Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq17 143 6e-29 seq37 123 6e-23 seq425 120 7e-22 seq7 111 4e-19 >seq17 Length=1605837 Score = 143 bits (158), Expect = 6e-29 Identities = 165/220 (75%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| ||||| | ||||||||| ||||| || |||||||||||||| | | || | Sbjct 84002 AGTCGAAGGACCAAATGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGAGAGTGTGCGA 84061 Query 151947 CCATCTTCTA--GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 |||||||| | ||||| || |||||||| | ||||||||||| | | ||||| | Sbjct 84062 CCATCTTCCAATTGCTTT--CCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAATTCCCT 84119 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064 |||| || || ||||| |||||| | || | | ||||||| ||| || ||||| | Sbjct 84120 CCTTGTCCTGGATTTTAGCCTTGACATTTTCGATGGTGTCTGACGCCTCGACCTCAAGGG 84179 Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| ||||| || ||||| ||||| ||||||| |||||| Sbjct 84180 TAATGGTTTTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 84219 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| ||||| | |||||| |||||||| || ||||| |||||||| | | ||| | Sbjct 83774 AGTCGAAGGACCAAATGAAGGGTAGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGT 83833 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 || || || || ||| || ||||| || | ||||||||||| | | ||||| ||| Sbjct 83834 CCGTCCTCCAGCTGTTTTCCAGCGAAAATCAATCTCTGCTGGTCTGGGGGAATTCCCTCC 83893 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || ||||| ||||| |||| | ||||||| ||| || ||||| ||| Sbjct 83894 TTGTCCTGGATTTTAGCCTTGACGTTCTCAATAGTGTCTGACGCCTCGACCTCAAGGGTA 83953 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || ||||||||||| ||||||| |||||| Sbjct 83954 ATGGTTTTCCCTGTGAGAGTCTTGACGAAGATCTGCAT 83991 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | |||||||| || || || |||||||||||||| | | || | Sbjct 82960 GAGACGGAGGACTAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGAGAGTGTGCG 83019 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || ||| || |||||||| | ||||||||||| | | || || || Sbjct 83020 TCCGTCCTCCAGCTGTTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAATCCCCTC 83079 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || ||||| ||||| | || | | |||||||| ||| || ||||| || Sbjct 83080 CTTGTCCTGGATTTTAGCCTTGACGTTTTCGATGGTGTCTGAAGCCTCGACCTCAAGGGT 83139 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || ||||||||||| ||||||| |||||| Sbjct 83140 GATGGTTTTCCCTGTGAGAGTCTTGACGAAGATCTGCAT 83178 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | |||||||| || || || |||||||||||||| | | || | Sbjct 83317 GAGACGGAGGACTAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGAGAGTGTGCG 83376 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || ||| || |||||||| | ||||||||||| | | || || || Sbjct 83377 TCCGTCCTCCAGCTGTTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAATCCCCTC 83436 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || ||||| ||||| | || | | |||||||| ||| || ||||| || Sbjct 83437 CTTGTCCTGGATTTTAGCCTTGACGTTTTCGATGGTGTCTGAAGCCTCGACCTCAAGGGT 83496 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || ||||||||||| ||||||| |||||| Sbjct 83497 GATGGTTTTCCCTGTGAGAGTCTTGACGAAGATCTGCAT 83535 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| ||||| | || || |||||||| || |||||||||||||| | | ||| | Sbjct 83546 AGTCGAAGGACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGT 83605 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 || || || || ||| || |||||||| | ||||||||||| | | ||||| || Sbjct 83606 CCGTCCTCCAGCTGTTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAATTCCCTCT 83665 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || ||||| |||||| | || | | ||||||| ||| || ||||| || Sbjct 83666 TTGTCCTGGATTTTAGCCTTGACATTTTCGATGGTGTCTGACGCCTCGACCTCAAGGGTG 83725 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || ||||| ||||| ||||||| |||||| Sbjct 83726 ATGGTTTTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 83763 Score = 120 bits (132), Expect = 7e-22 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| ||||| | |||||| |||||||| || ||||| || ||||| | | ||| | Sbjct 84230 AGTCGAAGGACCAAATGAAGGGTAGACTCCTTCTGGATATTATAATCAGAAAGAGTGCGT 84289 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 || || || || ||| || |||||||| | ||||||||||| | | ||||| ||| Sbjct 84290 CCGTCCTCCAGCTGTTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAATTCCCTCC 84349 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || ||||| ||||| |||| | | || ||| ||| || || || || Sbjct 84350 TTGTCCTGGATTTTAGCCTTGACGTTCTCAATAGTATCCGAAGCCTCAACCTCTAGGGTG 84409 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110 || || |||||||| || || |||||||| | ||||||||| || Sbjct 84410 ATGGTCTTGCCCGTCAGTGTTTTCACGAATATCTGCATTTTTCC 84453 >seq37 Length=1171872 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | ||||||||||| || ||||| || |||||||| | | |||||| ||||| Sbjct 188875 AGGACCAAGTGAAGAGTAGATTCCTTTTGAATATTGTAATCTGAAAGAGTTCTTCCATCC 188816 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | ||| || ||||||||||| | |||||||| | | ||||| || || || Sbjct 188815 TCCAATTGTTTACCAGCGAAGATAAGACGTTGCTGGTCTGGAGGAATTCCCTCTTTGTCC 188756 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || |||||| | || | | |||| ||| ||| || || || || || ||| Sbjct 188755 TGGATCTTGGCCTTGACATTTTCAATGGTGTCAGAAGCCTCGACCTCCAGGGTGATGGTT 188696 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| || |||||||| ||||| | |||||| Sbjct 188695 TTGCCAGTCAGAGTCTTTACGAATATTTGCATT 188663 Score = 105 bits (116), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || || |||||||| |||||||| || | | |||||| ||||| || | Sbjct 189554 CAAG-TGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGAGAGAGTTCTGCCATCCTCCA 189496 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || |||||||| | | ||||| || | | ||| || ||||| || || | Sbjct 189495 GTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGAGGGATGCCCTCCTTATCCTGGA 189436 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | | || || |||||||||||| || || || || | Sbjct 189435 TCTTGGCCTTGACATTTTCAATAGTATCAGAGGCCTCTACTTCAAGTGTGATGGTCTTTC 189376 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTTACCC 152111 | || |||||||| || || | ||||||| |||| Sbjct 189375 CAGTCAGAGTCTTGACAAAAATCTGCATTCCACCC 189341 Score = 84.2 bits (92), Expect = 5e-11 Identities = 117/163 (72%), Gaps = 1/163 (1%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| || || ||||| ||||||||||| | | |||||| ||||| || | Sbjct 188642 CAAG-TGAAGAGTCGATTCCTTTTGAATGTTGTAATCTGAAAGAGTTCTGCCATCCTCAA 188584 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || ||||||||||| | |||||||| | | ||||| || || || || | Sbjct 188583 GCTGCTTACCAGCGAAGATAAGACGTTGCTGGTCTGGAGGAATTCCCTCTTTGTCCTGGA 188524 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTC 152059 | || |||||| | || | | | || ||| ||| ||||| Sbjct 188523 TCTTGGCCTTGACATTTTCAATGGTATCAGAAGCCTCGACTTC 188481 >seq425 Length=33725 Score = 120 bits (132), Expect = 7e-22 Identities = 154/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || || || || || ||||||||||| | | ||| | |||||||| | Sbjct 29715 CAAG-TGAAGTGTTGATTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGTCCATCTTCGA 29773 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || |||||||| |||||||| ||||| | | ||||| ||||| || || | Sbjct 29774 GCTGCTTACCAGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATTCCCTCCTTGTCCTGGA 29833 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||||||| | || | |||| ||| |||||| || || || || ||||| | Sbjct 29834 TTTTGGCTTTGACATTTTCGATTGTGTCGGAAGCCTCTACCTCGAGGGTGATGGTTTTCC 29893 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 |||| || || || || |||| |||||| || Sbjct 29894 CCGTTAGGGTTTTAACAAAGATCTGCATGTT 29924 >seq7 Length=2059422 Score = 111 bits (122), Expect = 4e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 ||||||||||||||||| | | ||| | |||||| || || |||||| ||||| || Sbjct 739754 TTTTGGATGTTGTAATCAGAGAGAGTACGCCCATCCTCGAGTTGTTTCCCAGCGAAAATC 739813 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 | | ||| ||||| | | ||||| || || || ||||| || ||||||| | || Sbjct 739814 AATCGCTGTTGGTCTGGAGGAATTCCCTCTTTATCCTGAATCTTGGCTTTGACATTTTCG 739873 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 | | | || ||| ||| || ||||| || ||||| || ||||| | |||||| ||||| Sbjct 739874 ATGGTATCAGAAGGCTCAACCTCAAGGGTGATAGTCTTTCCCGTCAAAGTCTTGACGAAA 739933 Query 152097 ACCTGCATT 152105 | ||||||| Sbjct 739934 ATCTGCATT 739942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153805395771182