Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq47 98.7 1e-15 >seq47 Length=978588 Score = 98.7 bits (108), Expect = 1e-15 Identities = 88/108 (81%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930 |||||||||| |||||||||||| || ||| |||| ||||| ||||| |||||||||| Sbjct 564591 CATAACTCCCCATTTTTGATATTCGCCGACTT-TCTTCTCGAAGAAATTAGTCTTTCCTT 564533 Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA 36978 |||| || || | ||||||||| || |||||||| || ||||||| Sbjct 564532 CTAGCGAAATTTGTTCCATAAAGTCGAATGGATTTTCTGAGTTATATA 564485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592309085073680