Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq17 118 8e-22 seq37 109 4e-19 seq425 91.5 1e-13 seq7 91.5 1e-13 >seq17 Length=1605837 Score = 118 bits (130), Expect = 8e-22 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 44134 GTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTG 44193 |||||| ||| ||||| |||||||||||||| | |||| ||| |||| |||||||| Sbjct 82975 GTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGAGAGTGTGCGTCCGTCCTCCAGCTG 83034 Query 44194 CTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTT 44253 || || || |||||||| | |||||| |||| || | || ||||| ||| || || Sbjct 83035 TTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTGGATTTT 83094 Query 44254 CTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGT 44313 ||| | || | |||||||| | | || ||||| | || || || || || || Sbjct 83095 AGCCTTGACGTTTTCGATGGTGTCTGAAGCCTCGACCTCAAGGGTGATGGTTTTCCCTGT 83154 Query 44314 GAGGGTCTTCACGAAGATTTGCATG 44338 ||| ||||| |||||||| |||||| Sbjct 83155 GAGAGTCTTGACGAAGATCTGCATG 83179 Score = 118 bits (130), Expect = 8e-22 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 44134 GTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTG 44193 |||||| ||| ||||| |||||||||||||| | |||| ||| |||| |||||||| Sbjct 83332 GTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGAGAGTGTGCGTCCGTCCTCCAGCTG 83391 Query 44194 CTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTT 44253 || || || |||||||| | |||||| |||| || | || ||||| ||| || || Sbjct 83392 TTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTGGATTTT 83451 Query 44254 CTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGT 44313 ||| | || | |||||||| | | || ||||| | || || || || || || Sbjct 83452 AGCCTTGACGTTTTCGATGGTGTCTGAAGCCTCGACCTCAAGGGTGATGGTTTTCCCTGT 83511 Query 44314 GAGGGTCTTCACGAAGATTTGCATG 44338 ||| ||||| |||||||| |||||| Sbjct 83512 GAGAGTCTTGACGAAGATCTGCATG 83536 Score = 118 bits (130), Expect = 8e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||||| || |||||| |||||||||||||| | |||| ||| | || ||| Sbjct 84011 ACCAAATGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGAGAGTGTGCGACCATCTTCC 84070 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | ||||| || || |||||||| | |||||| |||| || | || ||||| ||| Sbjct 84071 AATTGCTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGG 84130 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 || || ||| | || | |||||||| | | || ||||| | ||||| || || Sbjct 84131 ATTTTAGCCTTGACATTTTCGATGGTGTCTGACGCCTCGACCTCAAGGGTAATGGTTTTC 84190 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || ||||||||||| |||||||| |||||| Sbjct 84191 CCTGTGAGGGTCTTGACGAAGATCTGCATG 84220 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || || |||||| |||||||||||||| | || ||| |||| ||| Sbjct 83555 ACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGTCCGTCCTCC 83614 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| || || || |||||||| | |||||| |||| || | || || || ||| Sbjct 83615 AGCTGTTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAATTCCCTCTTTGTCCTGG 83674 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 || || ||| | || | |||||||| | | || ||||| | || || || || Sbjct 83675 ATTTTAGCCTTGACATTTTCGATGGTGTCTGACGCCTCGACCTCAAGGGTGATGGTTTTC 83734 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || ||||||||||| |||||||| |||||| Sbjct 83735 CCTGTGAGGGTCTTGACGAAGATCTGCATG 83764 >seq37 Length=1171872 Score = 109 bits (120), Expect = 4e-19 Identities = 154/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGT 44186 || ||||| || ||| || ||||| || |||||||||| ||||| | | || | Sbjct 189100 ACGAGGTGGAGGGTGGATTCTTTTTGAATATTGTAATCGGAAAGAGTT--CTTCCATCCT 189043 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 ||| || || |||||||||||||||||||| ||||||| || | |||||| || || Sbjct 189042 CCAATTGTTTACCGGCAAAGATCAAACGCTGTTGATCTGGTGGGATACCTTCTTTATCTT 188983 Query 44247 TTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| |||| || || | |||||||| | | || ||||||| ||||| || Sbjct 188982 GAATCTT-AGCTTTAACATTTTCGATGGTGTCAGATGCCTCAACCTCCAGTGTAATGGTT 188924 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || ||||| ||||| |||||||| Sbjct 188923 TTGCCAGTCAGAGTCTTTACGAATATTTGCAT 188892 Score = 96.9 bits (106), Expect = 2e-15 Identities = 163/234 (70%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || || || | | |||| || || ||| ||| || ||||| ||||| || Sbjct 189350 CATTCCACCCCTGAGACGAAGAACCAAATGGAGAGTGGACTCTTTCTGGATATTGTAGTC 189291 Query 44167 GGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||||| | | || |||| || || || || ||||||||||||||||| ||| Sbjct 189290 CGAAAGAGTT--CTTCCATCCTCCAATTGTTTACCAGCGAAGATCAAACGCTGCTGGTCT 189233 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | || | ||||| || ||| |||||| || | || | || ||||| | || | Sbjct 189232 GGTGGAATGCCTTCTTTGTCCTGTATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCT 189173 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || | || ||||||||||| || || ||||| ||||| || |||||| Sbjct 189172 TCAACTTCGAGGGTGATCGTCTTTCCTGTAAGTGTCTTTACGAATATCTGCATG 189119 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169 ||| ||||| || | | |||| |||||| || || ||||| |||||||| || | Sbjct 189575 TCCACCTCTGAGACGAAGAACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGA 189516 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 ||| | | || ||||| || || || || ||||||||||| |||||||| | ||| Sbjct 189515 GAGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGAGG 189456 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCAC 44289 | || ||||| ||| ||||| ||| | || | || || || | || || || Sbjct 189455 GATGCCCTCCTTATCCTGGATCTTGGCCTTGACATTTTCAATAGTATCAGAGGCCTCTAC 189396 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || | || || |||||||| || || ||||| || || || ||||| Sbjct 189395 TTCAAGTGTGATGGTCTTTCCAGTCAGAGTCTTGACAAAAATCTGCAT 189348 >seq425 Length=33725 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 44122 TCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTC 44181 ||||| |||| |||||| || ||||| || ||||||||||| | ||| ||| | Sbjct 29706 TCTCAGTACCAAGTGAAGTGTTGATTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGTCC 29765 Query 44182 GTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTT 44241 || || |||||||| || || ||||||| | ||| || |||| || | || ||||| Sbjct 29766 ATCTTCGAGCTGCTTACCAGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATTCCCTCCTT 29825 Query 44242 TTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAAT 44301 ||| || || || | || | || ||||||| | || ||||| | || || Sbjct 29826 GTCCTGGATTTTGGCTTTGACATTTTCGATTGTGTCGGAAGCCTCTACCTCGAGGGTGAT 29885 Query 44302 CGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || ||||| ||||| || || ||||| |||||| || Sbjct 29886 GGTTTTCCCCGTTAGGGTTTTAACAAAGATCTGCATGTTG 29925 >seq7 Length=2059422 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 ||||||||||||||||||| | ||| ||| | || || || || ||||| || || | Sbjct 739752 CCTTTTGGATGTTGTAATCAGAGAGAGTACGCCCATCCTCGAGTTGTTTCCCAGCGAAAA 739811 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 |||| ||||| || |||| ||| | || || || ||| ||||| || | || Sbjct 739812 TCAATCGCTGTTGGTCTGGAGGAATTCCCTCTTTATCCTGAATCTTGGCTTTGACATTTT 739871 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | ||||| || | | || ||||| | || || ||||||||||| | ||||| |||| Sbjct 739872 CGATGGTATCAGAAGGCTCAACCTCAAGGGTGATAGTCTTTCCCGTCAAAGTCTTGACGA 739931 Query 44328 AGATTTGCAT 44337 | || ||||| Sbjct 739932 AAATCTGCAT 739941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359985828346914