Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq37 181 2e-40 seq425 163 7e-35 seq17 158 3e-33 seq7 143 6e-29 >seq37 Length=1171872 Score = 181 bits (200), Expect = 2e-40 Identities = 174/223 (78%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | |||||| | ||||||||| || || ||||| || || ||||| | ||| || Sbjct 188885 ACGAAGACGTAGGACCAAGTGAAGAGTAGATTCCTTTTGAATATTGTAATCTGAAAGAGT 188826 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 |||||||| |||| || || || ||||||||||| ||||| ||||| ||||||| ||| Sbjct 188825 TCTTCCATCCTCCAATTGTTTACCAGCGAAGATAAGACGTTGCTGGTCTGGAGGAATTCC 188766 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 || |||||||||||||| || || ||||| ||||||||||| || ||||| || Sbjct 188765 CTCTTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCAGAAGCCTCGACCTCCAG 188706 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| || || || || ||||||||||| || | |||||| Sbjct 188705 GGTGATGGTTTTGCCAGTCAGAGTCTTTACGAATATTTGCATT 188663 Score = 178 bits (196), Expect = 3e-39 Identities = 161/203 (79%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || |||||||||||||| ||||| || || |||| ||| || |||||||| |||| || Sbjct 189322 TGGAGAGTGGACTCTTTCTGGATATTGTAGTCCGAAAGAGTTCTTCCATCCTCCAATTGT 189263 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || |||||||| | || || ||||| || |||| ||||| |||||||| ||||| Sbjct 189262 TTACCAGCGAAGATCAAACGCTGCTGGTCTGGTGGAATGCCTTCTTTGTCCTGTATCTTG 189203 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| || ||||| || ||||||||| |||||| ||||| |||||||||||||| || Sbjct 189202 GCTTTGACATTTTCAATTGTGTCAGAGGCTTCAACTTCGAGGGTGATCGTCTTTCCTGTA 189143 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 || |||||||| || | |||||| Sbjct 189142 AGTGTCTTTACGAATATCTGCAT 189120 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| || || |||||||| ||||| || || | || || || ||||| Sbjct 189559 AGAACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGAGAGAGTTCTGCCATCC 189500 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| || || || |||||||| | ||||| || |||||||| | || ||||| ||| Sbjct 189499 TCCAGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGAGGGATGCCCTCCTTATCC 189440 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || ||||| || || |||||| || || || || ||||| ||| Sbjct 189439 TGGATCTTGGCCTTGACATTTTCAATAGTATCAGAGGCCTCTACTTCAAGTGTGATGGTC 189380 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| || |||||||| ||||| | ||||||| Sbjct 189379 TTTCCAGTCAGAGTCTTGACAAAAATCTGCATT 189347 Score = 149 bits (164), Expect = 1e-30 Identities = 132/165 (80%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||| || | ||||||||| || || ||||| ||||| ||||| | ||| || Sbjct 188657 ACGAAGACGTAGAACCAAGTGAAGAGTCGATTCCTTTTGAATGTTGTAATCTGAAAGAGT 188598 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 || ||||| || |||||||| || ||||||||||| ||||| ||||| ||||||| ||| Sbjct 188597 TCTGCCATCCTCAAGCTGCTTACCAGCGAAGATAAGACGTTGCTGGTCTGGAGGAATTCC 188538 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGA 211057 || |||||||||||||| || || ||||| ||||| ||||| Sbjct 188537 CTCTTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTATCAGA 188493 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || ||||| || ||||| |||||||| || || ||||| | ||| || Sbjct 189112 CGAAGACGGAGAACGAGGTGGAGGGTGGATTCTTTTTGAATATTGTAATCGGAAAGAGTT 189053 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 |||||||| |||| || || || || ||||| | || ||||| || || || | ||| Sbjct 189052 CTTCCATCCTCCAATTGTTTACCGGCAAAGATCAAACGCTGTTGATCTGGTGGGATACCT 188993 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || || || || ||||| ||| || ||||||||||||||||| |||||||| || Sbjct 188992 TCTTTATCTTGAATCTTAGCTTTAACATTTTCGATGGTGTCAGATGCCTCAACCTCCAGT 188933 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || || || || ||||||||||| || | |||||| Sbjct 188932 GTAATGGTTTTGCCAGTCAGAGTCTTTACGAATATTTGCATT 188891 >seq425 Length=33725 Score = 163 bits (180), Expect = 7e-35 Identities = 171/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| | ||| || || | |||||| || || || || || ||||| ||||| | || || Sbjct 29700 ACGTAATCTCAGTACCAAGTGAAGTGTTGATTCCTTCTGAATGTTGTAATCAGAGAGAGT 29759 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||||||| |||||||| || |||||||| || | |||||||| || |||| ||| Sbjct 29760 GCGTCCATCTTCGAGCTGCTTACCAGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATTCC 29819 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||||||||| || ||| || |||||||| ||||| || || |||||||| Sbjct 29820 CTCCTTGTCCTGGATTTTGGCTTTGACATTTTCGATTGTGTCGGAAGCCTCTACCTCGAG 29879 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || ||||| || || || ||||| | |||||| || Sbjct 29880 GGTGATGGTTTTCCCCGTTAGGGTTTTAACAAAGATCTGCATGTT 29924 >seq17 Length=1605837 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | |||||||||||| || || |||||||| ||||| | || || | ||| || Sbjct 82967 AGGACTAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGAGAGTGTGCGTCCGTCC 83026 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || |||||||| | | || ||||| || |||| || ||||||||| Sbjct 83027 TCCAGCTGTTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAATCCCCTCCTTGTCC 83086 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || ||||||||||||||||| || || ||||| || ||||| || Sbjct 83087 TGGATTTTAGCCTTGACGTTTTCGATGGTGTCTGAAGCCTCGACCTCAAGGGTGATGGTT 83146 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||||||||| || || | |||||| Sbjct 83147 TTCCCTGTGAGAGTCTTGACGAAGATCTGCAT 83178 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | |||||||||||| || || |||||||| ||||| | || || | ||| || Sbjct 83324 AGGACTAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGAGAGTGTGCGTCCGTCC 83383 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || |||||||| | | || ||||| || |||| || ||||||||| Sbjct 83384 TCCAGCTGTTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAATCCCCTCCTTGTCC 83443 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || ||||||||||||||||| || || ||||| || ||||| || Sbjct 83444 TGGATTTTAGCCTTGACGTTTTCGATGGTGTCTGAAGCCTCGACCTCAAGGGTGATGGTT 83503 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||||||||| || || | |||||| Sbjct 83504 TTCCCTGTGAGAGTCTTGACGAAGATCTGCAT 83535 Score = 154 bits (170), Expect = 3e-32 Identities = 169/225 (75%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||||| ||||| | ||| || || ||||| || |||||||| ||||| | ||| Sbjct 83539 TCCACGAAGTCGAAGGACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCAGAAAG 83598 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | ||| || |||||||| || || |||||||| | | || ||||| || |||| Sbjct 83599 AGTGCGTCCGTCCTCCAGCTGTTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAAT 83658 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||| || ||||||||||| || || || |||||||||||||| || || ||||| Sbjct 83659 TCCCTCTTTGTCCTGGATTTTAGCCTTGACATTTTCGATGGTGTCTGACGCCTCGACCTC 83718 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || || ||||| ||||| || || | |||||| Sbjct 83719 AAGGGTGATGGTTTTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 83763 Score = 154 bits (170), Expect = 3e-32 Identities = 169/225 (75%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||||| ||||| | |||||||| ||||| || |||||||| ||||| | || Sbjct 83995 TCCACGAAGTCGAAGGACCAAATGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGAGAG 84054 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | |||||||||| ||||| || |||||||| | | || ||||| || |||| Sbjct 84055 TGTGCGACCATCTTCCAATTGCTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAAT 84114 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||| |||||||||||||| || || || |||||||||||||| || || ||||| Sbjct 84115 TCCCTCCTTGTCCTGGATTTTAGCCTTGACATTTTCGATGGTGTCTGACGCCTCGACCTC 84174 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || || ||||| ||||| || || | |||||| Sbjct 84175 AAGGGTAATGGTTTTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 84219 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||||| ||||| | ||||| || ||||| || ||||| |||||||| | ||| Sbjct 84223 TCCACGAAGTCGAAGGACCAAATGAAGGGTAGACTCCTTCTGGATATTATAATCAGAAAG 84282 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | ||| || |||||||| || || |||||||| | | || ||||| || |||| Sbjct 84283 AGTGCGTCCGTCCTCCAGCTGTTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAAT 84342 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||| |||||||||||||| || || ||||| || || || || || |||||||| Sbjct 84343 TCCCTCCTTGTCCTGGATTTTAGCCTTGACGTTCTCAATAGTATCCGAAGCCTCAACCTC 84402 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| ||||| ||||| || || || || || | ||||||||| Sbjct 84403 TAGGGTGATGGTCTTGCCCGTCAGTGTTTTCACGAATATCTGCATTTT 84450 Score = 140 bits (154), Expect = 8e-28 Identities = 166/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||||| ||||| | ||||| || ||||| || ||||| || ||||| | ||| Sbjct 83767 TCCACGAAGTCGAAGGACCAAATGAAGGGTAGACTCCTTCTGGATATTGTAATCAGAAAG 83826 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | ||| || |||||||| || || ||||| || | | || ||||| || |||| Sbjct 83827 AGTGCGTCCGTCCTCCAGCTGTTTTCCAGCGAAAATCAATCTCTGCTGGTCTGGGGGAAT 83886 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||| |||||||||||||| || || ||||| || || ||||| || || ||||| Sbjct 83887 TCCCTCCTTGTCCTGGATTTTAGCCTTGACGTTCTCAATAGTGTCTGACGCCTCGACCTC 83946 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || || ||||||||||| || || | |||||| Sbjct 83947 AAGGGTAATGGTTTTCCCTGTGAGAGTCTTGACGAAGATCTGCAT 83991 >seq7 Length=2059422 Score = 143 bits (158), Expect = 6e-29 Identities = 145/189 (77%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 ||||||||||| ||||| | || || | ||||| || || || || || ||||| || Sbjct 739754 TTTTGGATGTTGTAATCAGAGAGAGTACGCCCATCCTCGAGTTGTTTCCCAGCGAAAATC 739813 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | || |||||||| ||||||| ||| || || ||||| ||||| ||| || |||||| Sbjct 739814 AATCGCTGTTGGTCTGGAGGAATTCCCTCTTTATCCTGAATCTTGGCTTTGACATTTTCG 739873 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106 ||||| ||||| |||||||| || ||||| ||||||||||| | |||||| || || Sbjct 739874 ATGGTATCAGAAGGCTCAACCTCAAGGGTGATAGTCTTTCCCGTCAAAGTCTTGACGAAA 739933 Query 211107 ACCTGCATT 211115 | ||||||| Sbjct 739934 ATCTGCATT 739942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159136524596330