Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq109 187 2e-42 seq113 136 4e-27 seq37 98.7 9e-16 seq7 82.4 7e-11 >seq109 Length=386716 Score = 187 bits (206), Expect = 2e-42 Identities = 818/1271 (64%), Gaps = 45/1271 (4%) Strand=Plus/Minus Query 146749 ATTTCCCAAGCGGTTTTGTACAGCCCCTTAACGCTATCTGGAATACCTTCAATGTTTTGA 146808 || ||||| | ||| ||||||| |||| | | |||| || | || ||||| || Sbjct 266336 ATCTCCCAGACTGTTCTGTACAGTGCCTTGATGTCTGCTGGGATGCTGTCGATGTTCTGG 266277 Query 146809 ATAGAGCCCTTGTGCGCAAAAATAGTGTTTCGTATTTCGGGCGTGTAA-AGGTTTAGTTT 146867 || ||||| |||| ||| | || ||| | || ||| ||| | ||||| | | Sbjct 266276 ATCGAGCCATTGTTCGCTATTATCAGGTTCCTCATCTCGT-CGTCCCAGAGGTTGCGCTC 266218 Query 146868 AATGAGGTCATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCT 146927 ||||||| | | | || |||||||||| || || || || | || |||||||| Sbjct 266217 GGTGAGGTCCTTCAGGAGATGGGGATTGACCACCTGGAATTCACCAGACAATACACGTCT 266158 Query 146928 -GAGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCG 146986 ||| || | |||||| ||| | ||||| | | ||| || || || | |||||||| | Sbjct 266157 CGAG-TAGATATTGCTGGTGTAGGGCTCGATGGCCTCGTTGTTCCCAAGAATTTGGGCTG 266099 Query 146987 TGGTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGGA--T 147044 | | || || ||||| |||| | | || || | | ||||| | ||| | Sbjct 266098 TTGAGGCTGTTGGCATTGGTGCCAGTAGGAGAGAGTTCCTGATACCGT--GTTTGGAAAT 266041 Query 147045 GTTGTCCTTCAAAGTTTG--CCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCG 147102 || ||||| | |||| ||||||||| | | || || || |||||||||| Sbjct 266040 TTTATCCTTGA--GTTTAGCCCAGTCCCAGAGATTTGTTGGTGTTACACCCCACATGTCG 265983 Query 147103 TACTGGAGCACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGC 147162 |||||||| | || | ||| | || ||| | |||| |||| | || | | Sbjct 265982 TACTGGAGGATGCCCTGGCTGACTGGTGAGCCTTTGTACGTCTCGTAGGTGCCCTTCTCC 265923 Query 147163 TGCGCCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTG 147222 || || | || || |||||||| || || || || | ||| ||| ||| || | Sbjct 265922 TGGGCGAGCTCGCATGAGGCCTCGAGTGCACCGTAATACAGGGTCTCGAAGATCTGGATA 265863 Query 147223 TTTAGGACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCC 147282 || || || || ||||| ||| | || ||||| || | ||| ||||| ||| Sbjct 265862 TTGAGTTTCTGGGCGTCATCGCTGTCGAATGGATAACGCATCAGTAGAAATGCATCTGCC 265803 Query 147283 AAACCCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT 147342 | |||||| | || | || || || || || | ||||| | || || | | Sbjct 265802 AGACCCTGAACTCCAATTCCCATGGGACGGTGTCTCACGTTGGAGACTTTTGCCTGCTCA 265743 Query 147343 ATGGGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATT 147402 | || || || ||| || || | ||| |||||| | |||||||| | | Sbjct 265742 AGTGGGTAATGATTGACGTCGATCACTCTGTCGAGGTTTCTGGTAACAACTTTGACGACT 265683 Query 147403 GTTTTGAGTTTCTCGAAATCATAAGTCCCGTCTTC----GA--CACGTACGCATTGGTTC 147456 || || || |||| || || ||||| | ||| || |||| || || ||| Sbjct 265682 GTCTTCAGCTTCTTAAAGTCGTAAGTTT--TTTTCACTGGATCCACGAAC--AT--GTTA 265629 Query 147457 ACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCG-TCGCTGTACTGCACGAT 147515 || || || || |||| |||||| || || | || |||| | ||| ||||| |||||| Sbjct 265628 ACTGCAATCGAGGCCAAATTGCAAACAGCAATTTCATCGGGGCTCGA-GTACTCCACGAT 265570 Query 147516 TTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATT 147575 || | ||||| ||||||||||||||| |||||| || | ||||||| |||||| || Sbjct 265569 CTCAGTGCACAAGTTGCTGCATTTTATCGTTCCCAAGTTCTTCTGATTGGATTTCCGGTT 265510 Query 147576 GCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAA 147635 ||| ||||||||| | |||||||| || || ||||||||||| | || |||| Sbjct 265509 GCATGCGTCTTTGTACAGCATGTAGGGGGTCCCAGTCTCGACTTGTG-----AC-ATAAG 265456 Query 147636 CCTATGCAGGTCCTGCGCTCGC-ACCC----GCTGCCGAT---AGCGGCCCTCGTTTTCG 147687 | |||| |||| | | || | | || ||| || | | || ||||||| ||| Sbjct 265455 AAT-TGCA-GTCCAGAGATCACGAGCCTTCACCTGACGCTTGAAACGAGCCTCGTTCTCG 265398 Query 147688 TACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGA 147747 || |||| | ||||||||| || || | | || |||||| ||||||| Sbjct 265397 TATTTTACGTAGAGATTCTCAAACTCTTCACCCCAAGAGTCACAAAGGCCTGGACACTCG 265338 Query 147748 TGCGGACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGC 147807 || || |||||||| |||||| | ||||| || ||| ||| || ||||| || Sbjct 265337 TGGGGGCACATCAGACTCCACATACCATCCGCCAGGACTCGTTTCATGAATAGATCAGGA 265278 Query 147808 ACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTC 147867 | ||| || ||||| | || || |||||| | | ||||| || |||| || Sbjct 265277 ATCCAGAGTGCGTAGAACAGCTCACGCGCTCTATATTCCTCCTTTCCTGTGTTCTTCTTG 265218 Query 147868 AAATTAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCT 147927 | || || || | ||||||| ||||||||||| || | || | ||| | || || Sbjct 265217 AGATCGAGAACATCAAAGATGTCAGCGTGCCAGGGCTCGAGATAAATGGCAAATGCGCCA 265158 Query 147928 TTACG---CTTTCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATG 147984 ||| ||||| ||||| || || | || | |||| || | || || | |||| Sbjct 265157 GGACGTTTGTTTCCACCCTGATCAACGTAACGTGCTGTGTTATTGTAAACACGAAGCATG 265098 Query 147985 GGTTCCAGGCC 147995 ||| | || || Sbjct 265097 GGTACAAGCCC 265087 >seq113 Length=346302 Score = 136 bits (150), Expect = 4e-27 Identities = 954/1516 (63%), Gaps = 49/1516 (3%) Strand=Plus/Plus Query 146891 GATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAG 146950 ||||||| ||||| || || || | ||| ||||| || || | ||||| ||| ||| Sbjct 256627 GATTGACTACTTGGAATTCACCAGACAGTACACGCCTCGCGTAGATGTTGCTGGTGTAAG 256686 Query 146951 GCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCA 147010 |||||| | ||| || || || | |||||||| || | || || ||||| |||| Sbjct 256687 GCTCAATGGCCTCGTTGTTACCCAGAATTTGGGCTGTTGAGGCTGTTGGCATTGGTGCCA 256746 Query 147011 CCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTG--CCAGTC 147068 | | || || | | ||||| | || || ||||| | ||| |||||| Sbjct 256747 GTAGGAGAGAGTTCCTAATACCGTGTTTAGATATTTTATCCTTGA--GTTCAGCCCAGTC 256804 Query 147069 CCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGG 147128 ||| | | || || || ||||||||| |||||||| | || | ||| | || Sbjct 256805 CCAGAGATTTGTTGGTGTTACACCCCACATGTCATACTGGAGGATGCCCTGGCTGACTGG 256864 Query 147129 ACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAG 147188 ||| | |||| |||| | || | ||| || | || || |||||||| Sbjct 256865 TGAGCCTTTGTACGTCTCGTAGGTGCCCTTCTCCTGGGCGAGCTCGCATGAGGCCTCGAG 256924 Query 147189 CGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTC 147248 || ||||| || | ||| ||| ||| || | || || || || | ||| || Sbjct 256925 GGCACCATAATACAGGGTCTCGAAGATCTGGATATTGAGTTTCTGGGCCTCATTGCTGTC 256984 Query 147249 GTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGG 147308 | | || ||||| || | ||| ||||| |||| |||||| | || | || || || Sbjct 256985 GAATGGATAACGCATCAGTAGAAATGCATCTGCCAGACCCTGAACTCCAATTCCCATGGG 257044 Query 147309 TCGATGCTTTTCGTTGCTG-CGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAA 147367 ||||| | |||| | | ||| | | | | || || || | ||| ||| |||| Sbjct 257045 ACGATGTCTCATGTTGGAGACTCTTGCCTC-CTCGATTGGGTAATAATTGACATCGATAA 257103 Query 147368 TCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAG 147427 ||| ||| || | | || | ||| | ||| || || || | || | |||| Sbjct 257104 CTCTGTCGAGATTTCTTGCGACGATTTTGACGACTGTCTTCAGCTTGTTAAAGTTGTAAG 257163 Query 147428 TCCCGTCTTCGACACGT--ACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGC 147485 || | ||| || ||| | ||| || || || || |||| |||||| || || Sbjct 257164 TCT--TTTTCACTGGGTCCACGAACATGTTGACTGCAATCGAGGCCAAATTGCAAACAGC 257221 Query 147486 CGTCTCTTCGGCG-TCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGA 147544 || |||| | ||| ||||| ||||| || | |||| ||||||||||||||| Sbjct 257222 AACTTCATCGGGGCTCGA-GTACTCGACGATCTCAGTACACAAGTTGCTGCATTTTATCG 257280 Query 147545 CTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTC 147604 |||||| || | ||||||| ||| | |||||| ||||| ||| | |||||||| || Sbjct 257281 TTCCCAAGTTCTTCTGATTGGATTTTCTATTGCATGCGTCCTTGTACAGCATGTAGGGAG 257340 Query 147605 CGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATGCAGGTCCTGCGCTC--------G 147656 || ||||||||||| | || |||| | |||| |||| | |||| Sbjct 257341 TTCCAGTCTCGACTTGTG-----AC-ATAAGAAT-TGCA-GTCCAGAGCTCACGAGCTTT 257392 Query 147657 CACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTC 147716 |||| | || | ||| |||| |||||| | ||| | | ||| || || || Sbjct 257393 CACCTGACGCTTGAAACGGGCCTCTCCCTCGTACTGTGTGTAGAGCTTCTCGAATTCCTC 257452 Query 147717 GCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTC 147776 || || || ||||| ||||| | || || |||||||| ||||| ||||| Sbjct 257453 ACCCCAGGTGTCACATAGGCCTGGACATTCGTGGGGGCACATCAGACTCCACACATCGTC 257512 Query 147777 CGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGC 147836 ||| ||| ||| ||| || | |||||| | ||| || ||||| | ||| || || || Sbjct 257513 CGCCAGAACACGTTTCATGAATAAATCCGGGATCCAGAGTGCGTAAAAAAGTTCACGTGC 257572 Query 147837 TTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATGTCGGCGTG 147896 | | ||||| || |||| || | || || || | ||||| ||||| Sbjct 257573 TCGATATTCCTCTTTTCCTGTGTTTTTCTTGAGATCGAGAACATCGAATATGTCAGCGTG 257632 Query 147897 CCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACG---CTTTCCGCCCTGGTCGACATG 147953 |||||| || | || | ||| | || || ||| ||||| ||||| || |||| Sbjct 257633 CCAGGGCTCGAGATAAATGGCAAATGCTCCAGGACGTTTGTTTCCACCCTGATCAACATA 257692 Query 147954 GCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGT 148013 || | |||| || | || || | ||||||| | || || | | | || ||||| Sbjct 257693 ACGTGCTGTGTTATTGTAAACACGAAGCATGGGTACAAGCCCATTGGATATACCATTGGT 257752 Query 148014 ----GGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGC 148069 | ||| || || | || ||||| | ||| || || || ||||| || | Sbjct 257753 ACCAGCAAT---TCGTG-TCCCCTTGGCTCTGATACAGTGTACATTCACTCCAATTCCAC 257808 Query 148070 CGCCGTACTTTGAT-ATGGCAGCGCA-ATCGCCCAATGTCGT-GTAGATGCCGTCGATGC 148126 | | | |||| | ||| || ||| | | | | | || ||||||||| | |||| Sbjct 257809 CAGC-TGATTTGCTGATG--AGTGCACACCTCTTGAGGGTGTCGTAGATGCCATTAATGC 257865 Query 148127 TGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCG 148186 |||||| | | || | |||||| |||| || | | | || | || | Sbjct 257866 TGTCGTCAGTCATTGTCAGGAGAAAACAGCTGGACATCTGTTGTCTACCAGTGCAGGCTG 257925 Query 148187 AGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTT--GACTCATCATGCGATACGTCTC 148244 |||||||||| || ||||| || || || | | ||| || | || ||||| Sbjct 257926 AGAAAAGGGTTGGTGATGCGTGAGTGAAGTATCTCTCGGACAGAT--AGTTGTATGTCTC 257983 Query 148245 AATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTG 148304 ||| | |||||||| || |||| || |||| || || | ||| |||||||| Sbjct 257984 AATGACCCTGTCGATGTCCTCTTCGTGTATTCCCACAGCCACTCTCATCAGCATGTGGGC 258043 Query 148305 TGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTA 148364 || | || || |||| | |||||||| || ||||| | | |||||||| ||| | Sbjct 258044 AGGCCTCTCAGCTACTTTACCATTGATCTTCAGCAGATAACTTCTCTCGAGGGTCTTGAA 258103 Query 148365 ACCAAAGTACTTGTAA 148380 ||||| || |||||| Sbjct 258104 TCCAAAATAATTGTAA 258119 >seq37 Length=1171872 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||||||||| ||||| ||| | || | ||| || | |||||||||| | Sbjct 189085 GATTCTTTTTGAATATTGTAATCGGAAAGAGTTCTTCCATCCTCCAATTGTTTACCGGCA 189026 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| | ||||||||||||||| || || ||||||||||| ||| || ||| | Sbjct 189025 AAGATCAAACGCTGTTGATCTGGTGGGATACCTTCTTTATCTTGAATCTTAGCTTTAACA 188966 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | || || | | ||| || || | || | ||||| ||||||||||| ||| Sbjct 188965 TTTTCGATGGTGTCAGATGCCTCAACCTCCAGTGTAATGGTTTTGCCAGTCAGAGTCTTT 188906 Query 132110 ATGAAAATCTGCAT 132123 | ||| || ||||| Sbjct 188905 ACGAATATTTGCAT 188892 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| || | | | || |||||||||||||||||||| | || | ||| || Sbjct 189557 AACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGAGAGAGTTCTGCCATCCTC 189498 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 || |||||||| | |||| | ||| || ||||| ||||| ||||| || ||||| Sbjct 189497 CAGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGAGGGATGCCCTCCTTATCCTG 189438 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 || || || | | ||| | |||||| | | ||| ||||| | || | || || Sbjct 189437 GATCTTGGCCTTGACATTTTCAATAGTATCAGAGGCCTCTACTTCAAGTGTGATGGTCTT 189378 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||||||| || | ||||||||||| Sbjct 189377 TCCAGTCAGAGTCTTGACAAAAATCTGCAT 189348 >seq7 Length=2059422 Score = 82.4 bits (90), Expect = 7e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 131936 TTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAGATT 131995 ||||| |||||||| || | |||||| ||| ||||| ||||| || | | || Sbjct 739754 TTTTGGATGTTGTAATCAGAGAGAGTACGCCCATCCTCGAGTTGTTTCCCAGCGAAAATC 739813 Query 131996 AGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGTTCC 132055 | |||||||| |||||||| || || |||||||| ||| || ||| | | ||| Sbjct 739814 AATCGCTGTTGGTCTGGAGGAATTCCCTCTTTATCCTGAATCTTGGCTTTGACATTTTCG 739873 Query 132056 ACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAA 132115 | ||||| | ||||| || || | || | || || || |||| ||| || | |||| Sbjct 739874 ATGGTATCAGAAGGCTCAACCTCAAGGGTGATAGTCTTTCCCGTCAAAGTCTTGACGAAA 739933 Query 132116 ATCTGCAT 132123 |||||||| Sbjct 739934 ATCTGCAT 739941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476604992139120