Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq109 172 7e-38 seq113 134 2e-26 >seq109 Length=386716 Score = 172 bits (190), Expect = 7e-38 Identities = 1143/1810 (63%), Gaps = 45/1810 (2%) Strand=Plus/Plus Query 75145 TTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCAT 75204 ||||||||| |||| |||||||||| ||| || || | || || |||||| || | Sbjct 264708 TTACTTTGGCTTCAAGACCCTTGAGAGGAGTTACCTGCTGAGGATCAATGGCAAAGTCGT 264767 Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264 || | || ||||| | ||| | || || | || || |||| ||| || || | Sbjct 264768 TGAGAGGCCTGCCCACATGCTGATGAGAGTGGCTGTGGGAATACACGAGGAGGATATCGC 264827 Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAA 75323 ||| | ||||||||| || | ||||| | || || |||| ||||||| |||||| Sbjct 264828 CAGGGTCATTGAGACATACAACTATCTGTCCGAGAGATAC-TTCACTCACGCATCACCAA 264886 Query 75324 CCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACA 75383 |||||||| || | || | || ||||||||||| || |||||| | | | | Sbjct 264887 CCCTCTTCTCAGCCTGCACTTGTATACAACAGATGTCCAGCTGTTTCCTTCTAACAATGA 264946 Query 75384 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGT 75443 |||||| ||| | || ||||| | || || | | |||||| | || |||| Sbjct 264947 CTGAGGACAGCATCGATGGCATCTACGACACCCTCAAGAGGTGTGCACTTGTCAGCAAGT 265006 Query 75444 GGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGG 75503 ||||| |||||||| || | | || | | |||||||| | || ||| | Sbjct 265007 CAGCTGGTGGTATTGGAGTGAATGTTCACTGTATCAGAGCCAAGGGGACACGAATTGCTG 265066 Query 75504 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 75563 | || |||||| ||| |||| || | || |||||||| || | || |||||| | Sbjct 265067 GTACCAATGGTGTATCCAATGGGCTTGTACCCATGCTTCGTGTTTACAATAACACAGCAC 265126 Query 75564 GCTATGTAAATCAAGCGGGGCGTCGCAAG----GGGTCCATCGCGGTCTACTTGGAACCA 75619 | || || ||| || | || | | | || | | || | || | || || Sbjct 265127 GTTACGTTGATC-AGGGTGGAAACAAACGTCCTGGCGCATTTGCCATTTATCTCGAGCCC 265185 Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGA-GTTACGACTCAACCAAGGTGACGAAGAGGC 75678 ||||| || || ||| | || | || || | | || ||| ||| | || || Sbjct 265186 TGGCACGCTGACATCTTTGATGTTCTCGATCTCAAGA-AGAACACAGGAAAGGAGGAATA 265244 Query 75679 TCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738 | | | || || || | | || |||||||| || || |||||||| || || Sbjct 265245 TAGAGCGCGTGAGCTGTTCTACGCACTCTGGATTCCTGATCTATTCATGAAACGAGTCCT 265304 Query 75739 GGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGT 75798 || || |||| ||| ||| | || || || || ||||| || | ||| | Sbjct 265305 GGCGGATGGTATGTGGAGTCTGATGTGCCCCCACGAGTGTCCAGGCCTTTGTGACTCTTG 265364 Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGAC 75858 |||||| |||||||| |||||| ||| || || | |||| | | ||| ||| | Sbjct 265365 GGGTGAAGAGTTTGAGAATCTCTACGTAAAATACGAGAACGAGGCTCGTTTCAA-GCGTC 265423 Query 75859 TGTACCAGCCGC-CGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917 | || | | ||| | |||| || ||||| | ||||| |||||||| || | Sbjct 265424 AGGTGAAGGCTCGTGATCTCTGGACTGCAATTCTTATGTCACAAGTCGAGACTGGGACCC 265483 Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977 | || ||||| ||||| || || || ||| ||| || || ||||| |||||||| | Sbjct 265484 CCTACATGCTGTACAAAGACGCATGCAACCGGAAATCCAATCAGAAGAACTTGGGAACGA 265543 Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037 | || || || | ||||| || || | |||||| | ||||| | |||| Sbjct 265544 TAAAATGCAGCAACTTGTGCACTGAGATCGTGGAGTACTCGAGCCCCGATGAAATTGCTG 265603 Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTG 76097 ||||||||||||| || || || || | || || || || || |||| | Sbjct 265604 TTTGCAATTTGGCCTCGATTGCAGTTAACATGTTCGTGGATCCAGTGAAAAAAACTTACG 265663 Query 76098 ATTATGAAAAACTTCATGAAATC-ACAAAGATTGTTACCAAAAATCTAAACCGAGTCATT 76156 | | | | || || | | || ||||| ||||||||| ||| || || |||| || Sbjct 265664 ACTTTAAGAAGCTGAAGACAGTCGTCAAAG-TTGTTACCAGAAACCTCGACAGAGTGATC 265722 Query 76157 GACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCT--AATATGCGACACAGACCTA 76214 ||| ||| ||| || ||||| | | || ||||||| || || ||||| | || | Sbjct 265723 GACGTCAATCATTACCCACTTGAG-CAG-GCAAAAGTCTCCAACGTGAGACACCGTCCCA 265780 Query 76215 TTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATT 76274 | || | || ||||| ||||| || |||| |||| | || || || |||| || Sbjct 265781 TGGGAATTGGAGTTCAGGGTCTGGCAGATGCATTTCTACTGATGCGTTATCCATTCGACA 265840 Query 76275 CAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGG 76334 ||||| ||| || | | ||| | ||||| || ||| ||||| ||| | || | Sbjct 265841 GCGATGACGCCCAGAAACTCAATATCCAGATCTTCGAGACCCTGTATTACGGTGCACTCG 265900 Query 76335 AGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCG 76394 |||| || || | || | | | || |||| ||||| | | || || || | Sbjct 265901 AGGCCTCATGCGAGCTCGCCCAGGAGAAGGGCACCTACGAGACGTACAAAGGCTCACCAG 265960 Query 76395 CGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAA----CTAC 76450 ||| || | || |||| || ||||||| || | ||||| ||| || Sbjct 265961 TCAGCCAGGGCATCCTCCAGTACGACATGTGGG-GTGTAACACCAA---CAAATCTCTGG 266016 Query 76451 GACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 76510 ||||||| | |||||||| || | | ||| | | ||| ||| | || Sbjct 266017 GACTGGGCTAAACTCAAGGATAAAATTTCCAAACACGGTATCAGGAACTCTCTCCTACTG 266076 Query 76511 GCACCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATGCTTTGAACC 76569 |||||||||||||||||||| || || |||| ||||||| || || || | | || || Sbjct 266077 GCACCAATGCCAACAGCCTCAACAGCCCAAATTCTTGGG-AACAACGAGGCCATCGAGCC 266135 Query 76570 ATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAA 76629 ||||| | || |||||| |||| | | | ||||| || | ||||| Sbjct 266136 CTACACCAGCAATATCTACTCGAGACGTGTATTGTCTGGTGAATTCCAGGTGGTCAATCC 266195 Query 76630 GCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCAT 76689 || ||| | || ||||||| || |||||| | | || ||| |||| | | Sbjct 266196 CCATCTCCTGAAGGACCTCACCGAGCGCAACCTCTGGGACGACGAGATG-AGGA--ACCT 266252 Query 76690 GGTGAAAGCG---GGTGGTTCCATTCAAAATATC-TCAGATATCCCAGATGATATCAAGA 76745 | | | |||| ||| || || || || ||| ||| ||||||| || |||||| Sbjct 266253 GATAATAGCGAACAATGGCTCGATCCAGAACATCGACAG-CATCCCAGCAGACATCAAGG 266311 Query 76746 ATCTCTACCGCACAGTGTGGGAAAT---CAAGATGAAAGATGTCATTGACATGGCCGCAG 76802 || ||| | ||||| ||||| || | ||| | | || || | | ||||| || | Sbjct 266312 CACTGTACAGAACAGTCTGGGAGATTCCCCAGA-GGATGA--TCCTCAAGATGGCAGCTG 266368 Query 76803 ATCGTGGTCGCTTCATTGATCAAAGTCAAAG--TATGAATCTATTCATGGAAAGTCCAAC 76860 ||||||| |||||| |||| |||| || | | ||| | ||| | || |||||| Sbjct 266369 ATCGTGGGGCCTTCATCGATC--AGTCCCAGTCTCTCAATGTTCACATAGCAAATCCAAC 266426 Query 76861 GATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAAT 76920 | || ||| | || |||||| | | || ||| | || | || || ||||| Sbjct 266427 AACTGAAAAACTCACCTCCATGCATTTCTTCGGTTGGGAGGCTGGCTTGAAGACTGGAAT 266486 Query 76921 GTACTATCTC 76930 |||||| ||| Sbjct 266487 GTACTACCTC 266496 >seq113 Length=346302 Score = 134 bits (148), Expect = 2e-26 Identities = 1098/1754 (63%), Gaps = 65/1754 (4%) Strand=Plus/Minus Query 75219 ACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGA 75278 ||||| | ||| | || || | || || |||| || ||||| || ||| | |||| Sbjct 258039 ACATGCTGATGAGAGTGGCTGTGGGAATACACGAAGAGGACATCGACAGGGTCATTGAGA 257980 Query 75279 CATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCT 75337 ||||| || | ||||| | || || |||| ||||||| |||||||||| ||| || Sbjct 257979 CATACAACTATCTGTCCGAGAGATAC-TTCACTCACGCATCACCAACCCTTTTCTCAGCC 257921 Query 75338 GGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 75397 | || |||| ||||||||||| || || || | | | | || ||| || Sbjct 257920 TGCACTGGTAGACAACAGATGTCCAGCTGTTTTCTCCTGACAATGACTGACGACAGCATT 257861 Query 75398 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 75457 || || ||||| | || || | | |||||| | ||| || | ||||| || ||| Sbjct 257860 AATGGCATCTACGACACCCTCAAGAGGTGTGCACTCATCAGCAAATCAGCTGGTGGAATT 257801 Query 75458 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 75517 || || | | || | | |||||||| | || ||| || || |||||| | Sbjct 257800 GGAGTGAATGTACACTGTATCAGAGCCAAGGGGACACGAATTGCTGGTACCAATGGTATA 257741 Query 75518 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 75577 || |||| || | || |||||||| || | || |||||| || ||||| |||| Sbjct 257740 TCCAATGGGCTTGTACCCATGCTTCGTGTTTACAATAACACAGCACGTTATGTTGATCAG 257681 Query 75578 GCGGGGCGTCGCAAGG---GGTCCATC-GCGGTCTACTTGGAACCATGGCATGCCGATAT 75633 | | || | | | || ||| || | || | || || ||||| || || || Sbjct 257680 G-GTGGAAACAAACGTCCTGGAGCATTTGCCATTTATCTCGAGCCCTGGCACGCTGACAT 257622 Query 75634 CATGGAGTTCCTTGAGTTACGACTCAACCA-AGGTGACGAAGAGGCTCGGTGTAGAGATC 75692 | || | || || | | | || || ||| | || || ||| | || | Sbjct 257621 ATTCGATGTTCTCGATCT-CAAGAAAAACACAGGAAAAGAGGAATATCGAGCACGTGAAC 257563 Query 75693 TCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAAT 75752 | |||| | || ||||| || || | |||||||| || ||| || || | | | Sbjct 257562 TTTTTTACGCACTCTGGATCCCGGATTTATTCATGAAACGTGTTCTGGCGGACGATGTGT 257503 Query 75753 GGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTG 75812 || ||| | || || || | ||||| || | ||| | ||||||||| || | Sbjct 257502 GGAGTCTGATGTGCCCCCACGAATGTCCAGGCCTATGTGACACCTGGGGTGAGGAATTCG 257443 Query 75813 AAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTG-TACCAGCCGCC 75871 | ||||||||| |||| || | |||| | ||| ||| | | | ||| Sbjct 257442 AGAAGCTCTACACACAGTACGAGGGAGAGGCCCGTTTCAA-GCGTCAGGTGAAAGCTCGT 257384 Query 75872 GATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTAC 75931 || | |||| || ||||| | ||||| ||||||||||| || || ||||| ||| Sbjct 257383 GAGCTCTGGACTGCAATTCTTATGTCACAAGTCGAGACTGGAACTCCCTACATGCTGTAC 257324 Query 75932 AAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAAT 75991 ||||| || || || | || || || ||||| |||||||| || || || || Sbjct 257323 AAGGACGCATGCAATAGAAAATCCAATCAGAAGAACTTGGGAACGATAAAATGCAGCAAC 257264 Query 75992 CTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCA 76051 | || || || || | |||||| | ||||| ||||||||||||||||| Sbjct 257263 TTGTGTACTGAGATCGTCGAGTACTCGAGCCCCGATGAAGTTGCTGTTTGCAATTTGGCC 257204 Query 76052 TCAATCGCCCTTCCAAAGTATGT-----CAATGAAGA-GACTCGCACTTTTGATTATGAA 76105 || || || | | || || || |||| | |||| || ||| || Sbjct 257203 TCGATTGCAGTCAACATGTTCGTGGACCCAGTGAAAAAGACTTACAACTTT-------AA 257151 Query 76106 AAACTTCATGAAA-TCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAA 76164 || | | || | || || || || | | |||||| || |||| || || || Sbjct 257150 CAAGCTGAAGACAGTCGTCAAAATCGTCGCAAGAAATCTCGACAGAGTTATCGATGTCAA 257091 Query 76165 TTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGG 76224 || ||| || | ||| || || || || ||| |||| | || || || | || Sbjct 257090 TTATTACCCAATCGAGGAGGCAAGAGTCTCCAACATGAGACATCGTCCCATGGGAATTGG 257031 Query 76225 TGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAG--ATGAA 76282 ||||| ||||| || |||| |||| | || || || |||| || ||| |||| Sbjct 257030 AGTTCAGGGTCTGGCAGATGCATTTCTACTGATGCGTTATCCATTCGA--CAGCAATGAG 256973 Query 76283 GCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGT 76342 ||| || | | ||| | ||||| || ||| ||||| | | |||| ||||| Sbjct 256972 GCCCAGAAACTCAATATCCAGATCTTCGAGACCCTGTATTATGGTGCCCTCGAGGCCTCA 256913 Query 76343 TGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAA 76402 || || | || | | | || |||| ||||| | | || || || | ||| Sbjct 256912 TGCGAGCTCGCCCAGGAGAAGGGCACCTACGAGACGTACAAAGGCTCACCAGTCAGCCAG 256853 Query 76403 GGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAA----CTACGACTGGGA 76458 || | || |||| ||| ||||||| | | | ||||| ||| || ||||||| Sbjct 256852 GGCATCCTCCAGTATGACATGTGGGGTG-TAACACCAA---CAAATCTCTGGGACTGGGC 256797 Query 76459 TGTTCTCAAGGA--ACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCA 76516 || |||||||| | ||| | | | ||| || | ||| ||| | |||||||| Sbjct 256796 TGAACTCAAGGATAAAATATCTA--AACACGGTATTAGGAACTCTCTCCTACTGGCACCA 256739 Query 76517 ATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACA 76576 |||||||||||||| || || ||||| ||||||| || || | |||| || ||||| Sbjct 256738 ATGCCAACAGCCTCAACAGCCCAAATTCTGGGTAACAACGAGGCCATTGAGCCTTACACC 256679 Query 76577 ACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTC 76636 | ||||||||| ||| | || | ||||| || | ||||| || || Sbjct 256678 AGCAACATCTACGCGAGGCGTGTACTGTCTGGTGAATTCCAAGTAGTCAATCCCCATCTG 256619 Query 76637 GTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAA 76696 | || ||||||| || || ||||||| | | || |||||| | | | | | | Sbjct 256618 CTGAAGGACCTCACCGAGCGTGATCTCTGGGACGACGACATGAAGAA---CCAGATAATA 256562 Query 76697 GCGGG---TGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTAC 76753 ||| | ||| || || || || ||| | ||||||| || ||||| || ||| Sbjct 256561 GCGAGCAATGGCTCGATCCAGAACATCGACAACATCCCAGCAGACCTCAAGGCACTGTAC 256502 Query 76754 CGCACAGTGTGGGAAAT---CAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGT 76810 | ||||| |||||||| | ||| | | || || | | ||||| || |||||||| Sbjct 256501 AGAACAGTCTGGGAAATTCCCCAGA-GGATGA--TCCTCAAGATGGCTGCTGATCGTGGG 256445 Query 76811 CGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCC- 76867 |||||| || | |||| ||| | ||| | |||| || |||||| ||| Sbjct 256444 GCCTTCATCGACC--AGTCCCAGTCCACCAATGTTCATATGGCAAATCCAAC----TCCC 256391 Query 76868 ---AAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTAC 76924 |||||| | || |||||| | | || ||| | || || || || ||||||||| Sbjct 256390 GAGAAGCTCACATCCATGCATTTCTTCGGATGGGAGTCTGGCCTGAAGACTGGAATGTAC 256331 Query 76925 TATCTCCGATCAAA 76938 || ||| || |||| Sbjct 256330 TACCTCAGAACAAA 256317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596561829680960