Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq127 129 8e-25 >seq127 Length=288532 Score = 129 bits (142), Expect = 8e-25 Identities = 528/816 (65%), Gaps = 20/816 (2%) Strand=Plus/Minus Query 197023 AGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTC--GTACATCTGGTTGT 197080 ||||| || || || || || || || || || || | || || |||| || || | Sbjct 34713 AGATCTTCCTCACTGAATCCAGTGCCAATTTTGCAGA--GACTCTGGTACTCCTCATTAT 34656 Query 197081 CGGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGT 197140 | |||| |||||| || | ||| || | |||||||| || || ||||| ||| ||| Sbjct 34655 CAGGATCGTAACAAGCCAATAAAAATCCACCGTAGGTACCGGTCCTCTTACCCCTCCCCA 34596 Query 197141 TGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCT 197200 | | || || || || || | ||| ||||| || | |||||||| | ||||| || | Sbjct 34595 AGTATCCCCCAATGACAACGACATCGAGAGTATCTCCAACCCCTTCTAAATAATCCTTTT 34536 Query 197201 TCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGG 197260 | || || | ||| |||| ||||||||||||||||| ||||| || | | || |||| Sbjct 34535 TGAGCTTTAACCAATTTCTCGATCTCTTGGCAATCTCATAGGTGGCATCCTCCTCGAGGG 34476 Query 197261 TCTTGATCATCAATCCCTCGCAATCTTCCTTCACGGCCTTGTTCATGAAAGT-TTGAATG 197319 |||| | ||| | |||||||| | |||| || | | | || |||| | || | Sbjct 34475 TCTTCACCATGAGGCCCTCGCAGTTGCCCTTGACAGAC-TCCTCGAGAAATTCCTGGACC 34417 Query 197320 TCTTCCGGTTTGTTAGACATCATATCTCG-CGCGAAGATAAATTGTCCCTCCACCTCCGT 197378 || || |||| | | || |||| ||||| | | | ||||| | || ||| Sbjct 34416 TCCTCGATTTTGGTCG-TGTCGAGGCTCGTGGCGAATCTCCACTCACCCTCGAGCT-CGT 34359 Query 197379 AAAACAACTCC-TCATAAGTTCCCTCCTCTCTCTGAAGCTCTTGTTGACCTGAGACACTC 197437 || |||| ||| || || | ||| | || | | | ||| | | | | | Sbjct 34358 TGAAGTGCTCCTTCAGGAGCTCTCGCCTTTTAACAAATGGATGGGTAACCAGGGCCTCGC 34299 Query 197438 CGTTCATGTACAACACGTCAAAAGCAAAGACGCACACCTGGACGGTTATCTCTTCTTCCT 197497 | |||| || | | ||||| || || ||||||||||| | || || | || | Sbjct 34298 CATTCAGATATAGAAGATCAAACATGAATACACACACCTGGACCTTGATATCCGCCTCGT 34239 Query 197498 TGACATCTTTACGTTTTCTGGTCGCCAGCTTTTGAAAGGGAAGGATCTGCTTCTTCTCAA 197557 || |||| || | ||||| || || | ||||||||||| |||||||| ||||| Sbjct 34238 TGGCATCCTTTCTCTTTCTCGTACTTAGGATCTGAAAGGGAAGTATCTGCTTTTTCTCCC 34179 Query 197558 CGTCCCAAGCAACTGCCTCAGCGTCCAAGATGAAAGACTTCACTCCCTCGTTGA---TCG 197614 |||||| ||||||||||| |||| ||| | ||||||| | || | | Sbjct 34178 TGTCCCAGGCAACTGCCTCGCAATCCAGAATGCAGCTCTTCACTGATTTTTTCACAGCTG 34119 Query 197615 ATTGGGGAAGCCTATTGATTATGTCGGGGTACTTCTCGGTGTTATTTTCAGAGTTGCGGC 197674 ||| | |||||| ||||| || || ||||| |||||| || || ||| | | Sbjct 34118 ATTTG---AGCCTACCTATTATATCAGGATACTTGCTGGTGTTGTTCTCCTGGTTTC-TC 34063 Query 197675 TAAAAATTCTAATCTTC-CCTCCCTCCATGTAGTGAATCTGAGCCCTCTCTCCGTCATAC 197733 || || || | | | || | ||| ||| ||||| || | |||||| || || Sbjct 34062 GAATAAATCGACACGACACCACTCTCGTCCACGTGTATCTGTGCACGCTCTCCATCGTAT 34003 Query 197734 TTGTACTCGCAAG-AAAAGACAGCTCCTTTCAGCTTGCTCATCACGTCTTCGATTCCCGT 197792 || ||||||| | ||| || ||| | | || | | ||| || | | ||| | Sbjct 34002 TTCCACTCGCACGTAAATTTGTGCCCCTCGAATC-TGGTGAGCACCTCCTGCACACCCTT 33944 Query 197793 GGTAGGAGTGGCGAGCATAGGTTTCATGGGAATTCC 197828 |||||| || ||||| ||||||| ||||||||| Sbjct 33943 CGTAGGATGTGCCAGCATGGGTTTCAGGGGAATTCC 33908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676720785596960