Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 3e-14 >seq1 Length=5503185 Score = 93.3 bits (102), Expect = 3e-14 Identities = 151/216 (70%), Gaps = 1/216 (0%) Strand=Plus/Minus Query 30020 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30079 |||||||||||||| || || | ||| ||||| || ||||| || | | || ||||| Sbjct 1251967 TGCCTCCACTGGAAGCCATAGATCGGCCCCAGATCCCCCTCCTCACGATCCTTAAAGCCA 1251908 Query 30080 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAG 30139 || | | | | |||| ||||| |||||||| || || ||| ||| || Sbjct 1251907 TATGCATCGAGATATATACGAGAACTATTGGCATCCCAGATTTTAACTCCCCTCTTCGAC 1251848 Query 30140 AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTC 30199 || |||| || || ||||| || |||| |||||| || || ||||| || || ||||| Sbjct 1251847 AGGTCTTGGGCATTCGTGGATCCACTGATGAACCAGAGAAGTTCCTCGACTACTCCCTTC 1251788 Query 30200 CAAAAGACCCTCTTGGTCGTGAGGAG-GGGAAACTG 30234 |||||||| || || || || || |||||| || Sbjct 1251787 CAAAAGACGTCTTTTGTGGTCAGCAGTGGGAAAATG 1251752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406158041981212