Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq4 138 8e-28 >seq4 Length=4567600 Score = 138 bits (152), Expect = 8e-28 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 97111 AAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGC 97170 |||| || ||||| || |||||| |||| | |||| |||||| ||||||||||| || Sbjct 989157 AAATTTGTTACATGAGCTATCATATAAGTAAGGAGAGCATAGCTGGCAATGTTAAATGGG 989098 Query 97171 ACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACAC 97230 || || ||||||||||| ||||| |||||||| | ||||| || || | |||| | Sbjct 989097 ACACCCAGTCCCATATCTGCTGACCTTTGATAGAGTTGACAAGACAGTTCACCATTTGCC 989038 Query 97231 ACATAAAACTGACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGAC 97289 |||||||| || | ||| || || || || || || ||||||||||| || || | Sbjct 989037 ACATAAAATTG-CACAAGGCAATGGCAAGGCGGTAAAGCCATTTTTGGGACGTCAACAGG 988979 Query 97290 ATTCCAAGCACACATCAACATTCTTCTATC 97319 |||||| |||||||| | |||||||| || Sbjct 988978 ATTCCATGCACACATGAGAATTCTTCTGTC 988949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346757529868910