Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_033829.1 Length=152388 Score E Sequences producing significant alignments: (Bits) Value seq26 266 3e-66 seq86 118 1e-21 >seq26 Length=1350929 Score = 266 bits (294), Expect = 3e-66 Identities = 547/806 (68%), Gaps = 12/806 (1%) Strand=Plus/Plus Query 129280 ATGAATGATTTAAAGAATCGTCAGATTTTGAATGGTCCCGTCGTTATACGTCGCTATGTC 129339 ||||||||||| |||||||||||| |||| ||||| | || ||| || ||| | Sbjct 652207 ATGAATGATTTGAAGAATCGTCAGTTTTTAAATGGCGCAAGTGTCATAACCCGGTATATA 652266 Query 129340 ACGTATGATTTGAAT---CGACGTAAAAAGAGTAAGATTGCTGGATGTCAGAAAATGTCT 129396 || || |||||| ||||| || || | | || ||||| ||| ||||||| | Sbjct 652267 CAATACGACTTGAATAAACGACGCAAGAAAAA-AGGA--GCTGGCTGTTTGAAAATGAGT 652323 Query 129397 ACGGTTTTCGAGACGGGCGCTCTATTCCAAGCTCTAAGCAAGAAAAATACATTTGAAACG 129456 | | ||||||| || | || || || || || | ||||||||| ||||| Sbjct 652324 GCTGCATTCGAGAATGGAACGCTCTTTCAGGCGCTCGGTAAGAAAAATTTCAACGAAACC 652383 Query 129457 GAAGAATGGTGTCGCAATTACCCACAAAATTATGATAATACTATGCATGAAGGTCGGAGC 129516 || | |||||| | ||||| || || ||||| || ||||| |||| ||||| || ||| Sbjct 652384 GAGGCTTGGTGTAGAAATTATCCCCAGAATTACGACAATACATTGCACGAAGGGCGAAGC 652443 Query 129517 AATAAAGCTGCACATCTTTTACCAAATGTAATTCGAGCGTCAAATGCGGCCGTTCGTAAT 129576 ||||| | |||| ||| | |||||||||| || || || |||| || || | ||| Sbjct 652444 AATAAGACAGCACTTCTCCTGCCAAATGTAACACGCGCCTCTAATGATGCAGTGAGAAAT 652503 Query 129577 TCAAATGCATTGTCGTTTCCAAACGATGCCATCGGTTATTATTGCCTTTTAAATACAAAA 129636 |||| ||| | | |||||| |||||| || ||| | ||| | | || || || Sbjct 652504 TCAAGTGCCCTAGCTTTTCCATCCGATGCTGTCAATTACTTCTGCATGCTCAACACTAAG 652563 Query 129637 GATTTGAAATCGGCAGGTGAACAAAACGTTTTGGCTGATTTCGTTATAATGTGCGAAGAG 129696 || |||||| || |||||||| || || | || |||| || |||||| | || Sbjct 652564 GACTTGAAAAGTGCGGGTGAACAGAATGTACTTGCCGATTATGTGATAATGAGTGAGTCA 652623 Query 129697 ACGGATCAAAAGAGTCTATTTCGTTATATTCGCAGTATATCAACTGGCAATGGTGATATT 129756 ||||||| ||| | || | || ||| | ||||| |||||||||| ||| ||| | Sbjct 652624 ACGGATCCAAAAATCCTCTATCAGTATTTATGCAGTTTATCAACTGGACGTGGAAATAAT 652683 Query 129757 TTAACAATAAATGGTTATTTAATTAATTGTCGTCGACCATGGAGTTTGGAGGATTTAGTG 129816 || | ||| ||||||| ||| ||||||| || |||| | | ||||||| | Sbjct 652684 TTGATAATCGATGGTTACATAACTAATTGTAAACGCGAGTGGAATCTCCAGGATTTGAT- 652742 Query 129817 CTAGTTAAACGTCAATTTCCG-CATGTAACTACCCAATATAATTTGCCTTATATTCGATT 129875 | | || || || || || | || || || || ||||| |||| || || || || Sbjct 652743 CAACTTGAAGGTGAAATTTGGTCACGTTACAACAAAATATTATTTACCGTACATAATGTT 652802 Query 129876 CTCAACACGGGCCAATATACCAATTAAATATTCACAACAATATGATGTGTTCTTTTCGCC 129935 | ||||| | ||||| || ||||||||| | |||| || || ||||| || || Sbjct 652803 CAGTACACGATCATCGATACCTATGAAATATTCAGACGAATACGACGTATTCTTCTCCCC 652862 Query 129936 AGCTGAAACGACGCATTTTCAAATTAAATATCCTGAAATTGACATGCTTTCAATTACGGC 129995 ||| || || | |||| | | ||||||||||| || || |||| |||| |||| Sbjct 652863 AGCGGAGACCATTCATTATAATATTAAATATCCCGAGGCAGAACTGCTGTCAACAGCGGC 652922 Query 129996 TAAAGAATTGTCTATA--CAATCATTGATAAAGACCCCACCATCCAAGAGTACAGTTTCA 130053 |||| || || ||| |||| ||| ||| || | ||||||||| ||||| Sbjct 652923 TAAACAACTGGGAATAGTGAATC--TGAGAAAAACAGCTCCATCCAAGGCAACAGTAAGT 652980 Query 130054 ATTAATAATATCAAAGGCAGTGTTGC 130079 || || ||||||||||| |||||||| Sbjct 652981 ATCAACAATATCAAAGGAAGTGTTGC 653006 Score = 210 bits (232), Expect = 2e-49 Identities = 512/770 (66%), Gaps = 28/770 (4%) Strand=Plus/Plus Query 130468 ATTTGGAATTTACGTCTACGTGCTGCATTTGGTAATCCCAATGGTGGTTGTATAGAAGAT 130527 || |||||||||||||| ||||||| ||||||||||| ||||| ||| || || ||| Sbjct 653392 ATATGGAATTTACGTCTTCGTGCTGTTTTTGGTAATCCATTTGGTGCTTGCATTGAGGAT 653451 Query 130528 GGAGTCGTTATCGATTCAAATATTTTAAAACATATACCACCAGTGTATTACAATGCTTGC 130587 || || || || ||| || | | || | || ||| | | | ||||||||| ||| Sbjct 653452 GGTGTTGTCATGGATACATCAACACTCAAGTACATTCCAAAAATATGTTACAATGCCTGC 653511 Query 130588 ATTACAGTTGAATTTACATTCAAGACTGTTAAGCATCCGAAAGACGCACGGTTCATAGCA 130647 || || | || || || |||||||| | || || |||||| ||| | ||||| Sbjct 653512 ATCACCATCGAGTTCACCTTCAAGACCATCAAACAACCGAAATCCGCCCACTTCATTAGT 653571 Query 130648 ATAGATGAATGTCATAATTCT------ATTGACGATGAGACTTTAATTGGCTGCTTAGTG 130701 ||||||| | ||| || ||||| ||||| || | ||||||||| || | Sbjct 653572 GTAGATGATTCG---AATGCTCGACGAATTGATGATGAAACGCTCATTGGCTGCATAATA 653628 Query 130702 --ACCGAACATGAGGTATATGTAAAGAATAGCAAGCATACAC-----AAGTTTTACGTCC 130754 |||| | ||||| || |||| ||||||||||| | | ||| | ||| Sbjct 653629 TCACCGTA--TGAGGCCTACATAAAAAATAGCAAGCACAGTCTGATCAAGAT----GTCA 653682 Query 130755 CGAGAAAATTGGTAGTCATTATTTTTATTTGATCAACTTTTTGCCAAAAAAGACGAAAAT 130814 || || || |||||||||| ||| | || | |||||||| || || || | || Sbjct 653683 CGT----ATCGGAAGTCATTATTACTATCTCATTCATTTTTTGCCGAAGAAAACACAGAT 653738 Query 130815 GTATGACAATTTGCACGTTCGACATATATCGAAC-GGCAACATGATAACGGTTATTATAA 130873 |||| | | || | ||| || | |||||| |||| ||||| || | || | Sbjct 653739 GTATCAGCACCTGAAGATTCATCACGT-TCGAACTGGCAGTTCGATAATAATTGTCATTA 653797 Query 130874 CGGGTCAAACTAAAGTCGATGTAATTGTTGGTTCCAAGGTAGCCAATTCATTTGGTCAAA 130933 || | ||| | || || ||| |||||||| || || ||| | ||| |||| Sbjct 653798 AAGGACGGACTGAGGTATCAGTTGTTGACGGTTCCAAAGTCGCTAATAGCTATGGACAAA 653857 Query 130934 AGAATGTCATTTCAATGGAAAAGGATTTGCGTGATTGTTGGGGTATTACCCGTGATGGTC 130993 | ||||| || || | ||| ||| |||| ||||||||||| |||||||| | Sbjct 653858 AAAATGTATGCTCTATTACCACGGACTTGTCCAATTGCTGGGGTATTACGCGTGATGGAC 653917 Query 130994 GTCGAGTTCATGCTCAAATTATATATAGCGAAGTATCATTGGTTGGTCGTGTCACTTCTG 131053 || ||| ||||| ||||| | || || |||| |||| | | || ||| | |||| Sbjct 653918 GTAAAGTACATGCGCAAATAGTGTACAGTGAAGCATCACTCCTCGGACGTACGCCGTCTG 653977 Query 131054 GTCAATTGCATTCAATGTTTATGTCCAATGAACTGGCATTCGGAATTGATGGGACAATTA 131113 | ||| | || ||| ||| || |||| |||| | || |||| | | Sbjct 653978 GACAAATTTATGACATGCTTAAATCAGATGAGTTGGCCATTGGTCCGAATGGCGAGCTCA 654037 Query 131114 TTGCACCTGTGGATTTAGTTTTGCATACACTCCATCCATATACAAATATTAAAATAATTA 131173 | || || || ||||| || | |||||||||||||| || || |||| |||| || || Sbjct 654038 TAGCTCCAGTCGATTTGGTCATTCATACACTCCATCCTTACACCAATAATAAAGTATTTG 654097 Query 131174 AAGTCAAAAACGACACGTTGACCAACATCAATGGTTTTGATTCACAAAAT 131223 | || |||| ||| ||| | ||||| || ||||| ||||||||||||||| Sbjct 654098 ATGTAAAAATCGATACGCTTACCAATATGAATGGCTTTGATTCACAAAAT 654147 >seq86 Length=530000 Score = 118 bits (130), Expect = 1e-21 Identities = 244/363 (67%), Gaps = 0/363 (0%) Strand=Plus/Minus Query 6005 ACATACGTACATGCATGTTGGTAAAATTGAAGGATCTCGTTTAACCATTACTAAATCCAA 6064 ||| || |||| ||||| | | ||||| ||||| ||||| || ||| | | ||| Sbjct 472836 ACAGACAAACATACATGTAGTTTTTATTGAGGGATCACGTTTCACACATACCAGACTCAA 472777 Query 6065 ATCATAATTCTCAGATTCTAATAAGTCGTACAGTGTTTGTGGCAACATTACCGAATAATA 6124 ||||| ||| || ||||| | ||| |||| ||||| | | || || || Sbjct 472776 GTCATATCCCTCTTTCTCCAATAAATTGTATAGTGCATGTGGTATGAGCACTTTGTAGTA 472717 Query 6125 CGGTATCAAGCATGATATTGTCGATGTTTGATATATCCCATTGGTTTCATAACCAGTTAT 6184 |||||| |||||| || || || || ||||| || || ||||| |||| || | Sbjct 472716 CGGTATTGTGCATGAAATGGTGGAAGTCTGATAAATTCCTCGCGTTTCGAAACCTGTAAC 472657 Query 6185 AGATCGACGTATAATCGACTCTTTACCACTAATATATTTTTTAATATTTGATATTGAGAA 6244 | | | | ||| |||||||| || |||| ||||| | |||||| || | || Sbjct 472656 GGCAATTCTCACCACCGAATCTTTACCGCTTTTATACTTTTTTACATTTGAAATGGCAAA 472597 Query 6245 ATTTGAAGATTCGAAGCGTTTGTATCGTTCCAATATCGCTTGTGGTGTTGTTATAACGGC 6304 ||||||| || || || |||| || ||| || || ||||| || || || Sbjct 472596 ATTTGAATCCTCAAAACGCATGTAGCGCTCCTTGGCCGTTTCAGGTGTAAGAATTACAGC 472537 Query 6305 ACGTATAAATGACATAAAATGATTATAAGATTGTTCGCGCCAAATTCTCGGATCAAATAT 6364 |||| |||||| ||||||||||| | ||||||||||||||||| | |||||| | || Sbjct 472536 GCGTAAAAATGAAATAAAATGATTGAATGATTGTTCGCGCCAAATAGTTGGATCATAAAT 472477 Query 6365 TAT 6367 || Sbjct 472476 AAT 472474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487507250135360