Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq17 100 2e-16 >seq17 Length=1605837 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||||||| || || ||| || || ||||||||||| | ||| || ||| |||| || Sbjct 84239 ACCAAATGAAGGGTAGACTCCTTCTGGATATTATAATCAGAAAGAGTGCGTCCGTCCTCC 84298 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 |||||||| || || || || | | ||||||||| | ||| | | ||| |||||| | Sbjct 84299 AGCTGTTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGG 84358 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 ||||| |||| || | | ||||| | ||| || || | ||||| | || Sbjct 84359 ATTTTAGCCTTGACGTTCTCAATAGTATCCGAAGCCTCAACCTCTAGGGTGATGGTCTTG 84418 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCATCTTT 39288 |||||||| ||||| || || || ||||| ||| Sbjct 84419 CCCGTCAGTGTTTTCACGAATATCTGCATTTTT 84451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429540145039346