Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq113 156 4e-33 seq109 150 2e-31 seq37 132 5e-26 seq425 105 7e-18 seq17 98.7 1e-15 >seq113 Length=346302 Score = 156 bits (172), Expect = 4e-33 Identities = 466/711 (66%), Gaps = 10/711 (1%) Strand=Plus/Minus Query 8244 ATGTCAAAA--CGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAA 8301 |||||| || ||| || || | || |||||||||||||| ||||| ||||| ||| Sbjct 257362 ATGTCACAAGTCGAGACTGGAACTCCCTACATGCTGTACAAGGACGCATGCAATAGAAAA 257303 Query 8302 AGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAG 8361 |||||| | ||| |||| || || |||||||| |||| |||| || || || Sbjct 257302 TCCAATCAGAAGAACTTGGGAACGATAAAATGCAGCAACTTGTGTACTGAGATCGTCGAG 257243 Query 8362 TAC-AGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTAAACGCGTT 8420 ||| | || ||||| ||||| || ||||||||| | || ||| | | ||| ||| Sbjct 257242 TACTCGAGC-CCCGATGAAGTTGCTGTTTGCAATTTGGCCTCGATTGCAGTCAACATGTT 257184 Query 8421 CGTTGATCGACGCTCAAACACTTACGACTTTGAACAA-TTGAAAAACGCCGTGCAAGTGA 8479 ||| || | | ||| |||||| ||||| ||||| |||| | | ||| || | Sbjct 257183 CGTGGACCCAGTGAAAAAGACTTACAACTTT-AACAAGCTGAAGACAGTCGTCAAAATCG 257125 Query 8480 CGGTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAGAAGCGCGCG 8539 | | | ||| | || | | || |||||||||| ||| || | || || || | | Sbjct 257124 TCGCAAGAAATCTCGACAGAGTTATCGATGTCAATTATTACCCAATCGAGGAGGCAAGAG 257065 Query 8540 TATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTG 8599 | || |||||| | || | ||| | || | || || || |||||||| || || ||| Sbjct 257064 TCTCCAACATGAGACATCGTCCCATGGGAATTGGAGTTCAGGGTCTGGCAGATGCATTTC 257005 Query 8600 CCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGG 8659 || |||| || | ||| ||| | || || | | ||||| || | || | Sbjct 257004 TACTGATGCGTTATCCATTCGACAGCAATGAGGCCCAGAAACTCAATATCCAGATCTTCG 256945 Query 8660 AAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCC--GAGAATTGGGCAC 8717 | || ||||||| || || | || ||| || | || |||| ||||| |||||| Sbjct 256944 AGACCCTGTATTATGGTGCCCTCGAGGCCTCATGCGAGCTCGCCCAGGAGAA--GGGCAC 256887 Query 8718 GTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAA 8777 ||||| ||||| ||| || | ||||| || || | || || ||||||||| Sbjct 256886 CTACGAGACGTACAAAGGCTCACCAGTCAGCCAGGGCATCCTCCAGTATGACATGTGGGG 256827 Query 8778 TGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCGG 8837 ||| || || || | | ||| | ||| || | || ||||| || || ||| Sbjct 256826 TGTAACACCAACAAATCTCTGGGACTGGGCTGAACTCAAGGATAAAATATCTAAACACGG 256767 Query 8838 TTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGG 8897 | | | || || || | |||| ||||| || ||| | || || ||||| |||| Sbjct 256766 TATTAGGAACTCTCTCCTACTGGCACCAATGCCAACAGCCTCAACAGCCCAAATTCTGGG 256707 Query 8898 AAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGT 8948 |||||||| || ||||||| | ||||| |||| | |||| ||| || || Sbjct 256706 TAACAACGAGGCCATTGAGCCTTACACCAGCAACATCTACGCGAGGCGTGT 256656 >seq109 Length=386716 Score = 150 bits (166), Expect = 2e-31 Identities = 474/727 (65%), Gaps = 12/727 (2%) Strand=Plus/Plus Query 8244 ATGTCAAAA--CGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAA 8301 |||||| || ||| || || | || |||||||||||||||||||| |||||| ||| Sbjct 265459 ATGTCACAAGTCGAGACTGGGACCCCCTACATGCTGTACAAAGACGCATGCAACCGGAAA 265518 Query 8302 AGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAG 8361 |||||| | ||| |||| || || |||||||| ||||| |||| || || || Sbjct 265519 TCCAATCAGAAGAACTTGGGAACGATAAAATGCAGCAACTTGTGCACTGAGATCGTGGAG 265578 Query 8362 TAC-AGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTAAACGCGTT 8420 ||| | || ||||| ||| | || ||||||||| | || ||| | | ||| ||| Sbjct 265579 TACTCGAGC-CCCGATGAAATTGCTGTTTGCAATTTGGCCTCGATTGCAGTTAACATGTT 265637 Query 8421 CGTTGATCGACGCTCAAACACTTACGACTTTGAACAATTGAAAAACGCCGTGCAAGTGAC 8480 ||| |||| | ||| |||||||||||| | | |||| | | ||| |||| Sbjct 265638 CGTGGATCCAGTGAAAAAAACTTACGACTTTAAGAAGCTGAAGACAGTCGTCAAAGT--T 265695 Query 8481 GGTAC--GCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAGAAGCGCGC 8538 | ||| | || | || | | || || |||||| ||| || | || | || Sbjct 265696 GTTACCAGAAACCTCGACAGAGTGATCGACGTCAATCATTACCCACTTGAGCAGGCAAAA 265755 Query 8539 GTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTT 8598 || || ||| || | ||| | ||| | || | || || || |||||||| || || ||| Sbjct 265756 GTCTCCAACGTGAGACACCGTCCCATGGGAATTGGAGTTCAGGGTCTGGCAGATGCATTT 265815 Query 8599 GCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCG 8658 || |||| || | ||| ||| | || || | | ||||| || | || Sbjct 265816 CTACTGATGCGTTATCCATTCGACAGCGATGACGCCCAGAAACTCAATATCCAGATCTTC 265875 Query 8659 GAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCC--GAGAATTGGGCA 8716 || || |||||||||| ||| | || ||| || | || |||| ||||| ||||| Sbjct 265876 GAGACCCTGTATTACGGTGCACTCGAGGCCTCATGCGAGCTCGCCCAGGAGAA--GGGCA 265933 Query 8717 CGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGA 8776 | ||||| ||||| ||| || | ||||| || || | || |||||||||||| Sbjct 265934 CCTACGAGACGTACAAAGGCTCACCAGTCAGCCAGGGCATCCTCCAGTACGACATGTGGG 265993 Query 8777 ATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCG 8836 ||| || || || | | ||| | ||| | | || |||||| | || || Sbjct 265994 GTGTAACACCAACAAATCTCTGGGACTGGGCTAAACTCAAGGATAAAATTTCCAAACACG 266053 Query 8837 GTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGG 8896 || | | || || || | |||| ||||| || ||| | || || ||||| | | Sbjct 266054 GTATCAGGAACTCTCTCCTACTGGCACCAATGCCAACAGCCTCAACAGCCCAAATTCTTG 266113 Query 8897 GAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTGTTGGCCG 8956 | |||||||| || | ||||| | ||||| ||| | ||| |||||| || ||| | | Sbjct 266114 GGAACAACGAGGCCATCGAGCCCTACACCAGCAATATCTACTCGAGACGTGTATTGTCTG 266173 Query 8957 GCGATTT 8963 | || || Sbjct 266174 GTGAATT 266180 >seq37 Length=1171872 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||||| || || | |||||||| || |||||||| |||||||| ||||| ||| | Sbjct 189118 CCTCCTCGAAGACGGAGAACGAGGTGGAGGGTGGATTCTTTTTGAATATTGTAATCGGAA 189059 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || | ||||| || ||||| ||||||||||| ||||| || || Sbjct 189058 AGAGTTCTTCCATCCTCCAATTGTTTACCGGCAAAGATCAAACGCTGTTGATCTGGTGGG 188999 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| |||||||| || ||| || || | ||||| || | || || Sbjct 188998 ATACCTTCTTTATCTTGAATCTTAGCTTTAACATTTTCGATGGTGTCAGATGCCTCAACC 188939 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || ||||||||||| || || | ||| || ||||| ||||||||| Sbjct 188938 TCCAGTGTAATGGTTTTGCCAGTCAGAGTCTTTACGAATATTTGCATT 188891 Score = 102 bits (112), Expect = 8e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GC 134544 ||| |||||||| || | || | ||| || || ||||| ||||||||||||||||| | Sbjct 189575 TCCACCTCTGAGACGAAGAACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGA 189516 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | | | || | || || || ||||| || || || |||||||| |||||||| || | Sbjct 189515 GAGAGTTCTGCCA-TCCTCCAGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGAG 189457 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||| || || || || || || ||||| || | || || || | || | Sbjct 189456 GGATGCCCTCCTTATCCTGGATCTTGGCCTTGACATTTTCAATAGTATCAGAGGCCTCTA 189397 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || || || ||||| || || || | ||| || || ||||| |||||| Sbjct 189396 CTTCAAGTGTGATGGTCTTTCCAGTCAGAGTCTTGACAAAAATCTGCATT 189347 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || ||||| || | || | || || ||||| || || || || |||||||| Sbjct 189348 TTCCACCCCTGAGACGAAGAACCAAATGGAGAGTGGACTCTTTCTGGATATTGTAGTCCG 189289 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 || || || || | ||||| || || || |||||||||||||| || || | Sbjct 189288 AAAGAGTTCTTCCATCCTCCAATTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGTG 189229 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||||||||| || || || || |||||| || | |||||| || | ||| | Sbjct 189228 GAATGCCTTCTTTGTCCTGTATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCTTCAA 189169 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| || || || || || || | || || ||||| || ||||| Sbjct 189168 CTTCGAGGGTGATCGTCTTTCCTGTAAGTGTCTTTACGAATATCTGCAT 189120 >seq425 Length=33725 Score = 105 bits (116), Expect = 7e-18 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || |||||||| ||||||||||| || | ||| | || |||||||| Sbjct 29718 GTGAAGTGTTGATTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGTCCATCTTCGAGCTG 29777 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || || || |||| | ||| || || || || || || || || || || ||||| Sbjct 29778 CTTACCAGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATTTT 29837 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 |||||| || | ||||||||| | || || ||||| || |||||||| || || Sbjct 29838 GGCTTTGACATTTTCGATTGTGTCGGAAGCCTCTACCTCGAGGGTGATGGTTTTCCCCGT 29897 Query 134690 TAAAGTTTTAACGAAAATTTGCATTTTG 134717 || |||||||| || || ||||| ||| Sbjct 29898 TAGGGTTTTAACAAAGATCTGCATGTTG 29925 >seq17 Length=1605837 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||||| | || | || || || || ||||| || || ||||| || | Sbjct 83765 CCTCCACGAAGTCGAAGGACCAAATGAAGGGTAGACTCCTTCTGGATATTGTAATCAGAA 83824 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || |||||||| || || |||||||| | |||||| || || || Sbjct 83825 AGAGTGCGTCCGTCCTCCAGCTGTTTTCCAGCGAAAATCAATCTCTGCTGGTCTGGGGGA 83884 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || ||||| ||||| || | ||||| |||| || || Sbjct 83885 ATTCCCTCCTTGTCCTGGATTTTAGCCTTGACGTTCTCAATAGTGTCTGACGCCTCGACC 83944 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||||||||| || || | ||| || ||||| || ||||| Sbjct 83945 TCAAGGGTAATGGTTTTCCCTGTGAGAGTCTTGACGAAGATCTGCAT 83991 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| || ||||||||||| || |||||||| || Sbjct 82952 CCCCCACGGAGACGGAGGACTAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGAG 83011 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || |||||||| || || || ||||| | |||||| || || || Sbjct 83012 AGTGTGCGTCCGTCCTCCAGCTGTTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGA 83071 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || ||||| ||||| || | ||||| || | || || Sbjct 83072 ATCCCCTCCTTGTCCTGGATTTTAGCCTTGACGTTTTCGATGGTGTCTGAAGCCTCGACC 83131 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || |||||||| || || | ||| || ||||| || ||||| Sbjct 83132 TCAAGGGTGATGGTTTTCCCTGTGAGAGTCTTGACGAAGATCTGCAT 83178 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||||||||||| || |||||||| || | ||| | ||| || ||||| Sbjct 83332 GTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGAGAGTGTGCGTCCGTCCTCCAGCTG 83391 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || || || ||||| | |||||| || || || || || || || || || ||||| Sbjct 83392 TTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTGGATTTT 83451 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| || | ||||| || | || || || || || |||||||| || || Sbjct 83452 AGCCTTGACGTTTTCGATGGTGTCTGAAGCCTCGACCTCAAGGGTGATGGTTTTCCCTGT 83511 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | ||| || ||||| || ||||| Sbjct 83512 GAGAGTCTTGACGAAGATCTGCAT 83535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505391817185840