Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq122 89.7 6e-13 >seq122 Length=4874392 Score = 89.7 bits (98), Expect = 6e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 145779 CAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTG 145838 ||||| | ||||||||| || ||||| |||| || || || || | |||||||| Sbjct 3442291 CAGCAAAGCGTAGCTGGCGATATTGAACGGCAGGCCGAGGAAGATATCGCAGGAGCGCTG 3442350 Query 145839 GTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGG 145898 ||||| ||||||||||||| ||| |||| |||||||||||| | | |||||| || Sbjct 3442351 ATACAGTTGGCAGGAGAGCTTGCCGTCCGCAACGTAGAACTGGAAGAACGCGTGGCACGG 3442410 Query 145899 CGGCAGGGCCAT 145910 | ||| ||||| Sbjct 3442411 GGCCAGCGCCAT 3442422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590030604362520