Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq12 89.7 5e-13 >seq12 Length=1757667 Score = 89.7 bits (98), Expect = 5e-13 Identities = 144/203 (71%), Gaps = 3/203 (1%) Strand=Plus/Plus Query 146378 AAGGTGGCGCAATTAAGTGGGTGTGTGGCAGAGCAGACCGATTACAAGCACGGGGAG-CA 146436 ||||| || ||||| ||| | ||| || || || | | || | ||||| ||| || Sbjct 338540 AAGGTCGCCCAATTGGCTGGTTCTGTCGCTGAACATTCAGCCTATCATCACGGTGAGGCA 338599 Query 146437 AAACTTGTGCGAGACCATCATTAAGTTCGCGCAGGATTTTGTGGGCAGCAATAATATCCC 146496 ||| || | ||||| ||||| || || ||| |||| || |||||||||||||| Sbjct 338600 TCACTCATG-GCTACCATTATTAATTTAGCCCAGAATTTCGTTGGCAGCAATAATATAAA 338658 Query 146497 CCTTCTC-TACCAGATGGGCAATTCGGAACAAGGTTGGAAGGAGGGAAGGACGCTGCAAG 146555 ||||| | || |||| || ||||| || || | || || |||||| | ||||| Sbjct 338659 TCTTCTGATGCCCAATGGTCAGTTCGGTACGAGAGCCCAGGGTGGAAAGGACTCGGCAAG 338718 Query 146556 TCCCAGATATATTTTCACCAAAC 146578 |||||||||||| ||||| |||| Sbjct 338719 TCCCAGATATATATTCACTAAAC 338741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521538806868560