Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq37 93.3 4e-14 >seq37 Length=1171872 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || || | || ||||| | ||||| | ||||| || ||| Sbjct 189348 ATGCAGATTTTTGTCAAGACTCTGACTGGAAAGACCATCACACTTGAAGTAGAGGCCTCT 189407 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | || || || || ||||| ||||| || || || |||||| Sbjct 189408 GATACTATTGAAAATGTCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCTGATCAG 189467 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | || | || || |||||||| || |||| |||| | || || ||||| Sbjct 189468 CAACGTTTGATCTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTCTCAGACTACAAC 189527 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 |||||||||||||| ||| |||| || || Sbjct 189528 ATTCAAAAAGAATCGACCCTTCACTTGGT 189556 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || ||||| || | || || ||| | || || | || || || || Sbjct 188892 ATGCAAATATTCGTAAAGACTCTGACTGGCAAAACCATTACACTGGAGGTTGAGGCATCT 188951 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || ||| || ||| |||||||| ||||| || || ||||| Sbjct 188952 GACACCATCGAAAATGTTAAAGCTAAGATTCAAGATAAAGAAGGTATCCCACCAGATCAA 189011 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || | | || | | ||| |||||| | || |||| |||| | | |||||||||| Sbjct 189012 CAGCGTTTGATCTTTGCCGGTAAACAATTGGAGGATGGAAGAACTCTTTCCGATTACAAT 189071 Query 25355 ATTCAAAAAGAATCCACC 25372 |||||||||||||||||| Sbjct 189072 ATTCAAAAAGAATCCACC 189089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445088602645440