Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq113 235 7e-57 seq109 235 7e-57 >seq113 Length=346302 Score = 235 bits (260), Expect = 7e-57 Identities = 1160/1825 (64%), Gaps = 61/1825 (3%) Strand=Plus/Plus Query 117831 TTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATT 117890 |||| || |||||||||||| || ||||| || || || ||| | | | |||||| Sbjct 256317 TTTGTTCTGAGGTAGTACATTCCAGTCTTCAGGCCAGACTCCCATCCGAAGAAATGCATG 256376 Query 117891 GAGGACAACTTGGAGAGGGTTGGACTTTCCAT--GAAGAGGTTCATACTTTGGGATTGAT 117948 || | | ||| | | |||||| || |||| ||| | || | ||||| || | Sbjct 256377 GATGTGAGCTTCTCGGGAGTTGGATTTGCCATATGAACA--TTGGTGGACTGGGACTGGT 256434 Query 117949 CGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA-CATCCTTCATCTTG---ATTTCC 118004 |||||||| || ||||| || ||||| | | | |||||| || | |||||| Sbjct 256435 CGATGAAGGCCCCACGATCAGCAGCCATCTTGAGGATCATCCT----CTGGGGAATTTCC 256490 Query 118005 CACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAT 118064 || || || ||||| || ||| | || ||||||| | |||| || ||||| || Sbjct 256491 CAGACTGTTCTGTACAGTGCCTTGAGGTCTGCTGGGATGTTGTCGATGTTCTGGATCGAG 256550 Query 118065 CCA---CCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTG 118121 ||| | ||| | | | | | |||||| || | ||||||| || || || Sbjct 256551 CCATTGCTCGCTATTATCTGG---TTCTTCATGTCGTCGTCCCAGAGATCACGCTCGGTG 256607 Query 118122 AGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA 118181 || |||| || ||||| |||||| || || ||||| | || || ||| Sbjct 256608 AGGTCCTTCAGCAGATGGGGATTGACTACTTGGAATTCACCAGACAGTACACGCCTCGCG 256667 Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| ||| | ||||| ||||||| | ||| |||||||||| ||||||||||| ||| Sbjct 256668 TAGATGTTGCTGGTGTAAGGCTCAATGGCCTCGTTGTTACCCAGAATTTGGGCTGTTGAG 256727 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 ||||| ||||| ||||||| || || ||| | | ||| | || || ||| Sbjct 256728 GCTGTTGGCATTGGTGCCAGTAGGAGAGAGTTCCTAATACCGTGTTTAGATATTTTATCC 256787 Query 118302 TTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGT-----CTCCCCCTGCCACATATCAAACT 118356 ||||| | ||||||| | ||| ||||| | | || |||||| ||| ||| Sbjct 256788 TTGAGTTCAGCCCAGTCCCA---GAGATTTGTTGGTGTTACACC--CCACATGTCATACT 256842 Query 118357 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 118416 ||||||| || ||| |||| || || | | ||||| || | ||||| ||| | Sbjct 256843 GGAGGATGCCCTGGCTGACTGGTGAGCCTTTGTACGTCTCGTAGGTGCCCTTCTCCTGGG 256902 Query 118417 CCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCA 118476 | | ||| | ||||||||||| | | ||||| || || || || | ||| | Sbjct 256903 CGAGCTCGCATGAGGCCTCGAGGGCACCATAATACAGGGTCTCGAAGATCTGGATATTGA 256962 Query 118477 TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCA-CAAAATAAATACATCCGCGAGA 118535 | || |||||| | | || || | || ||| || | |||| |||| || ||| Sbjct 256963 GTTTCTGGGCCTCATTGCTGTCGAATG-GATAACGCATCAGTAGAAATGCATCTGCCAGA 257021 Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT--AGACTTCCGAGCGGTCTCCA 118593 || || || || | || || || ||||||||||| || ||||| | || ||| | Sbjct 257022 CCCTGAACTCCAATTCCCATGGGACGATGTCTCATGTTGGAGACT--CTTGCCTCCTCGA 257079 Query 118594 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 118653 || ||| |||| ||||||||| || | |||||| | | ||| | || || | Sbjct 257080 TTGGGTAATAATTGACATCGATAACTCTGTCGAGATTTCTTGCGACGATTTTGACGACTG 257139 Query 118654 CATGAAGCTTTTCGTAATCAAAACTGCGAGTC-TCTTCATTG-----ACATACTTAGGAA 118707 | ||||| | ||| || |||| | |||| || || || | | Sbjct 257140 TCTTCAGCTT------GTTAAAGTTGTAAGTCTTTTTCACTGGGTCCACGAACATGTTGA 257193 Query 118708 GGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTT 118767 || || || |||| ||| || |||| ||||| | |||||| | || | Sbjct 257194 CTGCAATCGAGGCCAAATTGCAAACAGCAACTTCATCGGGGCTCGAGTACTCGACGATCT 257253 Query 118768 CCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 118827 | || |||||||| | || || || ||||||||||| ||||| || ||| | || | Sbjct 257254 CAGTACACAAGTTGCTGCATTTTATCGTTCCCAAGTTCTTCTGATTGGATTTTCTATTGC 257313 Query 118828 ACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCT 118887 | || |||||||| |||||||| || || || ||||| ||| ||| | ||||| || Sbjct 257314 ATGCGTCCTTGTACAGCATGTAGGGAGTTCCAGTCTCGACTTGTGACATAAGAATTGCAG 257373 Query 118888 TCCAGACATCGGCAGCTGGCACAGTGGCG-TTGGCTCGCCCCTCTTCCTCGTACTTTGTG 118946 |||||| || |||| ||| || || ||| || ||||| ||||||||| |||| Sbjct 257374 TCCAGAGCTCACGAGCTTTCAC-CTGACGCTTGAAACGGGCCTCTCCCTCGTACTGTGTG 257432 Query 118947 TAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAG 119006 ||||| || || || |||||| || || | || ||||| | | ||||| Sbjct 257433 TAGAGCTTCTCGAATTCCTCACCCCAGGTGTCACATAGGCCTGGACATTCGTGGGGGCAC 257492 Query 119007 AAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 119066 | ||| ||| | | || || ||| || |||||||| | || ||||||||||| Sbjct 257493 ATCAGACTCCACACATCGTCCGCCAGAACACGTTTCATGAATAAATCCGGGATCCAGAGT 257552 Query 119067 GCCGAGAAGAGATCCCGACAGCGAGCTTCTTC-ATCCCCCTGATTGAGACGCAACTCCAA 119125 || | || || || || ||| ||| || | || || || | | || | Sbjct 257553 GCGTAAAAAAGTTCACGTGCTCGATATTCCTCTTTTCCTGTGTTTTTCTTG-AGATCGAG 257611 Query 119126 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG 119185 || || | || || |||||||| || || || || | || | || || | |||| Sbjct 257612 AACATCGAATATGTCAGCGTGCCAGGGCTCGAGATAAATGGCAAATGCTCC---AGGACG 257668 Query 119186 ------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAAT 119239 ||| |||| | ||||| | || ||| || | ||||||||||| || | Sbjct 257669 TTTGTTTCCACCCTGATCAACATAACGTGCTGTGTTATTGTAAACACGAAGCATGGGTAC 257728 Query 119240 GATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTG 119299 | |||| |||| ||||| || || ||| || | | |||||||||| | ||| Sbjct 257729 AAGCCCATTGGATATACCATTGGTACCAGCAATTCGTGTCCCCTTGGCTCTGATACAGTG 257788 Query 119300 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 119359 | | || ||||| || || || | || ||| | || ||| | |||| || | Sbjct 257789 TACATTCACTCCAATTCCACCAGCTGATTTGCTGATGAGTGCACACCTCTTGAGGGTGTC 257848 Query 119360 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGG 119419 |||||| |||| || ||| | | ||| | ||| || ||||| ||||| || | Sbjct 257849 GTAGATGCCATTAATGCTGTCGTCAGTCATTGTCAGGAGAAAACAGCTGGACATCTGTTG 257908 Query 119420 CCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACA 119478 || || | || ||| || ||||||| ||||| |||| || || | ||||| Sbjct 257909 TCTACCAGTGCAGGCTGAGAAAAGGGTTGGTGATGCGTGAGTGAA-GTATCTCTCGGACA 257967 Query 119479 TCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCC 119538 | || ||| ||||| | ||| | ||||| || |||| || || | | || | Sbjct 257968 GATAGTTGTATGTCTCAATGACCCTGTCGATGTCCTCTTCGTGTATTCCCACAGCCACTC 258027 Query 119539 GCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCT 119598 ||| | ||||| || | || | |||||| || | || | || ||||| Sbjct 258028 TCATCAGCATGTGGGCAGGCCTCTCAGCTACTTTACCATTGATCTTCAGCAGATAACTTC 258087 Query 119599 TCTCCAAGGTCTTGAGACCAAAATA 119623 |||| | |||||||| |||||||| Sbjct 258088 TCTCGAGGGTCTTGAATCCAAAATA 258112 >seq109 Length=386716 Score = 235 bits (260), Expect = 7e-57 Identities = 1089/1712 (64%), Gaps = 51/1712 (3%) Strand=Plus/Minus Query 117939 TGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA-CATCCTTCATCTT 117997 ||||| |||||||||||| || ||||| || ||||| | | | |||||| || Sbjct 266396 TGGGACTGATCGATGAAGGCCCCACGATCAGCTGCCATCTTGAGGATCATCCT----CTG 266341 Query 117998 G---ATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATT 118054 | || ||||| || || ||||| || ||| || || ||||||| |||| || Sbjct 266340 GGGAATCTCCCAGACTGTTCTGTACAGTGCCTTGATGTCTGCTGGGATGCTGTCGATGTT 266281 Query 118055 TTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAAT 118114 ||||| || ||| | | || || | | |||| || | |||||| Sbjct 266280 CTGGATCGAGCCATTGTTCGCTATTATCAGGTTCCTCATCTCGTCGTCCCAGAGGTTGCG 266221 Query 118115 CTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCG 118174 || |||| |||| || |||||| |||||| || || ||||| | | || Sbjct 266220 CTCGGTGAGGTCCTTCAGGAGATGGGGATTGACCACCTGGAATTCACCAGACAATACACG 266161 Query 118175 TCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGA-TTTGGG 118233 |||| ||||||||| | ||||| ||||| | | ||| ||||| ||||||| |||||| Sbjct 266160 TCTCGAGTAGATATTGCTGGTGTAGGGCTCGATGGCCTCGTTGTT-CCCAAGAATTTGGG 266102 Query 118234 CTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAA 118293 |||| |||||||| ||||| ||||||| || || ||| | || ||| | || || Sbjct 266101 CTGTTGAGGCTGTTGGCATTGGTGCCAGTAGGAGAGAGTTCCTGATACCGTGTTTGGAAA 266042 Query 118294 TGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTC-----TCCCCCTGCCACAT 118348 | |||||||| ||||||| || || ||||| | | || |||||| Sbjct 266041 TTTTATCCTTGAGTTTAGCCCAGTCCCAG---AGATTTGTTGGTGTTACACC--CCACAT 265987 Query 118349 ATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTC 118408 || |||||||||| || ||| |||| || || | | ||||| || | ||||| Sbjct 265986 GTCGTACTGGAGGATGCCCTGGCTGACTGGTGAGCCTTTGTACGTCTCGTAGGTGCCCTT 265927 Query 118409 AACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCG 118468 ||| || | ||| | |||||||| || ||| ||||| || || || || | Sbjct 265926 CTCCTGGGCGAGCTCGCATGAGGCCTCGAGTGCACCGTAATACAGGGTCTCGAAGATCTG 265867 Query 118469 AGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCA-CAAAATAAATACAT 118527 ||| | | || ||| || ||| || || | || ||| || | |||| ||| Sbjct 265866 GATATTGAGTTTCTGGGCGTCATCGCTGTCGAATG-GATAACGCATCAGTAGAAATGCAT 265808 Query 118528 CCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT--AGACTTCCGAGC 118585 | || ||||| || || || | || || || || ||||||| || |||||| | Sbjct 265807 CTGCCAGACCCTGAACTCCAATTCCCATGGGACGGTGTCTCACGTTGGAGACTTTTGCCT 265748 Query 118586 GGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTT 118645 | ||| | || ||| ||| ||||| || || | || ||| |||| ||||| || Sbjct 265747 G--CTCAAGTGGGTAATGATTGACGTCGATCACTCTGTCGAGGTTTCTGGTAACAACTTT 265690 Query 118646 TGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGG 118705 || | | ||||| | | || || | || || || || || | Sbjct 265689 GACGACTGTCTTCAGCTTCTTAAAGTCGTAAGTTTTTTTCACTGGATCCACGAACATGTT 265630 Query 118706 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 118765 || || || || |||| ||| || |||| | ||||| | |||||| | || Sbjct 265629 AACTGCAATCGAGGCCAAATTGCAAACAGCAATTTCATCGGGGCTCGAGTACTCCACGAT 265570 Query 118766 TTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 118825 || ||||||||||| | || || || ||||||||||| ||||| || || ||| Sbjct 265569 CTCAGTGCACAAGTTGCTGCATTTTATCGTTCCCAAGTTCTTCTGATTGGATTTCCGGTT 265510 Query 118826 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 118885 || || || ||||| |||||||| || ||||| ||||| ||| ||| | ||||| || Sbjct 265509 GCATGCGTCTTTGTACAGCATGTAGGGGGTCCCAGTCTCGACTTGTGACATAAGAATTGC 265450 Query 118886 CTTCCAGACATCGGCAGCTGGCACAGTGGCG-TTGGCTCGCCCCTCTTCCTCGTACTTTG 118944 |||||| ||| ||| ||| || || ||| || |||| | |||||| ||| Sbjct 265449 AGTCCAGAGATCACGAGCCTTCAC-CTGACGCTTGAAACGAGCCTCGTTCTCGTATTTTA 265391 Query 118945 TGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGC 119004 |||||| ||||||||||||||| | || | || ||||| || | |||| Sbjct 265390 CGTAGAGATTCTCAAACTCTTCACCCCAAGAGTCACAAAGGCCTGGACACTCGTGGGGGC 265331 Query 119005 AGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGA 119064 | | ||| ||| |||| || || || || |||||||| || || || ||||||| Sbjct 265330 ACATCAGACTCCACATACCATCCGCCAGGACTCGTTTCATGAATAGATCAGGAATCCAGA 265271 Query 119065 GCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCC------CTGATTGAGACGCA 119118 | || |||| || || || | | ||| || | || || |||||| Sbjct 265270 GTGCGTAGAACAGCTCACGCGCTCTATATTCCTCCTTTCCTGTGTTCTTCTTGAGA---- 265215 Query 119119 ACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCT 119178 || | || || | ||| || |||||||| || || || || | || | || || Sbjct 265214 --TCGAGAACATCAAAGATGTCAGCGTGCCAGGGCTCGAGATAAATGGCAAATGCGCC-- 265159 Query 119179 TACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCA 119232 | |||| ||| |||| | || || | || ||| || | |||||||||| Sbjct 265158 -AGGACGTTTGTTTCCACCCTGATCAACGTAACGTGCTGTGTTATTGTAAACACGAAGCA 265100 Query 119233 TTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGA 119292 | || | | |||| |||| ||||| || || ||| || | | |||||||||| Sbjct 265099 TGGGTACAAGCCCATTGGATACACCATTGGTACCAGCAATTCGTGTCCCCTTGGCTCTGA 265040 Query 119293 CATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGA 119352 | ||| | | || |||||||| || || |||| || | || ||| | ||| Sbjct 265039 TACAGTGAACATTCACTCCAATACCACCAGCTGACTTGCTGACAAGTGCACACCTCTTGA 264980 Query 119353 GACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACA 119412 | || ||||||| |||||||| ||| | | ||| | ||||| ||||| |||| Sbjct 264979 GGGTGTCGTAGATGCCATCGATGCTGTCCTCAGTCATTGTTAGAAGGAAACAGCTGGACA 264920 Query 119413 TTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT- 119471 | || | | || | || |||||| ||||||| ||||| |||| || || Sbjct 264919 TCTGTTGTATACAAGTGCAGGCTGAGAAGAGGGTTGGTGATGCGTGAGTGAA-GTATCTC 264861 Query 119472 TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATC 119531 | ||||| | || ||| ||||| | ||| || || || ||| |||| || || | Sbjct 264860 TCGGACAGATAGTTGTATGTCTCAATGACCCTGGCGATATCCTCCTCGTGTATTCCCACA 264801 Query 119532 GAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGG 119591 | || | ||| | ||||| || | || | | | |||| || |||| | ||| Sbjct 264800 GCCACTCTCATCAGCATGTGGGCAGGCCTCTCAACGACTTTGCCATTGATCCTCAGCAGG 264741 Query 119592 TAACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623 |||||| |||| | |||||||| ||||| || Sbjct 264740 TAACTCCTCTCAAGGGTCTTGAAGCCAAAGTA 264709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618427144881520