Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq93 127 2e-24
>seq93
Length=974399
Score = 127 bits (140), Expect = 2e-24
Identities = 157/212 (74%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 13421 ATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGG 13480
|| || || || || || || || ||||||||||| |||| ||||||||| || || ||
Sbjct 914956 ATGTATGTGTCGATTAACAAACTGTACATTTCTGAGTGAACATTTTCCATTGCAATCTGA 915015
Query 13481 AAACCATAAAAACATCTAGCCTCTGATACCTGAACTTC-GGAGTAAAATCTTTCTGCTAA 13539
|| ||||| || || | || |||| |||||||||||| || | |||||||| ||||
Sbjct 915016 AAGCCATAGAAGCACCGTGCTTCTGTTACCTGAACTTCTTGACT-GAATCTTTCCACTAA 915074
Query 13540 GTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttt 13599
|||||| || || ||||| ||| ||||||||| || ||||| | || ||||| |
Sbjct 915075 GTTTTCATTGACAATCCCATCAGAAGCAGCAAAGAAGGCAAGGACATGGGAGATAAAATG 915134
Query 13600 tttttCGTTTTCTGACAACTTTAACCAATCTG 13631
||| || | | || || |||| ||||||||
Sbjct 915135 TTTCTCATCCTTTGTCAGCTTTGCCCAATCTG 915166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430949502978726
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |