Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq43 93.3 3e-14 >seq43 Length=2082672 Score = 93.3 bits (102), Expect = 3e-14 Identities = 154/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 33152 AACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGT 33211 || ||||| || | ||| || || ||||| || || |||||||| |||||||| || | Sbjct 901291 AAACGCAAGACAAGATGTAAAGTGGACTCCTTCTGGATATTGTAGTCAGACAAGGTGCGA 901232 Query 33212 TGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCT 33271 || || | ||||| ||| ||| || ||||| ||||| || | ||| ||||||||| Sbjct 901231 CCATCTTCAAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGATCTGGGGGGATGCCTTCT 901172 Query 33272 TT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGA 33328 || || | | | ||| ||||| | | ||| | || ||||| ||| |||||| Sbjct 901171 TTGTCTTGGATTTTGGCC---TTTACGTTCTCAATAGAATCAGAGGGTTCAACTTCCAGA 901115 Query 33329 GTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || || || || || || || || ||||| Sbjct 901114 GTAATGGTCTTGCCAGTGAGTGTCTTGACAAAGATCTGCAT 901074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318753267606174