Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq37 134 2e-26 >seq37 Length=1171872 Score = 134 bits (148), Expect = 2e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 193170 TCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAA 193229 ||||| |||||| || ||||| | ||||| ||| || |||||||| |||||||| Sbjct 189082 TCTTTTTGAATATTGTAATCGGAAAGAGTTCTTCCATCCTCCAATTGTTTACCGGCAAAG 189023 Query 193230 ATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTT 193289 || || | ||||||||| || || || |||||||||||||| || || | ||| | |||| Sbjct 189022 ATCAAACGCTGTTGATCTGGTGGGATACCTTCTTTATCTTGAATCTTAGCTTTAACATTT 188963 Query 193290 AAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACA 193349 || || || || | |||||| || || || || ||||| || || || || ||||| Sbjct 188962 TCGATGGTGTCAGATGCCTCAACCTCCAGTGTAATGGTTTTGCCAGTCAGAGTCTTTACG 188903 Query 193350 AATATTTGCATT 193361 |||||||||||| Sbjct 188902 AATATTTGCATT 188891 Score = 114 bits (126), Expect = 2e-20 Identities = 167/236 (71%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193126 TTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTAT 193185 |||| | |||||||| | ||||| |||| || | || | ||||| ||| || | Sbjct 189582 TTTAGAATCCACCTCTGAGACGAAGAACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGT 189523 Query 193186 AGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGAT 193245 |||| || | ||||| ||| || | |||||| || || || || || | || |||| Sbjct 189522 AGTCTGAGAGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAGATCAAACGTTGCTGAT 189463 Query 193246 CAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAG 193305 ||||||| || || || ||||| || || |||| || | |||| ||||||||| || | Sbjct 189462 CAGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACATTTTCAATAGTATCAGAGG 189403 Query 193306 ACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||| ||||| || || || || || || || || || || ||||| || |||||| Sbjct 189402 CCTCTACTTCAAGTGTGATGGTCTTTCCAGTCAGAGTCTTGACAAAAATCTGCATT 189347 Score = 102 bits (112), Expect = 1e-16 Identities = 133/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 |||||| || || || | ||||| ||| || |||||||| || || || || | | Sbjct 188846 AATATTGTAATCTGAAAGAGTTCTTCCATCCTCCAATTGTTTACCAGCGAAGATAAGACG 188787 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 || || || ||||| ||||| ||||| || || || |||| || | |||| ||| || Sbjct 188786 TTGCTGGTCTGGAGGAATTCCCTCTTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGT 188727 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 || |||| ||| || || || || || ||||| || || || || ||||| |||||||| Sbjct 188726 GTCAGAAGCCTCGACCTCCAGGGTGATGGTTTTGCCAGTCAGAGTCTTTACGAATATTTG 188667 Query 193358 CATT 193361 |||| Sbjct 188666 CATT 188663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899642682001440