Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq109 205 1e-47 seq113 188 9e-43 >seq109 Length=386716 Score = 205 bits (226), Expect = 1e-47 Identities = 937/1465 (64%), Gaps = 27/1465 (2%) Strand=Plus/Minus Query 110701 TCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTG 110759 |||| |||||| || | ||||| || || | | || || || ||||||| |||| | Sbjct 266160 TCTCGAGTAGATATTGCTGGTGTAGGGCTCGATGGCCTCGTTGTT-CCCAAGAATTTGGG 266102 Query 110760 CGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGA 110819 | || |||||||||||||||||||||| | ||| ||| | | ||| | | | Sbjct 266101 CTGTTGAGGCTGTTGGCATTGGTGCCAGTAGGAGAGAGTTCCTGATACCGTGTTTGGAAA 266042 Query 110820 TGCGTTCCTTGAGAACATCCCAGTCGTAG----TTGAGCTTGGTTTCACCTTCCCACATG 110875 | |||||||| | ||||||| || ||| ||||| | || |||||||| Sbjct 266041 TTTTATCCTTGAGTTTAGCCCAGTCCCAGAGATTTG---TTGGTGTTACAC-CCCACATG 265986 Query 110876 TCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGG 110935 || |||| || | || ||| | || || || | | || || |||| || | Sbjct 265985 TCGTACTGGAGGATGCCCTGGCTGACTGGTGAGCCTTTGTACGTCTCGTAGGTGCCCTTC 265926 Query 110936 GCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGA 110995 | | || | || || ||||| || | ||| ||||| ||| || ||||| | Sbjct 265925 TCCTGGGCGAGCTCGCATGAGGCCTCGAGTGCACCGTAATACAGGGTCTCGAAGATCTGG 265866 Query 110996 GCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCC 111055 ||| | | || ||| ||||| || |||| || || || | |||| |||| Sbjct 265865 ATATTGAGTTTCTGGGCGTCATCGCTGTCGAATGGATAACGCATCAGTAGAAATGCATCT 265806 Query 111056 GCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATT--AGACTTTCGCGCAG 111113 || ||||| ||||| || | || || || | ||||| || || ||||||| || | | Sbjct 265805 GCCAGACCCTGAACTCCAATTCCCATGGGACGGTGTCTCACGTTGGAGACTTTTGC-CTG 265747 Query 111114 TCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTG 111173 ||||| || ||| ||| ||| || |||| || || ||| ||||||||| ||||| Sbjct 265746 -CTCAAGTGGGTAATGATTGACGTCGATCACTCTGTCGAGGTTTCTGGTAACAA-CTTTG 265689 Query 111174 T-GATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGA 111232 || | | || || | | | || |||| || || || || || | | Sbjct 265688 ACGACTGTCTTCAGCTTCTTAAAGTCGTAAGTTTTTTTCACTGGATCCACGAACATGTTA 265629 Query 111233 AGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATT 111292 | || || || ||||||||||||||||| | ||||| | |||||| | || Sbjct 265628 ACTGCAATCGAGGCCAAATTGCAAACAGCAATTTCATCGGGGCTCGAGTACTCCACGATC 265569 Query 111293 TCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTG 111352 || || || |||||| | || ||||| ||||| ||||| || || ||| |||| Sbjct 265568 TCAGTGCACAAGTTGCTGCATTTTATCGTTCCCAAGTTCTTCTGATTGGATTTCCGGTTG 265509 Query 111353 CACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCC 111412 || || || ||||| ||||||||||| ||||| ||||| ||||| | ||||| || Sbjct 265508 CATGCGTCTTTGTACAGCATGTAGGGGGTCCCAGTCTCGACTTGTGACATAAGAATTGCA 265449 Query 111413 TTCCAAACATCGGCGGCTGGTACAATGGCG-TTGGCCCGTCCCTCCGCCTCGTACTTTGT 111471 |||| | ||| || || || || ||| || |||| |||||| ||| Sbjct 265448 GTCCAGAGATCACGAGCCTTCACC-TGACGCTTGAAACGAGCCTCGTTCTCGTATTTTAC 265390 Query 111472 GTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACA 111531 |||||| |||||||| |||||| | ||| | || ||||| || || || || Sbjct 265389 GTAGAGATTCTCAAACTCTTCACCCCAAGAGTCACAAAGGCCTGGACACTCGTGGGGGCA 265330 Query 111532 GAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 111591 | ||| ||| |||| | || || || |||||||| || || |||||||| || Sbjct 265329 CATCAGACTCCACATACCATCCGCCAGGACTCGTTTCATGAATAGATCAGGAATCCAGAG 265270 Query 111592 GGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC-TCAA 111650 | | || || || | | | || || | ||| ||| || | | || | Sbjct 265269 TGCGTAGAACAGCTCACGCGCTCTATATTCCTCCTTTCCTGTGTTCT-TCTTGAGATCGA 265211 Query 111651 GGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTT 111706 | | || | ||| || |||||||| ||||| ||||| | || | | || | || Sbjct 265210 GAACATCAAAGATGTCAGCGTGCCAGGGCTCGAGATAAATGGCAAATGCGCCAGGACGTT 265151 Query 111707 CGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATA 111766 | || | | |||| || || || |||||| || | || |||||||| || | | Sbjct 265150 TGTTTCC-ACCCTGATCAACGTAACGTGCTGTGTTATTGTAAACACGAAGCATGGGTACA 265092 Query 111767 ATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGG 111826 | |||| ||| |||||| || || ||| || | |||||||| | | || Sbjct 265091 AGCCCATTGGATACACCATTGGTACCAGCAATTCGTGTCCCCTTGGCTCTGATACAGTGA 265032 Query 111827 ATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCA 111886 | | || |||||||| ||||| |||| || | |||||| | | || || | Sbjct 265031 ACATTCACTCCAATACCACCAGCTGACTTGCTGACAAGTGCACACCTCTTGAGGGTGTCG 264972 Query 111887 TAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGT 111946 ||||| || | ||| |||||| | | | | |||||| || ||||||||||| || Sbjct 264971 TAGATGCCATCGATGCTGTCCTCAGTCATTGTTAGAAGGAAACAGCTGGACATCTGTTGT 264912 Query 111947 CTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACAT 112005 | || | || |||||||||||||| ||||||| |||| || || | ||||| Sbjct 264911 ATACAAGTGCAGGCTGAGAAGAGGGTTGGTGATGCGTGAGTGAA-GTATCTCTCGGACAG 264853 Query 112006 CTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCG 112065 | || ||||||||| | ||| | || || ||| |||| || || | || || | Sbjct 264852 ATAGTTGTATGTCTCAATGACCCTGGCGATATCCTCCTCGTGTATTCCCACAGCCACTCT 264793 Query 112066 CATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTT 112125 ||| | ||||| || | || | || |||||| || || | || || ||| | Sbjct 264792 CATCAGCATGTGGGCAGGCCTCTCAACGACTTTGCCATTGATCCTCAGCAGGTAACTCCT 264733 Query 112126 CTCAAGGGTTTTGAGACCAAAGTAA 112150 ||||||||| |||| ||||||||| Sbjct 264732 CTCAAGGGTCTTGAAGCCAAAGTAA 264708 >seq113 Length=346302 Score = 188 bits (208), Expect = 9e-43 Identities = 1111/1754 (63%), Gaps = 65/1754 (4%) Strand=Plus/Plus Query 110357 TTTGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATA 110416 |||| || ||| |||||||| || ||||| || || | |||| || | | |||||| Sbjct 256317 TTTGTTCTGAGGTAGTACATTCCAGTCTTCAGGCCAGACTCCCATCCGAAGAAATGCATG 256376 Query 110417 GAAGAGAGCTT----GGACATCGTTGGACTTTCCAT--GAAGAGGTTCAT--ACTTTGAC 110468 || | |||||| ||| |||||| || |||| ||| | || | ||| ||| Sbjct 256377 GATGTGAGCTTCTCGGGA----GTTGGATTTGCCATATGAACA--TTGGTGGACTGGGAC 256430 Query 110469 TTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAATGA-CATCCTTCATCTTAATT 110527 | |||| |||||| ||| || | || ||||| | | || |||||| | |||| Sbjct 256431 T--GGTCGATGAAGGCCCCACGATCAGCAGCCATCTTGAGGATCATCCT-CTGGGGAATT 256487 Query 110528 TCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATG 110587 ||||| ||||| | || || ||||| || ||||||| | ||| |||||||| Sbjct 256488 TCCCAGACTGTTCTGTACAGTGCCTTGAGGTCTGCTGGGATGTTGTCGATGTTCTGGATC 256547 Query 110588 GAACCCCCCGCCTTCACCATGA---GATCCTTCATATCCTTGGACCAGAGACCAATCTTC 110644 || || || || | || | | | |||||| || | | ||||||| || || Sbjct 256548 GAGCCATT-GC--TCGCTATTATCTGGTTCTTCATGTCGTCGTCCCAGAGATCACGCTCG 256604 Query 110645 TTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTC 110704 ||||||| || | || || ||||| | || ||||| | || | ||| Sbjct 256605 GTGAGGTCCTTCAGCAGATGGGGATTGACTACTTGGAATTCACCAGACAGTACACGCCTC 256664 Query 110705 AGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTG 110764 ||||||||| | ||||| || |||| | || || ||||||| ||||| || || Sbjct 256665 GCGTAGATGTTGCTGGTGTAAGGCTCAATGGCCTCGTTGTTACCCAGAATTTGGGCTGTT 256724 Query 110765 GAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGT 110824 |||||||||||||||||||||| | ||| ||| | || ||| | | | ||| | Sbjct 256725 GAGGCTGTTGGCATTGGTGCCAGTAGGAGAGAGTTCCTAATACCGTGTT--TAGATATTT 256782 Query 110825 --TCCTTGAGAACATCCCAGTCGTAG----TTGAGCTTGGTTTCACCTTCCCACATGTCA 110878 |||||||| || ||||||| || ||| ||||| | | | ||||||||||| Sbjct 256783 TATCCTTGAGTTCAGCCCAGTCCCAGAGATTTG---TTGGTGTTA-CACCCCACATGTCA 256838 Query 110879 AACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCT 110938 |||| || | || ||| | || || || | | || || |||| || | | Sbjct 256839 TACTGGAGGATGCCCTGGCTGACTGGTGAGCCTTTGTACGTCTCGTAGGTGCCCTTCTCC 256898 Query 110939 TCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCA 110998 | || | || || ||||| |||| | | ||||| ||| || ||||| | | Sbjct 256899 TGGGCGAGCTCGCATGAGGCCTCGAGGGCACCATAATACAGGGTCTCGAAGATCTGGATA 256958 Query 110999 TTCATCTCCTTGGCTTCAT--CTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCG 111056 || | | || ||| |||| ||| || |||| || || || | |||| |||| | Sbjct 256959 TTGAGTTTCTGGGCCTCATTGCTG--TCGAATGGATAACGCATCAGTAGAAATGCATCTG 257016 Query 111057 CGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT 111116 | ||||| ||||| || | || || || | |||| ||| || || || || || Sbjct 257017 CCAGACCCTGAACTCCAATTCCCATGGGACGATGTCTCATGTTGGAGACTCTTGCCTCCT 257076 Query 111117 CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176 | | || ||| |||| || || |||| || |||||| | | || || || || Sbjct 257077 CGATTGGGTAATAATTGACATCGATAACTCTGTCGAGATTTCTTGCGACGATTTTGACGA 257136 Query 111177 -TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTC-TCTTCATTG-----ACATACTTT 111229 | || | | || || ||| || |||| | |||| || || || | Sbjct 257137 CTGTCTTCAGCTTGTT-------AAAGTTGTAAGTCTTTTTCACTGGGTCCACGAACATG 257189 Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 | || || || ||||||||||||||||| ||||| | |||||| | Sbjct 257190 TTGACTGCAATCGAGGCCAAATTGCAAACAGCAACTTCATCGGGGCTCGAGTACTCGACG 257249 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || ||||| |||||| | || ||||| ||||| ||||| || || || | Sbjct 257250 ATCTCAGTACACAAGTTGCTGCATTTTATCGTTCCCAAGTTCTTCTGATTGGATTTTCTA 257309 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||||| || |||||||| ||||||||||| || || ||||| ||||| | ||||| Sbjct 257310 TTGCATGCGTCCTTGTACAGCATGTAGGGAGTTCCAGTCTCGACTTGTGACATAAGAATT 257369 Query 111410 GCCTTCCAAACATCGGCGGCTGGTACAATGGCG-TTGGCCCGTCCCTCCGCCTCGTACTT 111468 || |||| | || ||| || || || ||| || |||| ||||||||| Sbjct 257370 GCAGTCCAGAGCTCACGAGCTTTCAC-CTGACGCTTGAAACGGGCCTCTCCCTCGTACTG 257428 Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGG 111528 ||||||||| || || ||||||||| | ||| | || ||||| | || || Sbjct 257429 TGTGTAGAGCTTCTCGAATTCCTCACCCCAGGTGTCACATAGGCCTGGACATTCGTGGGG 257488 Query 111529 ACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCA 111588 || | ||| ||| | | | || ||| || |||||||| | || || ||||| Sbjct 257489 GCACATCAGACTCCACACATCGTCCGCCAGAACACGTTTCATGAATAAATCCGGGATCCA 257548 Query 111589 CAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCT-TGGTTGAGTCGTAACT 111647 || | |||| || || | ||| || || | ||| || || | | | | Sbjct 257549 GAGTGCGTAAAAAAGTTCACGTGCTCGATATTCCTCTTTTCCTGTGTTTTTCTTG-AGAT 257607 Query 111648 CAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----C 111703 | || | || | || || |||||||| ||||| ||||| | || | | ||| | Sbjct 257608 CGAGAACATCGAATATGTCAGCGTGCCAGGGCTCGAGATAAATGGCAAATGCTCCAGGAC 257667 Query 111704 TTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGA 111763 || | ||| | |||| ||||| || |||||| || | || |||||||| || Sbjct 257668 GTTTG-TTTCCACCCTGATCAACATAACGTGCTGTGTTATTGTAAACACGAAGCATGGGT 257726 Query 111764 ATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCA 111823 | || |||| ||| |||||| || || ||| || | |||||||| | | Sbjct 257727 ACAAGCCCATTGGATATACCATTGGTACCAGCAATTCGTGTCCCCTTGGCTCTGATACAG 257786 Query 111824 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 111883 || | | || ||||| || ||||| | || ||| | |||||| | | || || Sbjct 257787 TGTACATTCACTCCAATTCCACCAGCTGATTTGCTGATGAGTGCACACCTCTTGAGGGTG 257846 Query 111884 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 111943 | ||||| || || || ||| || | | | | || || || ||||||||||| Sbjct 257847 TCGTAGATGCCATTAATGCTGTCGTCAGTCATTGTCAGGAGAAAACAGCTGGACATCTGT 257906 Query 111944 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGA 112002 |||| || | || ||| |||||||||| ||||||| |||| || || | ||| Sbjct 257907 TGTCTACCAGTGCAGGCTGAGAAAAGGGTTGGTGATGCGTGAGTGAA-GTATCTCTCGGA 257965 Query 112003 CATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGAC 112062 || | || ||||||||| | ||| || ||||| || |||| || || | || || Sbjct 257966 CAGATAGTTGTATGTCTCAATGACCCTGTCGATGTCCTCTTCGTGTATTCCCACAGCCAC 258025 Query 112063 CCGCATGAACATGT 112076 | ||| | ||||| Sbjct 258026 TCTCATCAGCATGT 258039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628023819883200