Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq76 86.0 7e-12 >seq76 Length=671789 Score = 86.0 bits (94), Expect = 7e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 154875 ATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAG 154934 ||||| || |||||||| || |||| || || || | ||| | | | ||| | Sbjct 244676 ATGATAACGTACCCATCCACCAATGGCGTCTTCGAGGAGACAATTTTAGATGTCTGTGAT 244735 Query 154935 ATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTA 154994 || || ||||| ||| |||||||||||||| ||||| || ||| | || || ||||| Sbjct 244736 ATGGTACATGAGGCTGGGGGTCAGGTATATCTCGATGGGGCCAATATGAACGCTCAGGTG 244795 Query 154995 GGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACA 155054 || || | ||| | || || ||| || || | || || || | || || ||| Sbjct 244796 GGCCTTTGCAGACCTGGGGACTACGGTAGTGACGTCTCGCACCTGAATCTTCACAAGACA 244855 Query 155055 TTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 ||||| ||||| ||||| || || |||||||| | || || || || || Sbjct 244856 TTCTGCATTCCCCATGGGGGAGGGGGTCCTGGTATGGGGCCCATCGGCGT 244905 Score = 84.2 bits (92), Expect = 3e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 153892 AAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCA 153951 |||| |||||| | || || || || |||||||||| ||||| || |||||||| || | Sbjct 243604 AAGCGTACAGACTGGCCCTTCAAACACGAGAGCAGCACATCAGAAGGGACAAAGCTACGA 243663 Query 153952 GTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATC 154011 |||||||||| || || || || | | || || |||||| | | ||||||| || | Sbjct 243664 GTAACATCTGTACGGCCCAAGCGTTATTAGCAAACATGTCTACAATGTATGCAGTCTACC 243723 Query 154012 ATGG 154015 |||| Sbjct 243724 ATGG 243727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579205255753280