Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq14 114 2e-19 >seq14 Length=1632344 Score = 114 bits (126), Expect = 2e-19 Identities = 114/148 (77%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 1592153 GTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCT 1592212 || || ||| ||| ||||| ||| |||||||| ||||||| ||||| ||||||||| | Sbjct 1139443 GTTGATCAGGGCACACTCTTCGAGCTGATCCTCTCCGCCAATTACCTGGACATCAAGGGT 1139502 Query 1592213 CTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAG 1592272 || | ||| | |||||| | || |||||||||||||| || || | || ||||| Sbjct 1139503 CTCTTGGATGTAACCTGCAAGACAGTAGCCAACATGATCAAAGGTAAAACCCCAGAGGAA 1139562 Query 1592273 ATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||| || ||||| ||| ||| Sbjct 1139563 ATCCGCAAGACTTTCAACATTAAGAACG 1139590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107053688600314