Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq93 93.3 4e-14 >seq93 Length=974399 Score = 93.3 bits (102), Expect = 4e-14 Identities = 120/161 (75%), Gaps = 6/161 (4%) Strand=Plus/Plus Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989 |||||||| || || | || || |||||||| ||||| | ||||| || || |||||| Sbjct 914956 ATGTATGTGTCGATTAACAAACTGTACATTTCTGAGTGAACATTTTCCATTGCAATCTGA 915015 Query 13990 AAACCATAAAAACATCTAGCTTCTG--ACCATTGTACCTCC-GAGTAAAATCTTTCTGCC 14046 || ||||| || || | ||||||| ||| || || || || | || |||||| | Sbjct 915016 AAGCCATAGAAGCACCGTGCTTCTGTTACC--TGAACTTCTTGACTGAA-TCTTTCCACT 915072 Query 14047 AAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGC 14087 ||||||||||| ||||| |||||| ||| ||||| || || Sbjct 915073 AAGTTTTCATTGACAATCCCATCAGAAGCAGCAAAGAAGGC 915113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478551332479320