Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq37 170 4e-37 seq17 167 5e-36 seq7 165 2e-35 seq425 147 5e-30 >seq37 Length=1171872 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | || ||||| |||| ||| | ||| ||||| ||||| |||||||| | | Sbjct 189346 CCACCCCTGAGACGAAGAACCAAATGGAGAGTGGACTCTTTCTGGATATTGTAGTCCGAA 189287 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | |||||||| | |||||| || || ||||||||||| || ||||| ||| Sbjct 189286 AGAGTTCTTCCATCCTCCAATTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGTGGA 189227 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || || ||||| || ||||| ||||| || | || || ||||| || ||||| ||| Sbjct 189226 ATGCCTTCTTTGTCCTGTATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCTTCAACT 189167 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| || || | ||||| |||||||||||||| Sbjct 189166 TCGAGGGTGATCGTCTTTCCTGTAAGTGTCTTTACGAATATCTGCAT 189120 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | || ||||| |||| || | || ||||||||| ||||||||||| | Sbjct 189574 CCACCTCTGAGACGAAGAACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGAG 189515 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | ||||||||| |||||||| || || |||||||||||||| || ||| || Sbjct 189514 AGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGAGGG 189455 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||| || |||||||| || || || | || ||||| || || || || ||| Sbjct 189454 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACATTTTCAATAGTATCAGAGGCCTCTACT 189395 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || ||||| ||||| || |||| |||||| || || ||||||||| Sbjct 189394 TCAAGTGTGATGGTCTTTCCAGTCAGAGTCTTGACAAAAATCTGCATT 189347 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || || || || || || | ||| ||||||||| || ||||| || | | Sbjct 189118 CCTCCTCGAAGACGGAGAACGAGGTGGAGGGTGGATTCTTTTTGAATATTGTAATCGGAA 189059 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | |||||||| | |||||| ||||||||||||||||| ||||| || || Sbjct 189058 AGAGTTCTTCCATCCTCCAATTGTTTACCGGCAAAGATCAAACGCTGTTGATCTGGTGGG 188999 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| || || ||||| ||||| ||||| || | ||||| ||||| || || || || Sbjct 188998 ATACCTTCTTTATCTTGAATCTTAGCTTTAACATTTTCGATGGTGTCAGATGCCTCAACC 188939 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || || || || || || |||| |||||| |||||||| |||||| Sbjct 188938 TCCAGTGTAATGGTTTTGCCAGTCAGAGTCTTTACGAATATTTGCATT 188891 >seq17 Length=1605837 Score = 167 bits (184), Expect = 5e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || ||||| |||| ||| | || || || ||||| || || |||| | Sbjct 84221 CCTCCACGAAGTCGAAGGACCAAATGAAGGGTAGACTCCTTCTGGATATTATAATCAGAA 84280 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| || ||||| || || |||||||| | || ||||| ||| Sbjct 84281 AGAGTGCGTCCGTCCTCCAGCTGTTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGA 84340 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| ||||| || || || ||| | || ||||| |||||||| || || Sbjct 84341 ATTCCCTCCTTGTCCTGGATTTTAGCCTTGACGTTCTCAATAGTATCCGAAGCCTCAACC 84400 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||| ||||| ||||||| || || ||||||||||||||||| Sbjct 84401 TCTAGGGTGATGGTCTTGCCCGTCAGTGTTTTCACGAATATCTGCATTTT 84450 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || || | || | ||| ||| || ||||||||||| |||| Sbjct 82952 CCCCCACGGAGACGGAGGACTAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGAG 83011 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| || ||||| || || |||||||| | || ||||| ||| Sbjct 83012 AGTGTGCGTCCGTCCTCCAGCTGTTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGA 83071 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| ||||| || || || ||| | ||||| ||||| ||||| ||||| Sbjct 83072 ATCCCCTCCTTGTCCTGGATTTTAGCCTTGACGTTTTCGATGGTGTCTGAAGCCTCGACC 83131 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| || || || || | |||||| ||||| |||||||| Sbjct 83132 TCAAGGGTGATGGTTTTCCCTGTGAGAGTCTTGACGAAGATCTGCAT 83178 Score = 156 bits (172), Expect = 9e-33 Identities = 169/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 282876 CCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGC 282935 ||||| || || || || | || | ||| ||| || ||||||||||| |||| || Sbjct 83312 CCACGGAGACGGAGGACTAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGAGAGT 83371 Query 282936 GTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATA 282995 ||||| || ||||| || ||||| || || |||||||| | || ||||| ||||| Sbjct 83372 GTGCGTCCGTCCTCCAGCTGTTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAATC 83431 Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| ||||| || || || ||| | ||||| ||||| ||||| ||||| || Sbjct 83432 CCCTCCTTGTCCTGGATTTTAGCCTTGACGTTTTCGATGGTGTCTGAAGCCTCGACCTCA 83491 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| || || || || | |||||| ||||| |||||||| Sbjct 83492 AGGGTGATGGTTTTCCCTGTGAGAGTCTTGACGAAGATCTGCAT 83535 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || ||||| |||| ||| | || || || ||||| ||||| |||| | Sbjct 83765 CCTCCACGAAGTCGAAGGACCAAATGAAGGGTAGACTCCTTCTGGATATTGTAATCAGAA 83824 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| || ||||| || || || ||||| | || ||||| ||| Sbjct 83825 AGAGTGCGTCCGTCCTCCAGCTGTTTTCCAGCGAAAATCAATCTCTGCTGGTCTGGGGGA 83884 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| ||||| || || || ||| | || |||||||| || || ||||| Sbjct 83885 ATTCCCTCCTTGTCCTGGATTTTAGCCTTGACGTTCTCAATAGTGTCTGACGCCTCGACC 83944 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || || || || || | |||||| ||||| |||||||| Sbjct 83945 TCAAGGGTAATGGTTTTCCCTGTGAGAGTCTTGACGAAGATCTGCAT 83991 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || ||||| |||| || | || || || ||||||||||| |||| | Sbjct 83537 CCTCCACGAAGTCGAAGGACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCAGAA 83596 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| || ||||| || || |||||||| | || ||||| ||| Sbjct 83597 AGAGTGCGTCCGTCCTCCAGCTGTTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGA 83656 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||| ||||| ||||| || || || || | ||||| ||||| || || ||||| Sbjct 83657 ATTCCCTCTTTGTCCTGGATTTTAGCCTTGACATTTTCGATGGTGTCTGACGCCTCGACC 83716 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| || || || || | ||||| ||||| |||||||| Sbjct 83717 TCAAGGGTGATGGTTTTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 83763 Score = 140 bits (154), Expect = 7e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || ||||| |||| ||| | || || || ||||||||||| |||| Sbjct 83993 CCTCCACGAAGTCGAAGGACCAAATGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGAG 84052 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| ||||| || | ||| || || || |||||||| | || ||||| ||| Sbjct 84053 AGTGTGCGACCATCTTCCAATTGCTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGA 84112 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| ||||| || || || || | ||||| ||||| || || ||||| Sbjct 84113 ATTCCCTCCTTGTCCTGGATTTTAGCCTTGACATTTTCGATGGTGTCTGACGCCTCGACC 84172 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || || || || || | ||||| ||||| |||||||| Sbjct 84173 TCAAGGGTAATGGTTTTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 84219 >seq7 Length=2059422 Score = 165 bits (182), Expect = 2e-35 Identities = 150/189 (79%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 |||||||||||||| |||| || || || |||||||| ||||||||||| || || ||| Sbjct 739754 TTTTGGATGTTGTAATCAGAGAGAGTACGCCCATCCTCGAGTTGTTTCCCAGCGAAAATC 739813 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 || || |||||||| ||||| ||||| || || || ||||| ||||| || | ||| Sbjct 739814 AATCGCTGTTGGTCTGGAGGAATTCCCTCTTTATCCTGAATCTTGGCTTTGACATTTTCG 739873 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAAT 283091 || || || |||| || || || || ||||| ||||| |||||||||||||| ||||| Sbjct 739874 ATGGTATCAGAAGGCTCAACCTCAAGGGTGATAGTCTTTCCCGTCAAAGTCTTGACGAAA 739933 Query 283092 ATCTGCATT 283100 ||||||||| Sbjct 739934 ATCTGCATT 739942 >seq425 Length=33725 Score = 147 bits (162), Expect = 5e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| | | ||||||| || | || ||| || || |||||||| |||| Sbjct 29694 ACCACCACGTAATCTCAGTACCAAGTGAAGTGTTGATTCCTTCTGAATGTTGTAATCAGA 29753 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| ||||| || || || || || || ||||||| | |||||||| || Sbjct 29754 GAGAGTGCGTCCATCTTCGAGCTGCTTACCAGCGAAGATCAGCCTCTGTTGGTCTGGGGG 29813 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| ||||| || ||||| || | ||||| ||||| ||||| || || Sbjct 29814 AATTCCCTCCTTGTCCTGGATTTTGGCTTTGACATTTTCGATTGTGTCGGAAGCCTCTAC 29873 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| ||||| || || ||||| | || ||||| || |||||||| || Sbjct 29874 CTCGAGGGTGATGGTTTTCCCCGTTAGGGTTTTAACAAAGATCTGCATGTT 29924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046725225377468