCACTCTCATCA 264788 Query 107298 ACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAA 107357 ||||| || | || | || |||||| || || | || || ||| |||||| Sbjct 264787 GCATGTGGGCAGGCCTCTCAACGACTTTGCCATTGATCCTCAGCAGGTAACTCCTCTCAA 264728 Query 107358 GGGTTTTGAGACCAAAGTAA 107377 |||| |||| ||||||||| Sbjct 264727 GGGTCTTGAAGCCAAAGTAA 264708 >seq113 Length=346302 Score = 190 bits (210), Expect = 2e-43 Identities = 1109/1752 (63%), Gaps = 71/1752 (4%) Strand=Plus/Plus Query 105589 TCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGA 105648 || ||| |||||||| || ||||| || || | ||| || | | |||||| || | Sbjct 256322 TCTGAGGTAGTACATTCCAGTCTTCAGGCCAGACTCCCATCCGAAGAAATGCATGGATGT 256381 Query 105649 GAGCTT----GGACATCGTTGGACTTTCCATGAAAAGATTCAT--ACTTTGACTCTGGTC 105702 |||||| ||| |||||| || |||| || ||| | ||| |||| |||| Sbjct 256382 GAGCTTCTCGGGA----GTTGGATTTGCCATATGAACATTGGTGGACTGGGACT--GGTC 256435 Query 105703 AATGAAGCGACCACGTTGTGCCGCCATATCAATGA-CATCCTTCATCTTG---ATTTCCC 105758 |||||| ||||| | || ||||| | | || |||||| || | ||||||| Sbjct 256436 GATGAAGGCCCCACGATCAGCAGCCATCTTGAGGATCATCCT----CTGGGGAATTTCCC 256491 Query 105759 ACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAAC 105818 | ||||| | ||| || ||||| || ||||||| | ||| || || || || | Sbjct 256492 AGACTGTTCTGTACAGTGCCTTGAGGTCTGCTGGGATGTTGTCGATGTTCTGGATCGAGC 256551 Query 105819 CC---CCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGA 105875 | | ||| | | | | | |||||| || | | ||| ||| || || ||| Sbjct 256552 CATTGCTCGCTATTATCTGG---TTCTTCATGTCGTCGTCCCAGAGATCACGCTCGGTGA 256608 Query 105876 GATCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGAT 105935 | || || | ||||| ||||| | || || || | || | ||| | Sbjct 256609 GGTCCTTCAGCAGATGGGGATTGACTACTTGGAATTCACCAGACAGTACACGCCTCGCGT 256668 Query 105936 AGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGG 105995 ||||||| | ||||| || |||| | || || ||||||| ||||| || || |||| Sbjct 256669 AGATGTTGCTGGTGTAAGGCTCAATGGCCTCGTTGTTACCCAGAATTTGGGCTGTTGAGG 256728 Query 105996 CTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTT--C 106053 |||||||||||||||||| | ||| ||| | || ||| | || | ||| || | Sbjct 256729 CTGTTGGCATTGGTGCCAGTAGGAGAGAGTTCCTAATACCGTGTT--TAGATATTTTATC 256786 Query 106054 CTTGAGAACATCCCAGTCGTAG----TTGAGCTTGGTTTCACCTTCCCACATATCAAATT 106109 |||||| || ||||||| || ||| ||||| | || ||||||| ||| | | Sbjct 256787 CTTGAGTTCAGCCCAGTCCCAGAGATTTG---TTGGTGTTACAC-CCCACATGTCATACT 256842 Query 106110 GAAGCACCCCTTGG--GACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC 106167 | || | || ||| ||| | ||| || | | ||||| |||| || | | | Sbjct 256843 GGAGGATGCCCTGGCTGACTGGTGAG--CCTTTGTACGTCTCGTAGGTGCCCTTCTCCTG 256900 Query 106168 AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 106227 || | || || ||||| |||| | | ||||| ||| || ||||| | ||| Sbjct 256901 GGCGAGCTCGCATGAGGCCTCGAGGGCACCATAATACAGGGTCTCGAAGATCTGGATATT 256960 Query 106228 CATCTCCTTGGCTTCAT--CTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCG 106285 | | || ||| |||| ||| || |||| || || || | |||| |||| || Sbjct 256961 GAGTTTCTGGGCCTCATTGCTG--TCGAATGGATAACGCATCAGTAGAAATGCATCTGCC 257018 Query 106286 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA 106345 ||||| ||||| || | || || || | |||| ||| || || || || ||| Sbjct 257019 AGACCCTGAACTCCAATTCCCATGGGACGATGTCTCATGTTGGAGACTCTTGCCTCCTCG 257078 Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 106405 | || ||| |||| || || |||| || |||||| | | || || || || | Sbjct 257079 ATTGGGTAATAATTGACATCGATAACTCTGTCGAGATTTCTTGCGACGATTTTGACGACT 257138 Query 106406 -TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTT-CATTG-----ACATACTTTGG 106458 || | | || || ||| || ||||| || || || || || | Sbjct 257139 GTCTTCAGCTTGTT-------AAAGTTGTAAGTCTTTTTCACTGGGTCCACGAACATGTT 257191 Query 106459 AAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAAT 106518 | || || || ||||||||||||||||| ||||| | |||||| | || Sbjct 257192 GACTGCAATCGAGGCCAAATTGCAAACAGCAACTTCATCGGGGCTCGAGTACTCGACGAT 257251 Query 106519 TTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTT 106578 || |||||||||||| | || ||||| ||||| ||||| || || ||| | || Sbjct 257252 CTCAGTACACAAGTTGCTGCATTTTATCGTTCCCAAGTTCTTCTGATTGGATTTTCTATT 257311 Query 106579 GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGC 106638 ||| || |||||||| ||||||||||| || || ||||| |||||| | |||||||| Sbjct 257312 GCATGCGTCCTTGTACAGCATGTAGGGAGTTCCAGTCTCGACTTGTGACATAAGAATTGC 257371 Query 106639 CTTCCACACATCGGCGGCTGGTACAATGGCG-TTGGCCCGTCCCTCCGCCTCGTACTTTG 106697 |||| | || ||| || || || ||| || |||| ||||||||| || Sbjct 257372 AGTCCAGAGCTCACGAGCTTTCAC-CTGACGCTTGAAACGGGCCTCTCCCTCGTACTGTG 257430 Query 106698 TGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGAC 106757 ||||||| || || ||||||||| | ||| | || ||||| | || || | Sbjct 257431 TGTAGAGCTTCTCGAATTCCTCACCCCAGGTGTCACATAGGCCTGGACATTCGTGGGGGC 257490 Query 106758 AGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACA 106817 | | ||| ||| | | || || ||| || |||||||| | || || ||||| | Sbjct 257491 ACATCAGACTCCACACATCGTCCGCCAGAACACGTTTCATGAATAAATCCGGGATCCAGA 257550 Query 106818 GGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCT-TGGTTGAGTCGTAACTCA 106876 | | |||| || || | ||| || || | ||| || || | | | || Sbjct 257551 GTGCGTAAAAAAGTTCACGTGCTCGATATTCCTCTTTTCCTGTGTTTTTCTTG-AGATCG 257609 Query 106877 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTT 106932 || | || | || || |||||||| ||||| ||||| | || | | ||| | | Sbjct 257610 AGAACATCGAATATGTCAGCGTGCCAGGGCTCGAGATAAATGGCAAATGCTCCAGGACGT 257669 Query 106933 TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 106992 | | ||| | |||| ||||| || |||||| || | || |||||||| || | Sbjct 257670 TTG-TTTCCACCCTGATCAACATAACGTGCTGTGTTATTGTAAACACGAAGCATGGGTAC 257728 Query 106993 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 107052 || |||| ||| |||||| || || ||| || | |||||||| | | || Sbjct 257729 AAGCCCATTGGATATACCATTGGTACCAGCAATTCGTGTCCCCTTGGCTCTGATACAGTG 257788 Query 107053 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 107112 | | || ||||| || ||||| | || ||| | |||||| | | || || | Sbjct 257789 TACATTCACTCCAATTCCACCAGCTGATTTGCTGATGAGTGCACACCTCTTGAGGGTGTC 257848 Query 107113 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 107172 ||||| || || || ||| || | | | | || || || ||||||||||| | Sbjct 257849 GTAGATGCCATTAATGCTGTCGTCAGTCATTGTCAGGAGAAAACAGCTGGACATCTGTTG 257908 Query 107173 TCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACA 107231 ||| || | || ||| |||||||||| ||||||| |||| || || | ||||| Sbjct 257909 TCTACCAGTGCAGGCTGAGAAAAGGGTTGGTGATGCGTGAGTGAA-GTATCTCTCGGACA 257967 Query 107232 TCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACAC 107291 | || ||||||||| | ||| || ||||| || |||| || || | ||||| | Sbjct 257968 GATAGTTGTATGTCTCAATGACCCTGTCGATGTCCTCTTCGTGTATTCCCACAGCCACTC 258027 Query 107292 GCATAAACATGT 107303 ||| | ||||| Sbjct 258028 TCATCAGCATGT 258039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589973115500080