Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_001901.1 Length=46375 Score E Sequences producing significant alignments: (Bits) Value seq1959 93.3 1e-14 >seq1959 Length=43063 Score = 93.3 bits (102), Expect = 1e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 28654 TTAGATGTTGTCTCAAACCCCATACGGCCACGAATGAGCCACTGGAACGGAATAGTCAGC 28713 || ||||||||||| || |||| ||||||| |||||||| || ||||| ||||| Sbjct 681 TTCGATGTTGTCTCGAAGCCCACCTTTCCACGAAATAGCCACTGAAATGGAATCGTCAGG 622 Query 28714 AGGTACAGCGGAACGAACCACAAACGGTTCAGACGCTGCCAGAACGTCGCATCA 28767 || |||||||||||||||| || ||||| ||||||||||| | |||||| Sbjct 621 CAATAGAGCGGAACGAACCACATGCGATTCAGGCGCTGCCAGAATTTGGCATCA 568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148267372072022