Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq425 123 2e-23 >seq425 Length=33725 Score = 123 bits (136), Expect = 2e-23 Identities = 146/195 (75%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 |||||||||||||| || || ||||| ||||| | || ||||||||||| || ||||| Sbjct 29731 TCCTTCTGAATGTTGTAATCAGAGAGAGTGCGTCCATCTTCGAGCTGCTTACCAGCGAAG 29790 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 ||||| | ||||||||| | ||||| | |||||||||| || |||| |||| || Sbjct 29791 ATCAGCCTCTGTTGGTCTGGGGGAATTCCCTCCTTGTCC-TGGATTTTGGCTTTGACATT 29849 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | |||||| | ||| ||||| | || || ||||| ||||| || || || || Sbjct 29850 TTCGATTGTGTCGGAAGCCTCTACCTCGAGGGTGATGGTTTTCCCCGTTAGGGTTTTAAC 29909 Query 41851 GAAAATCTGCATGTT 41865 || ||||||||||| Sbjct 29910 AAAGATCTGCATGTT 29924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462297978490400