Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq36 91.5 8e-14 >seq36 Length=2530450 Score = 91.5 bits (100), Expect = 8e-14 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 3902 GGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTG 3961 || || || |||||||||||||| || || || || || || || ||| || |||| | Sbjct 711731 GGATTTTCTGTTGAGGGTCAAGAGAACATTCAGGAGATTTTGTCAAAACAGCTGTACCTT 711672 Query 3962 TGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTT 4021 ||||||| | ||||| | | || | ||| || ||||| | |||| |||| | Sbjct 711671 TGTCAATTCCTGATTGCTCTTCTTATAGTGAGAACAGGCGGTCACTTTGTTTGCAAAGTA 711612 Query 4022 TTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAAT 4081 || ||| ||||||| || | ||||| |||| | ||||| |||||| | |||| ||| | Sbjct 711611 TTTGATTTATTTACTCCATGTAGTGTTGGTCTTGTGTACCTGATGTTTCGATCATTTGAA 711552 Query 4082 CGTATTTGTATTTTCAAACCACATTCATCGCGACCGGCCAATTCTGAAAG 4131 | ||| ||| ||||| || | || || || ||||| ||||| Sbjct 711551 CAACTTTCCATTCATAAACCTAATACTAGCCGTCCAGCAAATTCAGAAAG 711502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276532490577289