Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_001416.1 Length=48502 Score E Sequences producing significant alignments: (Bits) Value seq1959 114 4e-21 >seq1959 Length=43063 Score = 114 bits (126), Expect = 4e-21 Identities = 99/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 46091 AGAACTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGC 46150 ||| || |||||||| || | |||| || |||||||||| || ||||| |||||||| Sbjct 9606 AGATCTTAAGCTGGCTAAGTCAACAATCACCGACATGCAGACACGCCAGCGCGATGTTGC 9665 Query 46151 TGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAGCTGAAAATGATGCTCT 46210 ||| ||||| ||||| ||||| ||||||||||||||||||||||| || ||| |||| Sbjct 9666 TGCACTCGACGCAAAGTACACAAAGGAGTTAGCTGATGCTAAAGCCAGTAACGATTCTCT 9725 Query 46211 GCG 46213 || Sbjct 9726 CCG 9728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155073265858784