Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_005069.1 Length=46339 Score E Sequences producing significant alignments: (Bits) Value seq1214 102 2e-17 >seq1214 Length=17919 Score = 102 bits (112), Expect = 2e-17 Identities = 90/110 (82%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 23723 ATGGCAGTCCAGGCGGAGCAGCTTTCGAGCTGGCCGGTATCCGTTGGGGCCGGTATTCCT 23782 |||| | || ||||| ||||| |||| |||||||||| ||| | |||||||||||| Sbjct 10572 ATGGTGGCCCGGGCGGGGCAGCCTTCGGGCTGGCCGGTTTCCAAGGTTGCCGGTATTCCT 10513 Query 23783 ACCTCCGTTTGGGCTGCCACCCCATAGAGTGTAGGAACTCTGGTGGTAGC 23832 ||| |||| ||||| ||| ||||| |||||||||||||| ||||||||| Sbjct 10512 ACCCCCGTCCGGGCTACCA-CCCAT-GAGTGTAGGAACTCCGGTGGTAGC 10465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148152180639806