Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq14 86.0 5e-12 >seq14 Length=1632344 Score = 86.0 bits (94), Expect = 5e-12 Identities = 357/562 (64%), Gaps = 6/562 (1%) Strand=Plus/Minus Query 19257 TAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGTTTTTTCTGCAGATGT 19316 |||||| || || ||||| | |||| |||| ||| | || ||| || |||| | Sbjct 36663 TAAAGAATTCAGTGCCATCTTCAGACGAGCGTTTGCCTCGAGAGTATTTCCTCCAGAGCT 36604 Query 19317 CATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTTATGGGCCACCGGGTTG 19376 | | |||||||| || ||||| || || || | |||||||| ||||| || Sbjct 36603 GGTGATGCAATTGGGTTGCAAACACGTCAAGGGCATTCTCCTTTATGGTCCACCTGGAAC 36544 Query 19377 TGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTACAAAACAACCTCCCAAAAT 19436 ||| || || | || || | | || | | | | | | || | || || || Sbjct 36543 TGGTAAGACCCTGATGGCACGTCAGATTGGAACAATGTTAAATGCACGAGAGCCAAAGAT 36484 Query 19437 TGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACG 19496 ||| ||||| || | || | | || || || || | |||| |||||| | | Sbjct 36483 TGTTAATGGGCCCCAGATTCTCGACAAGTACGTGGGGGAGAGTGAAGCAAATGTGAGGAG 36424 Query 19497 TTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTCTTTGCACAT 19556 |||||||||| || ||||| || | || | | || | ||| ||| | ||||| Sbjct 36423 ACTGTTTGCTGATGCCGAAGAGGAGGAGAAGAGACTCGGTCCCAACAGTGGACTCCACAT 36364 Query 19557 TATAATACTAGATGAATTGGACGCAATCTGTAAG---CAAAGAGGTTCTGGTGTAAAT-- 19611 ||||| | || || | || || ||||| ||| | | || || || || |||| Sbjct 36363 AATAATCTTCGACGAGATCGATGCCATCTGCAAGTCTCGAGGAAGTGTTGCTGGAAATAC 36304 Query 19612 -GGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACT 19670 ||||| || ||||| ||||| || || | | | || | || |||||| | || | Sbjct 36303 TGGAGTCCACGACACAGTTGTGAACCAGTTGTTAGCGAAGATCGATGGTGTTGAGCAGTT 36244 Query 19671 GAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATT 19730 |||||||||| |||| ||||| ||||| || || ||| | || ||| ||| | | Sbjct 36243 GAATAATATTCTAGTGATTGGGATGACGAACCGAAGGGACATGATCGACGAGGCCCTCCT 36184 Query 19731 ACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACGTGT 19790 ||| || ||| | ||||| | |||| || || | | || ||||| |||| | | Sbjct 36183 ACGTCCTGGTAGATTGGAGGTGCAGATGGAGATCAGTCTTCCTGATGAGCATGGAAGATT 36124 Query 19791 GGAAATTTTAAACATACATACA 19812 ||||| | || || |||||| Sbjct 36123 CCAAATTCTTAATATTCATACA 36102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397450952557210