Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq109 206 3e-48 seq113 190 2e-43 >seq109 Length=386716 Score = 206 bits (228), Expect = 3e-48 Identities = 937/1463 (64%), Gaps = 37/1463 (3%) Strand=Plus/Plus Query 104155 TTATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGT---GTC-T 104210 ||| ||||| |||| |||||||||| ||| || || | || || |||| ||| | Sbjct 264708 TTACTTTGGCTTCAAGACCCTTGAGAGGAGTTACCTGCTGAGGATCAATGGCAAAGTCGT 264767 Query 104211 TGATGGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACA 104270 ||| || || | ||||| | ||| | ||||| | || || || | ||| || | Sbjct 264768 TGA--GAGGCCTGCCC--ACATGCTGATGAGAGTGGCTGTGGGAATACACGAGGAGGATA 264823 Query 104271 TTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACA 104329 | | ||| | ||||||||| || | ||||| | || || |||| ||||||| || Sbjct 264824 TCGCCAGGGTCATTGAGACATACAACTATCTGTCCGAGAGATAC-TTCACTCACGCATCA 264882 Query 104330 CCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCC 104389 |||||||||||| || | || | || || |||||||| || |||||| | | Sbjct 264883 CCAACCCTCTTCTCAGCCTGCACTTGTATACAACAGATGTCCAGCTGTTTCCTTCTAACA 264942 Query 104390 AACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCA 104449 | | |||||| ||| | || ||||| | || || | | |||||| | || Sbjct 264943 ATGACTGAGGACAGCATCGATGGCATCTACGACACCCTCAAGAGGTGTGCACTTGTCAGC 265002 Query 104450 AAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATT 104509 |||| ||||| |||||||| || | | || | | |||||||| | || ||| Sbjct 265003 AAGTCAGCTGGTGGTATTGGAGTGAATGTTCACTGTATCAGAGCCAAGGGGACACGAATT 265062 Query 104510 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 104569 || || |||||| ||| |||| || | || |||||||| || | || |||| Sbjct 265063 GCTGGTACCAATGGTGTATCCAATGGGCTTGTACCCATGCTTCGTGTTTACAATAACACA 265122 Query 104570 GCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGA 104625 || || || || |||| | ||| | || | || | | || | ||||| || Sbjct 265123 GCACGTTACGTTGATCAGGGTGGAAA-CAAACGTCCTGGCGCATTTGCCATTTATCTCGA 265181 Query 104626 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGA 104685 ||| |||||||| || ||| | || | || || | ||| ||| | ||||| Sbjct 265182 GCCCTGGCACGCTGACATCTTTGATGTTCTCGATCTCAAGAAGAACACAGGAAAGGAGGA 265241 Query 104686 G----GCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGA 104741 | ||| || || || |||| ||| ||||||||||| ||||| |||||||| Sbjct 265242 ATATAGAGCG----CGTGAGCTGTTCTACGCACTCTGGATTCCTGATCTATTCATGAAAC 265297 Query 104742 GAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCG 104801 |||| || | ||| | ||| ||| | || || || || || || || | | Sbjct 265298 GAGTCCTGGCGGATGGTATGTGGAGTCTGATGTGCCCCCACGAGTGTCCAGGCCTTTGTG 265357 Query 104802 ATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGA 104861 | | |||||| |||||||| || ||| ||| |||||| | || | ||| | Sbjct 265358 ACTCTTGGGGTGAAGAGTTTGAGAATCTCTACGTAAAATACGAGAACGAGGCTCGTTTCA 265417 Query 104862 CTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACT 104920 ||| | |||| ||| ||| | |||| || ||||| | ||| ||| ||||||| Sbjct 265418 A-GCGTCAGGTGAAGGCTCGTGATCTCTGGACTGCAATTCTTATGTCACAAGTCGAGACT 265476 Query 104921 GGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTG 104980 || || || |||||||| ||||||||||| || |||| || ||||| ||||| ||| Sbjct 265477 GGGACCCCCTACATGCTGTACAAAGACGCATGCAACCGGAAATCCAATCAGAAGAACTTG 265536 Query 104981 GGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAG 105040 || ||| || | ||| | || || || ||| |||| | | | ||||| Sbjct 265537 GGAACGATAAAATGCAGCAACTTGTGCACTGAGATCGTGGAGTACTCGAGCCCCGATGAA 265596 Query 105041 ACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG 105100 | ||||| || || | || || || || | || || |||||||||| || ||| Sbjct 265597 ATTGCTGTTTGCAATTTGGCCTCGATTGCAGTTAACATGTTCGTGGATCCAGTGAAAAAA 265656 Query 105101 ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160 || | || | | | || || | ||| ||| ||| |||| |||||| ||||| Sbjct 265657 ACTTACGACTTTAAGAAGCTGAAGACAGTCGTCAAAGTTGTTACCAGAAACCTCGACAGA 265716 Query 105161 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCT--AATATGAGACACC 105218 || || || ||| |||||| ||||| | | | || ||| || ||||||||| Sbjct 265717 GTGATCGACGTCAATCATTACCCACTTGAG-CAG-GCAAAAGTCTCCAACGTGAGACACC 265774 Query 105219 GTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCAT 105278 |||| || || | || ||||||||||| || |||| ||| | || || | ||| Sbjct 265775 GTCCCATGGGAATTGGAGTTCAGGGTCTGGCAGATGCATTTCTACTGATGCGTTATCCAT 265834 Query 105279 TTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCG 105338 | || ||| || || || || ||||| | || || |||||| ||||| ||| | Sbjct 265835 TCGACAGCGATGACGCCCAGAAACTCAATATCCAGATCTTCGAGACCCTGTATTACGGTG 265894 Query 105339 CTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 105398 | || ||||| | ||| | || ||| | || | || || || | | || | Sbjct 265895 CACTCGAGGCCTCATGCGAGCTCGCCCAGGAGAAGGGCACCTACGAGACGTACAAAGGCT 265954 Query 105399 CTCCAGCTTCA--CAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA-GCTTC 105455 | |||| ||| || || | || || | || ||||||| || | ||||| || Sbjct 265955 CACCAG--TCAGCCAGGGCATCCTCCAGTACGACATGTGGG-GTGTAACACCAACAAATC 266011 Query 105456 ACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515 || ||||||| |||||||| || | | ||| | | ||| ||||| Sbjct 266012 TCTGGGACTGGGCTAAACTCAAGGATAAAATTTCCAAACACGGTATCAGGAACTCTCTCC 266071 Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATGCTTT 105574 | |||| ||||||||||||||||| || || |||| ||||||| || || || | | Sbjct 266072 TACTGGCACCAATGCCAACAGCCTCAACAGCCCAAATTCTTGGG-AACAACGAGGCCATC 266130 Query 105575 GAACCCTACACGACGAACATCTA 105597 || |||||||| | || ||||| Sbjct 266131 GAGCCCTACACCAGCAATATCTA 266153 >seq113 Length=346302 Score = 190 bits (210), Expect = 2e-43 Identities = 1100/1742 (63%), Gaps = 51/1742 (3%) Strand=Plus/Minus Query 104229 ACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGA 104288 ||||| | ||| | ||||| | || || || | || ||||| || ||| | |||| Sbjct 258039 ACATGCTGATGAGAGTGGCTGTGGGAATACACGAAGAGGACATCGACAGGGTCATTGAGA 257980 Query 104289 CATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCT 104347 ||||| || | ||||| | || || |||| ||||||| |||||||||| ||| || Sbjct 257979 CATACAACTATCTGTCCGAGAGATAC-TTCACTCACGCATCACCAACCCTTTTCTCAGCC 257921 Query 104348 GGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 104407 | || |||| || |||||||| || || || | | | | || ||| || Sbjct 257920 TGCACTGGTAGACAACAGATGTCCAGCTGTTTTCTCCTGACAATGACTGACGACAGCATT 257861 Query 104408 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 104467 || || ||||| | || || | | |||||| | ||| || | ||||| || ||| Sbjct 257860 AATGGCATCTACGACACCCTCAAGAGGTGTGCACTCATCAGCAAATCAGCTGGTGGAATT 257801 Query 104468 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 104527 || || | | || | | |||||||| | || ||| || || |||||| | Sbjct 257800 GGAGTGAATGTACACTGTATCAGAGCCAAGGGGACACGAATTGCTGGTACCAATGGTATA 257741 Query 104528 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 104587 || |||| || | || |||||||| || | || |||||| || ||||| |||| Sbjct 257740 TCCAATGGGCTTGTACCCATGCTTCGTGTTTACAATAACACAGCACGTTATGTTGATCAG 257681 Query 104588 GCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATAT 104643 | ||| | || | ||| | | || | ||||| ||||| |||||||| || || Sbjct 257680 GGTGGAAA-CAAACGTCCTGGAGCATTTGCCATTTATCTCGAGCCCTGGCACGCTGACAT 257622 Query 104644 CATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCT 104703 | || | || || | ||| ||| | ||||| || || || || Sbjct 257621 ATTCGATGTTCTCGATCTCAAGAAAAACACAGGAAAAGAGGAATATCGAGCACGTGAACT 257562 Query 104704 CTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT-- 104761 || | ||| |||||||| || ||| | |||||||| | ||| || | | | || Sbjct 257561 TTTTTACGCACTCTGGATCCCGGATTTATTCATGAAACGTGTTCTGGCG---GACGATGT 257505 Query 104762 -TGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTT 104820 ||| ||| | || || || | || || || | || || ||||||||| || Sbjct 257504 GTGGAGTCTGATGTGCCCCCACGAATGTCCAGGCCTATGTGACACCTGGGGTGAGGAATT 257445 Query 104821 TGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGAC-GGTGCCAGCTG 104879 || || |||||| ||||||||| ||| | || | ||| | |||| |||| Sbjct 257444 CGAGAAGCTCTACACACAGTACGAGGGAGAGGCCCGTTTCAA-GCGTCAGGTGAAAGCTC 257386 Query 104880 CCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTT 104939 || | |||| || ||||| | ||| ||| ||||||||| || || |||||||| | Sbjct 257385 GTGAGCTCTGGACTGCAATTCTTATGTCACAAGTCGAGACTGGAACTCCCTACATGCTGT 257326 Query 104940 ACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCA 104999 |||| ||||| || || ||| ||||| ||||| ||||| ||| || | || Sbjct 257325 ACAAGGACGCATGCAATAGAAAATCCAATCAGAAGAACTTGGGAACGATAAAATGCAGCA 257266 Query 105000 ATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCG 105059 | | ||||| || ||| | || | | | ||||| ||||| || || | | Sbjct 257265 ACTTGTGTACTGAGATCGTCGAGTACTCGAGCCCCGATGAAGTTGCTGTTTGCAATTTGG 257206 Query 105060 CATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAAC 105119 | || || || || || || ||||| |||| || |||||| | | | | | || | Sbjct 257205 CCTCGATTGCAGTCAACATGTTCGTGGACCCAGTGAAAAAGACTTACAACTTTAACAAGC 257146 Query 105120 TCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTT 105179 | | ||| |||| ||| | | ||| || |||||||||| ||| |||| || Sbjct 257145 TGAAGACAGTCGTCAAAATCGTCGCAAGAAATCTCGACAGAGTTATCGATGTCAATTATT 257086 Query 105180 ACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTC 105239 |||| | ||| || | || || |||||||| ||||| || || | || |||| Sbjct 257085 ACCCAATCGAGGAGGCAAGAGTCTCCAACATGAGACATCGTCCCATGGGAATTGGAGTTC 257026 Query 105240 AGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGG 105299 ||||||| || |||| ||| | || || | |||| || | | || || || Sbjct 257025 AGGGTCTGGCAGATGCATTTCTACTGATGCGTTATCCATTCGACAGCAATGAGGCCCAGA 256966 Query 105300 AAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGT 105359 || ||||| | || || |||||| ||||| | | || || ||||| | ||| Sbjct 256965 AACTCAATATCCAGATCTTCGAGACCCTGTATTATGGTGCCCTCGAGGCCTCATGCGAGC 256906 Query 105360 TGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA--CAAGGGGT 105417 | || ||| | || | || || || | | || || |||| ||| || || | Sbjct 256905 TCGCCCAGGAGAAGGGCACCTACGAGACGTACAAAGGCTCACCAG--TCAGCCAGGGCAT 256848 Query 105418 GCTTCAATTTGATATGTGGGAAGGTGAGACCAA-GCTTCACTACGACTGGGAAGCTCTCA 105476 || || | ||| ||||||| || | ||||| || || ||||||| | |||| Sbjct 256847 CCTCCAGTATGACATGTGGG-GTGTAACACCAACAAATCTCTGGGACTGGGCTGAACTCA 256789 Query 105477 AGG--AACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAAC 105534 ||| || ||| | | | ||| || | ||| |||||| |||| ||||||||||| Sbjct 256788 AGGATAAAATATCTA--AACACGGTATTAGGAACTCTCTCCTACTGGCACCAATGCCAAC 256731 Query 105535 AGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACAT 105594 |||||| || || ||||| ||||||| || || | |||| || ||||| | ||||| Sbjct 256730 AGCCTCAACAGCCCAAATTCTGGGTAACAACGAGGCCATTGAGCCTTACACCAGCAACAT 256671 Query 105595 CTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGA 105654 ||| ||| | || | || || || | ||||| ||||| || | || Sbjct 256670 CTACGCGAGGCGTGTACTGTCTGGTGAATTCCAAGTAGTCAATCCCCATCTGCTGAAGGA 256611 Query 105655 CCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGG--- 105711 ||||| ||| || ||||||| | | || |||||| | | | | | |||| | Sbjct 256610 CCTCACCGAGCGTGATCTCTGGGACGACGACATGAAGAA---CCAGATAATAGCGAGCAA 256554 Query 105712 TGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCGCACAGT 105771 ||| || || || || || | | || ||| || | ||| ||||| | ||||| Sbjct 256553 TGGCTCGATCCAGAACATCGACAACATCCCAGCAGACCTCAAGGCACTGTACAGAACAGT 256494 Query 105772 TTGGGAAAT---CAAGATGAAGGATG-TCATTGACATGGCCGCAGATCGTGGTCGCTTCA 105827 |||||||| | || |||||| || | | ||||| || |||||||| ||||| Sbjct 256493 CTGGGAAATTCCCCAG----AGGATGATCCTCAAGATGGCTGCTGATCGTGGGGCCTTCA 256438 Query 105828 TTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGATGTCC----AAGC 105881 | || | |||| ||| | ||| | |||| || |||||| ||| |||| Sbjct 256437 TCGACC--AGTCCCAGTCCACCAATGTTCATATGGCAAATCCAAC----TCCCGAGAAGC 256384 Query 105882 TCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCC 105941 || | || ||||| | | | | ||| || || || || || || ||||| |||||| Sbjct 256383 TCACATCCATGCATTTCTTCGGATGGGAGTCTGGCCTGAAGACTGGAATGTACTACCTCA 256324 Query 105942 GA 105943 || Sbjct 256323 GA 256322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583253203028080