Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1 114 1e-20 >seq1 Length=5503185 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34520 AACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATG 34579 |||||||| || | |||||| | || || || ||||| || || |||| ||| Sbjct 1252123 AACCCTGACGATCGCAGGATCATTATCTGTGCATGGAATCCAGCCGACATCCCCAAAATG 1252182 Query 34580 GCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGC 34639 || || || ||||| || |||| || |||| ||| || ||||||||||| ||||| Sbjct 1252183 GCTCTGCCACCGTGTCATTGCCTCGTGCAGTTCTTCGTAGCCAATGGGGAGCTCTCCTGT 1252242 Query 34640 CAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTAC 34699 || |||||||||||| | ||||||||| | || ||||| ||||||||||| ||| Sbjct 1252243 CATCTCTATCAACGAAGTGCAGACATGGGCCTCGGAGTGCCTTTCAACATTGCCTCCTAC 1252302 Query 34700 GCTCTGCTCACGTACATGATCGCTCA 34725 | || | ||||||||| | ||||| Sbjct 1252303 TCATTGTTGACGTACATGCTGGCTCA 1252328 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 ||||| | ||||||||| | || | ||| ||||||||||| ||||| || | ||| Sbjct 1252328 TGAGCCAGCATGTACGTCAACAATGAGTAGGAGGCAATGTTGAAAGGCACTCCGAGGCCC 1252269 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 |||||| | |||||||||||| || ||||| ||||||||||| || ||| |||| || Sbjct 1252268 ATGTCTGCACTTCGTTGATAGAGATGACAGGAGAGCTCCCCATTGGCTACGAAGAACTGC 1252209 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCAC 6799 |||| || ||||| || || ||||| |||| || || ||||| || || Sbjct 1252208 ACGAGGCAATGACACGGTGGCAGAGCCATTTTGGGGATGTCGGCTGGATTCCATGCACAG 1252149 Query 6800 ATCACGATCCTTCTGTCATCAGGGTT 6825 || | |||||| | || |||||||| Sbjct 1252148 ATAATGATCCTGCGATCGTCAGGGTT 1252123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448256561382240