Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 4e-15 >seq1 Length=5503185 Score = 96.9 bits (106), Expect = 4e-15 Identities = 132/180 (73%), Gaps = 6/180 (3%) Strand=Plus/Minus Query 146997 GTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCC 147056 ||| |||| |||||| || | || |||||| ||| |||||||| || || || ||||| Sbjct 1252329 GTGAGCCAGCATGTACGTCAACAATGAGTAGGAGGCAATGTTGAAAGGCACTCCGAGGCC 1252270 Query 147057 CATGTCCCCCGACCTC--TGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAAC 147114 |||||| | || || || || || || || ||||||||||| | ||| ||| | ||| Sbjct 1252269 CATGTCTGC--ACTTCGTTGATAGAGATGACAGGAGAGCTCCCCATTGGCTACGAAGAAC 1252212 Query 147115 TGGCAC-AGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGC 147173 | |||| ||| || ||||| ||||| ||||| ||| | ||| || || ||||| || Sbjct 1252211 T-GCACGAGGCAATGACACGGTGGCAGAGCCATTTTGGGGATGTCGGCTGGATTCCATGC 1252153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583480400068800