Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq557 113 7e-21 >seq557 Length=92906 Score = 113 bits (124), Expect = 7e-21 Identities = 86/102 (84%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||||||||| | || || || |||||||| |||||||||||||| || || Sbjct 12694 CGCCAAGCGTCATCGTAAGGTGCTGCGTGACAACATCCAGGGAATCACCAAGCCCGCCAT 12753 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGG 16533 ||||||||||||||| |||||||||||||||||| |||| || Sbjct 12754 CCGTCGTCTGGCTCGCCGTGGTGGAGTCAAGCGTATCTCCGG 12795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79069473695259