Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq93 91.5 2e-13 >seq93 Length=974399 Score = 91.5 bits (100), Expect = 2e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 16465 ATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGC 16524 |||| ||| || || || || | |||||||||||||||||||| | || || || || Sbjct 914949 ATCGGCTATGTATGTGTCGATTAACAAACTGTACATTTCTGAGTGAACATTTTCCATTGC 915008 Query 16525 TATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTC 16584 |||||||| ||||||||||| || || || | || || ||||| |||| ||| Sbjct 915009 AATCTGAAAGCCATAGAAGCACCGTGCTTCTGTTACCTGAACTTCTTGACTGAATCTTTC 915068 Query 16585 CGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGC 16629 | | | ||| ||||| || || || ||| |||||||| || || Sbjct 915069 CACTAAGTTTTCATTGACAATCCCATCAGAAGCAGCAAAGAAGGC 915113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511374362645160